Reposted by Winston Timp
Here's the White House's proposed reorganization of NIH institutes & budgets. Details in: www.hhs.gov/sites/defaul...
May 30, 2025 at 11:55 PM
Here's the White House's proposed reorganization of NIH institutes & budgets. Details in: www.hhs.gov/sites/defaul...
Reposted by Winston Timp
Announcing myloasm, a new long-read (ONT R10/PacBio) metagenome assembler that I've been working on during my postdoc in the Heng Li lab (@lh3lh3.bsky.social).
myloasm-docs.github.io
myloasm-docs.github.io
myloasm - metagenomic assembly with (noisy) long reads
myloasm-docs.github.io
May 28, 2025 at 5:54 PM
Announcing myloasm, a new long-read (ONT R10/PacBio) metagenome assembler that I've been working on during my postdoc in the Heng Li lab (@lh3lh3.bsky.social).
myloasm-docs.github.io
myloasm-docs.github.io
Reposted by Winston Timp
Telomere-to-telomere genome sequences of six ape species: chimpanzee, bonobo, gorilla, Bornean & Sumatran orangutan, & siamang! Invaluable resource for future evolutionary studies of humans & our closest living relatives. Kateryna Makova, @aphillippy.bsky.social, Evan Eichler & co in @nature.com.🙌🧬🧪
Complete sequencing of ape genomes - Nature
Complete sequences of chromosomes telomere-to-telomere from chimpanzee, bonobo, gorilla, Bornean orangutan, Sumatran orangutan and siamang provide a comprehensive and valuable resource for future evol...
www.nature.com
April 9, 2025 at 10:06 PM
Telomere-to-telomere genome sequences of six ape species: chimpanzee, bonobo, gorilla, Bornean & Sumatran orangutan, & siamang! Invaluable resource for future evolutionary studies of humans & our closest living relatives. Kateryna Makova, @aphillippy.bsky.social, Evan Eichler & co in @nature.com.🙌🧬🧪
Reposted by Winston Timp
Long reads such as @nanoporetech.com or @pacbio.bsky.social can provide insights into epigenetic. We
@yileifu.bsky.social & @timp0.bsky.social )summarize the latest #Bioinformatics approaches & why this matters! Out now @natrevgenet.bsky.social at:
bit.ly/4cjxUtl
@bcmhouston.bsky.social @jhu.edu
@yileifu.bsky.social & @timp0.bsky.social )summarize the latest #Bioinformatics approaches & why this matters! Out now @natrevgenet.bsky.social at:
bit.ly/4cjxUtl
@bcmhouston.bsky.social @jhu.edu
April 3, 2025 at 4:01 PM
Long reads such as @nanoporetech.com or @pacbio.bsky.social can provide insights into epigenetic. We
@yileifu.bsky.social & @timp0.bsky.social )summarize the latest #Bioinformatics approaches & why this matters! Out now @natrevgenet.bsky.social at:
bit.ly/4cjxUtl
@bcmhouston.bsky.social @jhu.edu
@yileifu.bsky.social & @timp0.bsky.social )summarize the latest #Bioinformatics approaches & why this matters! Out now @natrevgenet.bsky.social at:
bit.ly/4cjxUtl
@bcmhouston.bsky.social @jhu.edu
Reposted by Winston Timp
We summarized state-of-the-art computational methods for DNA methylation analysis using long-read sequencing, covering everything from base calling to sample-level, cell-type-level, and even population-scale analysis. Huge thanks to @sedlazeck.bsky.social and @timp0.bsky.social for this great work!
New online! Computational analysis of DNA methylation from long-read sequencing
Computational analysis of DNA methylation from long-read sequencing
Nature Reviews Genetics, Published online: 28 March 2025; doi:10.1038/s41576-025-00822-5Long-read sequencing technologies can directly profile methylation modifications across the genome. In this Review, Fu et al. overview the long-read computational tools to identify and compare methylation signals, as well as tools that use these methylation signals to analyse cell-type diversity and gain additional genomic insights.
www.nature.com
March 29, 2025 at 12:07 AM
We summarized state-of-the-art computational methods for DNA methylation analysis using long-read sequencing, covering everything from base calling to sample-level, cell-type-level, and even population-scale analysis. Huge thanks to @sedlazeck.bsky.social and @timp0.bsky.social for this great work!
Reposted by Winston Timp
The abstract deadline for Biology of Genomes is a month away. We hope to see you there!
meetings.cshl.edu/meetings.asp...
meetings.cshl.edu/meetings.asp...
Biology of Genomes
Cold Spring Harbor Laboratory Meetings & Courses -- a private, non-profit institution with research programs in cancer, neuroscience, plant biology, genomics, bioinformatics.
meetings.cshl.edu
January 13, 2025 at 4:11 PM
The abstract deadline for Biology of Genomes is a month away. We hope to see you there!
meetings.cshl.edu/meetings.asp...
meetings.cshl.edu/meetings.asp...