Engelhardt Research Group
@thebeehive.bsky.social
Engelhardt Research Group at Stanford University and Gladstone Institutes. Statistical genomics, live-cell imaging, wearable data, cancer immunology, reproductive health.
Wish I were in Baltimore for this! Looks super exciting and forward thinking.
Baltimore and Hopkins friends - remember to join us for the Malone Center Symposium Monday Dec 8 in the Glass Pavilion:
Human + AI: Redefining the Standard of Care in Medicine
Human + AI: Redefining the Standard of Care in Medicine
Be sure to stop the 2025 Johns Hopkins Research Symposium on Engineering in Healthcare for our exhibition halls, collaboration and networking opportunities, and remarks from @alexisbattle.bsky.social, Chien-Ming Huang, and @moberst.bsky.social! Register now: 2025-malone-symposium.eventbrite.com
December 8, 2025 at 2:07 AM
Wish I were in Baltimore for this! Looks super exciting and forward thinking.
Last talk of this session! #NeurIPS2025
December 4, 2025 at 6:40 PM
Last talk of this session! #NeurIPS2025
First up! Nine minutes!!
December 4, 2025 at 5:51 PM
First up! Nine minutes!!
Please join us for these incredible papers and discussions with authors on important issues for the NeurIPS community 🤩
TODAY is the first-ever #NeurIPS position paper track!
Come hear thoughtful arguments about “digital heroin,” the nature of innovation, protecting privacy, machine unlearning, & how we can do ML research better as a community.
See you: ballroom 20AB from 10-11a & 3:30-4:30p!
#NeurIPS2025 #NeurIPSSD
Come hear thoughtful arguments about “digital heroin,” the nature of innovation, protecting privacy, machine unlearning, & how we can do ML research better as a community.
See you: ballroom 20AB from 10-11a & 3:30-4:30p!
#NeurIPS2025 #NeurIPSSD
December 4, 2025 at 5:25 PM
Please join us for these incredible papers and discussions with authors on important issues for the NeurIPS community 🤩
Super excited to tell you about our preprint on Neighborhood Nonnegative Matrix Factorization (NNMF) for spatially-aware dimension reduction in spatial transcriptomics, led by Ragnhild Laursen in collaboration with Karin Pelka @pelkalab.bsky.social and her lab!
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
Neighborhood nonnegative matrix factorization identifies patterns and spatially-variable genes in large-scale spatial transcriptomics data
Tissues consist of multi-cellular neighborhoods in which different cell types express correlated gene programs due to shared signaling environments. Methods for identifying these spatial neighborhoods...
www.biorxiv.org
April 29, 2025 at 10:21 PM
Super excited to tell you about our preprint on Neighborhood Nonnegative Matrix Factorization (NNMF) for spatially-aware dimension reduction in spatial transcriptomics, led by Ragnhild Laursen in collaboration with Karin Pelka @pelkalab.bsky.social and her lab!
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
Exciting update!! @bioimagearchive.bsky.social is now hosting the first publicly available Incucyte data! If you have live-cell imaging data, please consider uploading to this amazing repository!! Thanks to Julia Carnevale and Alex Marson for experimental data —
www.ebi.ac.uk/biostudies/b...
www.ebi.ac.uk/biostudies/b...
January 21, 2025 at 1:33 AM
Exciting update!! @bioimagearchive.bsky.social is now hosting the first publicly available Incucyte data! If you have live-cell imaging data, please consider uploading to this amazing repository!! Thanks to Julia Carnevale and Alex Marson for experimental data —
www.ebi.ac.uk/biostudies/b...
www.ebi.ac.uk/biostudies/b...
First post in the Good Place! Our preprint on cellular behavior analysis in TCR T cells & cancer cell live-cell imaging data is out! This 3-year collaboration led by pd Archit Verma w/ Alex Marson & Julia Carnevale, with segmentation & tracking by @davidvv & team! www.biorxiv.org/content/10.1...
Cellular behavior analysis from live-cell imaging of TCR T cell–cancer cell interactions
T cell therapies, such as chimeric antigen receptor (CAR) T cells and T cell receptor (TCR) T cells, are a growing class of anti-cancer treatments. However, expansion to novel indications and beyond l...
www.biorxiv.org
November 26, 2024 at 2:01 AM
First post in the Good Place! Our preprint on cellular behavior analysis in TCR T cells & cancer cell live-cell imaging data is out! This 3-year collaboration led by pd Archit Verma w/ Alex Marson & Julia Carnevale, with segmentation & tracking by @davidvv & team! www.biorxiv.org/content/10.1...