Steffen and Saskia Bollmann
@sbollmann.bsky.social
#MRI #fMRI #QSM #medicalimaging #open-science at QDHeC UQSchoolITEE @neurodesk.bsky.social twin-parents of Max and Pip
Reposted by Steffen and Saskia Bollmann
Extending their earlier work, Dao et al. showcase Neurodesk applications for open neuroimaging data sharing and usage: doi.org/10.52294/001...
@neurodesk.org @sbollmann.bsky.social
#OpenDatasets #SpecialIssue
@neurodesk.org @sbollmann.bsky.social
#OpenDatasets #SpecialIssue
September 26, 2025 at 7:56 PM
Extending their earlier work, Dao et al. showcase Neurodesk applications for open neuroimaging data sharing and usage: doi.org/10.52294/001...
@neurodesk.org @sbollmann.bsky.social
#OpenDatasets #SpecialIssue
@neurodesk.org @sbollmann.bsky.social
#OpenDatasets #SpecialIssue
Reposted by Steffen and Saskia Bollmann
Masson-Trottier et al. demonstrate how Neurodesk improves the transparency, portability, and sustainability of neuroimaging workflows: doi.org/10.52294/001...
@neurodesk.org @sbollmann.bsky.social
#FutureofPublishing #SpecialIssue
@neurodesk.org @sbollmann.bsky.social
#FutureofPublishing #SpecialIssue
September 19, 2025 at 2:49 PM
Masson-Trottier et al. demonstrate how Neurodesk improves the transparency, portability, and sustainability of neuroimaging workflows: doi.org/10.52294/001...
@neurodesk.org @sbollmann.bsky.social
#FutureofPublishing #SpecialIssue
@neurodesk.org @sbollmann.bsky.social
#FutureofPublishing #SpecialIssue
Reposted by Steffen and Saskia Bollmann
One more: Marshall Xu is presenting our latest updates in mapping brainstem vasculature at poster #1759, where he did some nifty image transformations + VesselBoost segmentation to get our best results yet. Take a look!
@sbollmann.bsky.social @ofgulban.bsky.social
ww6.aievolution.com/hbm2501/Abst...
@sbollmann.bsky.social @ofgulban.bsky.social
ww6.aievolution.com/hbm2501/Abst...
June 25, 2025 at 4:23 PM
One more: Marshall Xu is presenting our latest updates in mapping brainstem vasculature at poster #1759, where he did some nifty image transformations + VesselBoost segmentation to get our best results yet. Take a look!
@sbollmann.bsky.social @ofgulban.bsky.social
ww6.aievolution.com/hbm2501/Abst...
@sbollmann.bsky.social @ofgulban.bsky.social
ww6.aievolution.com/hbm2501/Abst...
Reposted by Steffen and Saskia Bollmann
Day 3 of OHBM BrainHack going strong (this photo is from yesterday btw, repeat today anyone?) with HackTrack, TrainTrack, StatsWorkshop, and @neurodesk.org !
June 23, 2025 at 12:44 AM
Day 3 of OHBM BrainHack going strong (this photo is from yesterday btw, repeat today anyone?) with HackTrack, TrainTrack, StatsWorkshop, and @neurodesk.org !
Reposted by Steffen and Saskia Bollmann
“What if installing FSL or FreeSurfer didn’t take hours — or even minutes?”
Come find out how we’ve made neuroimaging tools portable, fast, and accessible for everyone at the Neurodesk workshop at Brainhack 2025.
#Neurodesk #Brainhack #OHBM2025
@neurodesk.org
Come find out how we’ve made neuroimaging tools portable, fast, and accessible for everyone at the Neurodesk workshop at Brainhack 2025.
#Neurodesk #Brainhack #OHBM2025
@neurodesk.org
June 12, 2025 at 9:42 PM
“What if installing FSL or FreeSurfer didn’t take hours — or even minutes?”
Come find out how we’ve made neuroimaging tools portable, fast, and accessible for everyone at the Neurodesk workshop at Brainhack 2025.
#Neurodesk #Brainhack #OHBM2025
@neurodesk.org
Come find out how we’ve made neuroimaging tools portable, fast, and accessible for everyone at the Neurodesk workshop at Brainhack 2025.
#Neurodesk #Brainhack #OHBM2025
@neurodesk.org
Reposted by Steffen and Saskia Bollmann
🔁 Neurodesk helps you re-run old analyses — even years later — in exactly the same environment.
This is the power of portable reproducibility.
Try it out at our Brainhack workshop.
#Neuroimaging #Reproducibility #Brainhack2025
@neurodesk.org
This is the power of portable reproducibility.
Try it out at our Brainhack workshop.
#Neuroimaging #Reproducibility #Brainhack2025
@neurodesk.org
June 12, 2025 at 9:36 PM
🔁 Neurodesk helps you re-run old analyses — even years later — in exactly the same environment.
This is the power of portable reproducibility.
Try it out at our Brainhack workshop.
#Neuroimaging #Reproducibility #Brainhack2025
@neurodesk.org
This is the power of portable reproducibility.
Try it out at our Brainhack workshop.
#Neuroimaging #Reproducibility #Brainhack2025
@neurodesk.org
Reposted by Steffen and Saskia Bollmann
One of the exciting news for this year OHBM BrainHack is that we are bringing together like-minded events and joining up forces! @neurodesk.org will be there on June 21 for the Workshop, as well as the the 22nd with 23rd with two Hacking projects!
🧠 Join us at Brainhack 2025 in Brisbane!
We’re running a Neurodesk workshop on reproducible, portable neuroimaging workflows.
📅 21 June
🌐 Learn, hack, and contribute! 💻🌏
🔗 ohbm.github.io/hackathon202...
#Neurodesk #Brainhack2025 #Neuroimaging #OpenScience
We’re running a Neurodesk workshop on reproducible, portable neuroimaging workflows.
📅 21 June
🌐 Learn, hack, and contribute! 💻🌏
🔗 ohbm.github.io/hackathon202...
#Neurodesk #Brainhack2025 #Neuroimaging #OpenScience
June 11, 2025 at 12:06 PM
One of the exciting news for this year OHBM BrainHack is that we are bringing together like-minded events and joining up forces! @neurodesk.org will be there on June 21 for the Workshop, as well as the the 22nd with 23rd with two Hacking projects!
Reposted by Steffen and Saskia Bollmann
🧠 Join us at Brainhack 2025 in Brisbane!
We’re running a Neurodesk workshop on reproducible, portable neuroimaging workflows.
📅 21 June
🌐 Learn, hack, and contribute! 💻🌏
🔗 ohbm.github.io/hackathon202...
#Neurodesk #Brainhack2025 #Neuroimaging #OpenScience
We’re running a Neurodesk workshop on reproducible, portable neuroimaging workflows.
📅 21 June
🌐 Learn, hack, and contribute! 💻🌏
🔗 ohbm.github.io/hackathon202...
#Neurodesk #Brainhack2025 #Neuroimaging #OpenScience
June 10, 2025 at 9:28 PM
🧠 Join us at Brainhack 2025 in Brisbane!
We’re running a Neurodesk workshop on reproducible, portable neuroimaging workflows.
📅 21 June
🌐 Learn, hack, and contribute! 💻🌏
🔗 ohbm.github.io/hackathon202...
#Neurodesk #Brainhack2025 #Neuroimaging #OpenScience
We’re running a Neurodesk workshop on reproducible, portable neuroimaging workflows.
📅 21 June
🌐 Learn, hack, and contribute! 💻🌏
🔗 ohbm.github.io/hackathon202...
#Neurodesk #Brainhack2025 #Neuroimaging #OpenScience
Please sign the petition to keep the Open Science Room at OHBM: chng.it/Yd8jd8Dz6L
Preserve the Open Science Room at the Organization for Human Brain Mapping Annual Meeting
Can you spare a minute to help this campaign?
chng.it
June 9, 2025 at 10:42 PM
Please sign the petition to keep the Open Science Room at OHBM: chng.it/Yd8jd8Dz6L
Reposted by Steffen and Saskia Bollmann
🚨 BrainHack is BACK for #OHBM2025 🧠✨ In addition to the Hackathon, this year will feature two brand new workshops: how to use NeuroDesk; and how to use the latest neuroimaging statistics
📍The Precinct, Brisbane
📅June 21–23, 2025
Details in the link, sign up today!
ohbm.github.io/hackathon2025/
📍The Precinct, Brisbane
📅June 21–23, 2025
Details in the link, sign up today!
ohbm.github.io/hackathon2025/
OHBM Hackathon 2025
ohbm.github.io
June 2, 2025 at 5:52 AM
🚨 BrainHack is BACK for #OHBM2025 🧠✨ In addition to the Hackathon, this year will feature two brand new workshops: how to use NeuroDesk; and how to use the latest neuroimaging statistics
📍The Precinct, Brisbane
📅June 21–23, 2025
Details in the link, sign up today!
ohbm.github.io/hackathon2025/
📍The Precinct, Brisbane
📅June 21–23, 2025
Details in the link, sign up today!
ohbm.github.io/hackathon2025/
Reposted by Steffen and Saskia Bollmann
🔍 Includes:
✅ Multi-site, multi-contrast MRI data
✅ Manually corrected segmentations of 5 key tongue muscles
✅ Phenotypic data (age, sex, height, weight, muscle volumes)
This resource is perfect for researchers in imaging, ML, speech, and more!
✅ Multi-site, multi-contrast MRI data
✅ Manually corrected segmentations of 5 key tongue muscles
✅ Phenotypic data (age, sex, height, weight, muscle volumes)
This resource is perfect for researchers in imaging, ML, speech, and more!
May 14, 2025 at 12:50 PM
🔍 Includes:
✅ Multi-site, multi-contrast MRI data
✅ Manually corrected segmentations of 5 key tongue muscles
✅ Phenotypic data (age, sex, height, weight, muscle volumes)
This resource is perfect for researchers in imaging, ML, speech, and more!
✅ Multi-site, multi-contrast MRI data
✅ Manually corrected segmentations of 5 key tongue muscles
✅ Phenotypic data (age, sex, height, weight, muscle volumes)
This resource is perfect for researchers in imaging, ML, speech, and more!
Reposted by Steffen and Saskia Bollmann
🚨 New Open Dataset Alert! 👅
We've just published a data descriptor in Scientific Data introducing the first open, annotated MRI dataset of tongue musculature, including T1- and T2-weighted images from 47 non-neurodegenerative "healthy" participants across 3 studies!
📄 Check it out: rdcu.be/el0hW
We've just published a data descriptor in Scientific Data introducing the first open, annotated MRI dataset of tongue musculature, including T1- and T2-weighted images from 47 non-neurodegenerative "healthy" participants across 3 studies!
📄 Check it out: rdcu.be/el0hW
An Annotated Multi-Site and Multi-Contrast Magnetic Resonance Imaging Dataset for the study of the Human Tongue Musculature
Scientific Data - An Annotated Multi-Site and Multi-Contrast Magnetic Resonance Imaging Dataset for the study of the Human Tongue Musculature
rdcu.be
May 14, 2025 at 12:50 PM
🚨 New Open Dataset Alert! 👅
We've just published a data descriptor in Scientific Data introducing the first open, annotated MRI dataset of tongue musculature, including T1- and T2-weighted images from 47 non-neurodegenerative "healthy" participants across 3 studies!
📄 Check it out: rdcu.be/el0hW
We've just published a data descriptor in Scientific Data introducing the first open, annotated MRI dataset of tongue musculature, including T1- and T2-weighted images from 47 non-neurodegenerative "healthy" participants across 3 studies!
📄 Check it out: rdcu.be/el0hW
Looking forward to be talking about this at ISMRM :) I will be there from Saturday to Tuesday and keen to talk about this and everything else Neurodesk!
Neurodesk now integrates with Siemens OpenRecon :) Bring your image processing pipeline to the MRI scanner and accelerate clinical translation. This will be presented at ISMRM 2025 on Monday, 12th of May, 10am at the Siemens Booth, 4pm at poster 1962 and at the MAGNETOM User Meeting.
May 1, 2025 at 5:45 AM
Looking forward to be talking about this at ISMRM :) I will be there from Saturday to Tuesday and keen to talk about this and everything else Neurodesk!
Reposted by Steffen and Saskia Bollmann
Neurodesk now integrates with Siemens OpenRecon :) Bring your image processing pipeline to the MRI scanner and accelerate clinical translation. This will be presented at ISMRM 2025 on Monday, 12th of May, 10am at the Siemens Booth, 4pm at poster 1962 and at the MAGNETOM User Meeting.
May 1, 2025 at 5:43 AM
Neurodesk now integrates with Siemens OpenRecon :) Bring your image processing pipeline to the MRI scanner and accelerate clinical translation. This will be presented at ISMRM 2025 on Monday, 12th of May, 10am at the Siemens Booth, 4pm at poster 1962 and at the MAGNETOM User Meeting.
Reposted by Steffen and Saskia Bollmann
For those interested in brain visualisations and open science practices refer to this amazing webinar series by the OHBM Australia community hosted by @natashaltaylor.bsky.social.
Featured speakers:
@sidchop.bsky.social
@sinamansourl.bsky.social
@sbollmann.bsky.social
youtube.com/watch?v=RTy5...
Featured speakers:
@sidchop.bsky.social
@sinamansourl.bsky.social
@sbollmann.bsky.social
youtube.com/watch?v=RTy5...
2024 Webinar Series: Open Science Practices for Neuroimaging
YouTube video by OHBM Australia
youtube.com
April 2, 2025 at 10:28 PM
For those interested in brain visualisations and open science practices refer to this amazing webinar series by the OHBM Australia community hosted by @natashaltaylor.bsky.social.
Featured speakers:
@sidchop.bsky.social
@sinamansourl.bsky.social
@sbollmann.bsky.social
youtube.com/watch?v=RTy5...
Featured speakers:
@sidchop.bsky.social
@sinamansourl.bsky.social
@sbollmann.bsky.social
youtube.com/watch?v=RTy5...
Reposted by Steffen and Saskia Bollmann
Recognize your outstanding colleagues and postdoctoral colleagues doing exciting work in the field and contributing to the neuroscience community inside and outside the lab. Nominate them for our “Rising stars in neuroscience” 2025: thetransmitter.org/risingstars
#neuroskyence
#neuroskyence
March 21, 2025 at 5:34 PM
Recognize your outstanding colleagues and postdoctoral colleagues doing exciting work in the field and contributing to the neuroscience community inside and outside the lab. Nominate them for our “Rising stars in neuroscience” 2025: thetransmitter.org/risingstars
#neuroskyence
#neuroskyence
Reposted by Steffen and Saskia Bollmann
OHBM Brainhack 2025 – Register today! Exactly three months from now, we at OSSIG will bring you the OHBM Brainhack, and this time we will be joined by the @neurodesk.bsky.social and the Neuroimaging Statistics Workshops ! 🙂🧠 @ohbmofficial.bsky.social
March 22, 2025 at 11:32 AM
OHBM Brainhack 2025 – Register today! Exactly three months from now, we at OSSIG will bring you the OHBM Brainhack, and this time we will be joined by the @neurodesk.bsky.social and the Neuroimaging Statistics Workshops ! 🙂🧠 @ohbmofficial.bsky.social
Reposted by Steffen and Saskia Bollmann
Hi Australian Researchers. I have a plan. Let's thank the amazing @arc-tracker.bsky.social for a decade of selfless work by nominating them for a Eureka Prize (Leadership in science). Are you with me? If so, repost this. Please also reply and state your support for this quest. We can do this people.
February 4, 2025 at 6:12 AM
Hi Australian Researchers. I have a plan. Let's thank the amazing @arc-tracker.bsky.social for a decade of selfless work by nominating them for a Eureka Prize (Leadership in science). Are you with me? If so, repost this. Please also reply and state your support for this quest. We can do this people.
Reposted by Steffen and Saskia Bollmann
Check out the schedule of events linked with OHBM 2025
- Brain connectivity workshop, June 20-22
- Hackathon, June 21-23
- Neurodesk, June 21
- Brain gradients, June 23
- Precision network therapeutics, June 29
Register now!
We look forward to welcoming you to Brisbane!
@ohbmofficial.bsky.social
- Brain connectivity workshop, June 20-22
- Hackathon, June 21-23
- Neurodesk, June 21
- Brain gradients, June 23
- Precision network therapeutics, June 29
Register now!
We look forward to welcoming you to Brisbane!
@ohbmofficial.bsky.social
February 3, 2025 at 3:08 AM
Check out the schedule of events linked with OHBM 2025
- Brain connectivity workshop, June 20-22
- Hackathon, June 21-23
- Neurodesk, June 21
- Brain gradients, June 23
- Precision network therapeutics, June 29
Register now!
We look forward to welcoming you to Brisbane!
@ohbmofficial.bsky.social
- Brain connectivity workshop, June 20-22
- Hackathon, June 21-23
- Neurodesk, June 21
- Brain gradients, June 23
- Precision network therapeutics, June 29
Register now!
We look forward to welcoming you to Brisbane!
@ohbmofficial.bsky.social
Reposted by Steffen and Saskia Bollmann
The MRItogether 2024 videos are online :)
1. Neurodesk's development journey and lessons learned: www.youtube.com/watch?v=KJh_...
2. Neurodesk overview and live demo: www.youtube.com/watch?v=B7Gm...
3. how data can be converted into BIDS using Neurodesk: www.youtube.com/watch?v=uXrg...
1. Neurodesk's development journey and lessons learned: www.youtube.com/watch?v=KJh_...
2. Neurodesk overview and live demo: www.youtube.com/watch?v=B7Gm...
3. how data can be converted into BIDS using Neurodesk: www.youtube.com/watch?v=uXrg...
MRITogether2024-S3T3: Development journey of the Neurodesk platform
YouTube video by ESMRMB
www.youtube.com
January 24, 2025 at 12:10 AM
The MRItogether 2024 videos are online :)
1. Neurodesk's development journey and lessons learned: www.youtube.com/watch?v=KJh_...
2. Neurodesk overview and live demo: www.youtube.com/watch?v=B7Gm...
3. how data can be converted into BIDS using Neurodesk: www.youtube.com/watch?v=uXrg...
1. Neurodesk's development journey and lessons learned: www.youtube.com/watch?v=KJh_...
2. Neurodesk overview and live demo: www.youtube.com/watch?v=B7Gm...
3. how data can be converted into BIDS using Neurodesk: www.youtube.com/watch?v=uXrg...
Reposted by Steffen and Saskia Bollmann
WORKSHOP WEDNESAY: Call for Late-Breaking Abstracts
Did you miss the abstract submission window for the ISMRM Joint Workshop of the Ultra-High Field MR & Brain Function Study Groups? Submit yours now! ow.ly/pc0o50UKATI
REGISTER for the workshop: ow.ly/6iW450UKATE
#ISMRM #ISMRT #MR #MedicalImaging
Did you miss the abstract submission window for the ISMRM Joint Workshop of the Ultra-High Field MR & Brain Function Study Groups? Submit yours now! ow.ly/pc0o50UKATI
REGISTER for the workshop: ow.ly/6iW450UKATE
#ISMRM #ISMRT #MR #MedicalImaging
January 22, 2025 at 7:21 PM
WORKSHOP WEDNESAY: Call for Late-Breaking Abstracts
Did you miss the abstract submission window for the ISMRM Joint Workshop of the Ultra-High Field MR & Brain Function Study Groups? Submit yours now! ow.ly/pc0o50UKATI
REGISTER for the workshop: ow.ly/6iW450UKATE
#ISMRM #ISMRT #MR #MedicalImaging
Did you miss the abstract submission window for the ISMRM Joint Workshop of the Ultra-High Field MR & Brain Function Study Groups? Submit yours now! ow.ly/pc0o50UKATI
REGISTER for the workshop: ow.ly/6iW450UKATE
#ISMRM #ISMRT #MR #MedicalImaging
We have a fully funded PhD position available, application deadline is 8th Jan 2025: study.uq.edu.au/study-option...
This project will develop methodologies and standards for defining reproducible, benchmarked analysis pipelines and integrating them in Neurodesk.org and Brainlife.io
This project will develop methodologies and standards for defining reproducible, benchmarked analysis pipelines and integrating them in Neurodesk.org and Brainlife.io
December 11, 2024 at 3:25 AM
We have a fully funded PhD position available, application deadline is 8th Jan 2025: study.uq.edu.au/study-option...
This project will develop methodologies and standards for defining reproducible, benchmarked analysis pipelines and integrating them in Neurodesk.org and Brainlife.io
This project will develop methodologies and standards for defining reproducible, benchmarked analysis pipelines and integrating them in Neurodesk.org and Brainlife.io
Reposted by Steffen and Saskia Bollmann
#MRITogether has an amazing line-up and super interesting sessions! The next one on MRI toolboxes is just about to start.
#MRITogether Day 2 (2/2) program is also full of excellent speakers, including my new supervisor @martinhebart.bsky.social 😆
Please join us in this free, fantastic event! Even if it is just to attend a session, make sure you register to access our webinar: mritogether.esmrmb.org/24m/registra...
Please join us in this free, fantastic event! Even if it is just to attend a session, make sure you register to access our webinar: mritogether.esmrmb.org/24m/registra...
December 4, 2024 at 11:03 PM
#MRITogether has an amazing line-up and super interesting sessions! The next one on MRI toolboxes is just about to start.
The latest episode of Andy Jahn's BrainCast covers how www.Neurodesk.org was developed, how it is currently used, and what its prospects are for making neuroimaging data analysis more accessible and reproducible. YouTube: www.youtube.com/watch?v=U_6_... Spotify: open.spotify.com/episode/57vT...
Neuroimaging, Reproducibility, and Neurodesk | Steffen Bollmann (Andy's BrainCast #003)
YouTube video by Andrew Jahn
www.youtube.com
December 2, 2024 at 11:22 PM
The latest episode of Andy Jahn's BrainCast covers how www.Neurodesk.org was developed, how it is currently used, and what its prospects are for making neuroimaging data analysis more accessible and reproducible. YouTube: www.youtube.com/watch?v=U_6_... Spotify: open.spotify.com/episode/57vT...
Reposted by Steffen and Saskia Bollmann
#MRITogether Last but not least, we will wrap up day 4 (2/2) with several speakers discussing their experience with sustainable volunteering in open science initiatives. Looking forward to that!
Join us and register here: mritogether.esmrmb.org/24m/registra...
Join us and register here: mritogether.esmrmb.org/24m/registra...
December 2, 2024 at 8:17 AM
#MRITogether Last but not least, we will wrap up day 4 (2/2) with several speakers discussing their experience with sustainable volunteering in open science initiatives. Looking forward to that!
Join us and register here: mritogether.esmrmb.org/24m/registra...
Join us and register here: mritogether.esmrmb.org/24m/registra...