Peer Community Journal
@peercomjournal.bsky.social
A community-based, diamond open-access journal publishing only articles recommended by @peercommunityin.bsky.social. ISSN 2804-3871
https://peercommunityjournal.org/
https://peercommunityjournal.org/
Now published in Peer Community Journal, Mathematical and #Computationalbiology section: Simulating transgenerational hologenomes under selection with RITHMS
Simulating transgenerational hologenomes under selection with RITHMS
Pety, Solène 1 , 2 ; David, Ingrid 3 ; Rau, Andrea 2 ; Mariadassou, Mahendra 1 1 Université Paris-Saclay, INRAE, MaIAGE, 78350, Jouy-en-Josas, France 2 Université Paris-Saclay, INRAE, GABI, 78350,…
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December 19, 2025 at 11:01 AM
Now published in Peer Community Journal, Mathematical and #Computationalbiology section: Simulating transgenerational hologenomes under selection with RITHMS
Now published in Peer Community Journal, #archaeology section: Digital surface models of crops used in archaeological feature detection – a case study of Late Neolithic site Tomašanci-Dubrava in Eastern Croatia
Digital surface models of crops used in archaeological feature detection – a case study of Late Neolithic site Tomašanci-Dubrava in Eastern Croatia
Sosic Klindzic , Rajna 1 ; Vuković, Miroslav 1 ; Kalafatić, Hrvoje 2 ; Šiljeg, Bartul 2 1 University of Zagreb, Faculty of Humanities and Social Sciences, Zagreb, Croatia 2 Institute of Archaeology,…
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December 17, 2025 at 11:00 AM
Now published in Peer Community Journal, #archaeology section: Digital surface models of crops used in archaeological feature detection – a case study of Late Neolithic site Tomašanci-Dubrava in Eastern Croatia
Now published in Peer Community Journal, #genomics section #JOBIM conference: localScore: an R package to highlight optimal and suboptimal segments in a sequence with associated p-values computation
localScore: an R package to highlight optimal and suboptimal segments in a sequence with associated p-values computation
Robelin, David 1 ; Déjean, Sébastien 2 ; Mercier, Sabine 2 1 INRAE, INPT, ENVT, Université de Toulouse, GenPhySE UMR 1388, Castanet-Tolosan, France 2 Université de Toulouse, UT2J, UT Capitole, INUC,…
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December 17, 2025 at 11:00 AM
Now published in Peer Community Journal, #evolutionarybiology section: The effects of host phylogenetic coverage and congruence metric on Monte Carlo-based null models of phylosymbiosis
The effects of host phylogenetic coverage and congruence metric on Monte Carlo-based null models of phylosymbiosis
DuBose, James G.1 1 Department of Biology, Emory University, Atlanta, Georgia, USA
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December 16, 2025 at 11:00 AM
Now published in Peer Community Journal, #evolutionarybiology section: The effects of host phylogenetic coverage and congruence metric on Monte Carlo-based null models of phylosymbiosis
Now published in Peer Community Journal, #archaeology section: Detection of temporal changes of the Omega House at the Athenian Agora
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Detection of temporal changes of the Omega House at the Athenian Agora
Panagiotopoulou, Antigoni1 ; Wallace, Colin A. B. 2 ; Ragia, Lemonia3 ; Moullou , Dorina 4 1 Dep. of Electrical and Electronics Engineering Educators, School of Pedagogical and Technological…
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December 15, 2025 at 12:27 PM
Now published in Peer Community Journal, #archaeology section: Detection of temporal changes of the Omega House at the Athenian Agora
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Now published in Peer Community Journal, #ecology section: Disentangling urbanisation, climate effects and their interaction on ornamental colourations
Disentangling urbanisation, climate effects and their interaction on ornamental colourations
Sandmeyer, Lisa1 ; López-Idiáquez, David1, 2 ; Fargevieille, Amélie1 ; Giovannini, Pablo1; Perret, Samuel1; Del Rey, Maria1 ; Charmantier, Anne1 ; Doutrelant, Claire1 ; Grégoire, Arnaud1 1 CEFE,…
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December 9, 2025 at 11:01 AM
Now published in Peer Community Journal, #ecology section: Disentangling urbanisation, climate effects and their interaction on ornamental colourations
Now published in Peer Community Journal, #genomics section: Bulk-based hypothesis weighing increases power in single-cell differential expression analysis
Bulk-based hypothesis weighing increases power in single-cell differential expression analysis
Germain, Pierre-Luc1, 2 ; Wang, Jiayi2, 3 ; Robinson, Mark D.2, 3 1 D-HEST Institute for Neuroscience, ETH Zurich, Switzerland 2 Department of Molecular Life Sciences, University of Zurich, Zurich,…
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December 8, 2025 at 11:00 AM
Now published in Peer Community Journal, #genomics section: Bulk-based hypothesis weighing increases power in single-cell differential expression analysis
Reposted by Peer Community Journal
PCI Statistics and Machine Learning (@pcistatml.bsky.social) is now open for submissions!!
statml.peercommunityin.org
For an updated list of all the thematic PCIs, visit peercommunityin.org/current-pcis/
statml.peercommunityin.org
For an updated list of all the thematic PCIs, visit peercommunityin.org/current-pcis/
PCI Statistics and Machine Learning
Peer Community in Statistics and Machine Learning
statml.peercommunityin.org
December 8, 2025 at 8:53 AM
PCI Statistics and Machine Learning (@pcistatml.bsky.social) is now open for submissions!!
statml.peercommunityin.org
For an updated list of all the thematic PCIs, visit peercommunityin.org/current-pcis/
statml.peercommunityin.org
For an updated list of all the thematic PCIs, visit peercommunityin.org/current-pcis/
Now published in Peer Community Journal, #archaeology section: Isobiography of the first farmers: effects of age-estimating referential and statistical models on reconstructing infant life from dentinal isotopic sequences
Isobiography of the first farmers: effects of age-estimating referential and statistical models on reconstructing infant life from dentinal isotopic sequences
Bédécarrats, Samuel1 ; Le Roy, Mélie2 ; Sayle, Kerry L.3 ; Blaizot, Frédérique4 ; Couvrat, Maëlle1 ; Gleize, Yves5, 6 ; Leduc, Guillaume7 ; Rottier, Stéphane6 ; Goude, Gwenaëlle1 1 CNRS, Aix…
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December 5, 2025 at 12:03 PM
Now published in Peer Community Journal, #archaeology section: Isobiography of the first farmers: effects of age-estimating referential and statistical models on reconstructing infant life from dentinal isotopic sequences
Now published in Peer Community Journal, #evolutionarybiology section: Increased clonality and genetic differentiation across the Arctic Ocean in tetraploid sea anemone Aulactinia stella
Increased clonality and genetic differentiation across the Arctic Ocean in tetraploid sea anemone Aulactinia stella
Bocharova, Ekaterina1, 2 ; Volkov, Aleksandr3 ; Stoeckel, Solenn4, 5 1 Faculty of Life Sciences, University of Vienna, Vienna, Austria 2 Vavilov Institute of General Genetics of Russian Academy of…
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December 5, 2025 at 11:01 AM
Now published in Peer Community Journal, #evolutionarybiology section: Increased clonality and genetic differentiation across the Arctic Ocean in tetraploid sea anemone Aulactinia stella
Now published in Peer Community Journal, #animalscience section: GrAnnoT, a tool for efficient and reliable annotation transfer through pangenome graph
GrAnnoT, a tool for efficient and reliable annotation transfer through pangenome graph
Marthe, Nina1 ; Zytnicki, Matthias2 ; Sabot, François1 1 DIADE unit, UM, Cirad, IRD, Montpellier, France 2 MIAT, INRAE, Auzeville-Tolosane, France
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December 4, 2025 at 11:01 AM
Now published in Peer Community Journal, #animalscience section: GrAnnoT, a tool for efficient and reliable annotation transfer through pangenome graph
Now published in Peer Community Journal, #animalscience section: The future of systems genetics in farm animal sciences, a route out of the data jungle
The future of systems genetics in farm animal sciences, a route out of the data jungle
Devailly, Guillaume1 ; Eynard, Sonia E1 ; Cerutti, Chloé1 ; Durante, Arthur1 ; Hubert, Jean-Noël1 ; Karami, Keyvan1 ; Maillard, Noémien1 ; Milan, Denis1 ; Perret, Mathilde1 ; Pitel, Frédérique1 ;…
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December 3, 2025 at 11:01 AM
Now published in Peer Community Journal, #animalscience section: The future of systems genetics in farm animal sciences, a route out of the data jungle
Now published in Peer Community Journal, #infections section: Interaction dynamics of Borrelia afzelii and tick-borne encephalitis virus in C3H mice: insights into immune response
Interaction dynamics of Borrelia afzelii and tick-borne encephalitis virus in C3H mice: insights into immune response
Porcelli, Stefania1; Le Roux, Delphine1; Heckmann, Aurélie1; Galon, Clémence1; Mateos-Hernandez, Lourdes1; Šimo, Ladislav1; Cabezas-Cruz, Alejandro1; Lagrée, Anne-Claire1; Karadjian, Grégory1;…
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December 2, 2025 at 11:00 AM
Now published in Peer Community Journal, #infections section: Interaction dynamics of Borrelia afzelii and tick-borne encephalitis virus in C3H mice: insights into immune response
Now published in Peer Community Journal, #ecology section: Over the hills and far away: linking landscape factors with cavity excavation on living forest trees by the Black Woodpecker (Dryocopus martius, L. 1758)
Over the hills and far away: linking landscape factors with cavity excavation on living forest trees by the Black Woodpecker (Dryocopus martius, L. 1758)
Cabrera, Cedric1; Monnet, Jean-Matthieu1 ; Boutteaux, Jean-Jacques2; Doutau, Baptiste3; Denis, Pascal4; Paillet, Yoan1 1 Univ. Grenoble Alpes, INRAE, Lessem, 2 rue de la Papeterie, 38400 Saint-Martin…
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December 1, 2025 at 1:00 PM
Now published in Peer Community Journal, #ecology section: Over the hills and far away: linking landscape factors with cavity excavation on living forest trees by the Black Woodpecker (Dryocopus martius, L. 1758)
Now published in PCJ, 1st article in the new #psychology section: Exploring potential bidirectional causality between psychotic experiences and religiosity in a UK longitudinal cohort study (ALSPAC).https://peercommunityjournal.org/articles/10.24072/pcjournal.654/
Exploring potential bidirectional causality between psychotic experiences and religiosity in a UK longitudinal cohort study (ALSPAC)
Obo, Grace1 ; Golding, Jean1 ; Zammit, Stanley2, 3, 4 ; Jones, Hannah J2, 4 ; Halstead, Isaac1 ; Major-Smith, Daniel1, 5 1 Centre for Academic Child Health, Population Health Sciences, Bristol…
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December 1, 2025 at 12:32 PM
Now published in PCJ, 1st article in the new #psychology section: Exploring potential bidirectional causality between psychotic experiences and religiosity in a UK longitudinal cohort study (ALSPAC).https://peercommunityjournal.org/articles/10.24072/pcjournal.654/
Now published in Peer Community Journal, #ecology section: Spatio-temporal dynamics of attacks around deaths of wolves: A statistical assessment of lethal control efficiency in France
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Spatio-temporal dynamics of attacks around deaths of wolves: A statistical assessment of lethal control efficiency in France
Grente, Oksana1, 2 ; Opitz, Thomas3 ; Duchamp, Christophe2 ; Drouet-Hoguet, Nolwenn4 ; Chamaillé-Jammes, Simon1 ; Gimenez, Olivier1 1 CEFE, Univ Montpellier, CNRS, EPHE, IRD, Montpellier, France 2…
peercommunityjournal.org
November 21, 2025 at 1:03 PM
Now published in Peer Community Journal, #ecology section: Spatio-temporal dynamics of attacks around deaths of wolves: A statistical assessment of lethal control efficiency in France
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Now published in Peer Community Journal, #evolutionarybiology section: A gene-regulatory network model for density-dependent and sex-biased dispersal evolution during range expansions
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A gene-regulatory network model for density-dependent and sex-biased dispersal evolution during range expansions
Deshpande, Jhelam N.1, 2 ; Fronhofer, Emanuel A.1 1 ISEM, Université de Montpellier, CNRS, IRD, EPHE, Montpellier, France 2 Indian Institute of Science Education and Research (IISER) Pune, Pune,…
peercommunityjournal.org
November 18, 2025 at 1:00 PM
Now published in Peer Community Journal, #evolutionarybiology section: A gene-regulatory network model for density-dependent and sex-biased dispersal evolution during range expansions
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Now published in Peer Community Journal, #animalscience section: Dynamic sensitivity analysis of a mathematical model describing the effect of the macroalgae Asparagopsis taxiformis on rumen fermentation and methane production under in vitro continuous conditions
Dynamic sensitivity analysis of a mathematical model describing the effect of the macroalgae Asparagopsis taxiformis on rumen fermentation and methane production under in vitro continuous conditions
Blondiaux, Paul1 ; Kiessé, Tristan Senga2 ; Eugène, Maguy3 ; Muñoz-Tamayo, Rafael1 1 Université Paris-Saclay, INRAE, AgroParisTech, UMR Modélisation Systémique Appliquée aux Ruminants, 91120,…
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November 17, 2025 at 11:02 AM
Now published in Peer Community Journal, #animalscience section: Dynamic sensitivity analysis of a mathematical model describing the effect of the macroalgae Asparagopsis taxiformis on rumen fermentation and methane production under in vitro continuous conditions
Now published in Peer Community Journal, #archaeology section: Rethinking Caribbean Archaeology: Towards an ethical position for a truly decolonial practice
Rethinking Caribbean Archaeology: Towards an ethical position for a truly decolonial practice
Herrera Malatesta, Eduardo1 ; Fricke, Felicia J.2 ; de Waal, Maaike1 ; Seferidou, Eleni3 ; Cunningham, Andreana4 ; Nägele, Kathrin3 ; Victorina, Amy5; kok, marjolijn6; Chiappa, Oriana7, 8 ; Farmer,…
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November 14, 2025 at 11:00 AM
Now published in Peer Community Journal, #archaeology section: Rethinking Caribbean Archaeology: Towards an ethical position for a truly decolonial practice
Now published in PCJ #ecotoxicology and #environmentalchemistry: Investigation of the combined influence of salinity and particle concentration on the adsorption of anionic and zwitterionic PFAS onto estuarine sediment using the RSM modelling approach
Investigation of the combined influence of salinity and particle concentration on the adsorption of anionic and zwitterionic PFAS onto estuarine sediment using the RSM modelling approach
Gao, Chan1; Budzinski, Hélène1 ; Pardon, Patrick1 ; Le Menach, Karyn1; Labadie, Pierre1 1 Univ. Bordeaux, CNRS, Bordeaux INP, EPOC, UMR 5805, F-33600 Pessac, France
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November 13, 2025 at 11:00 AM
Now published in PCJ #ecotoxicology and #environmentalchemistry: Investigation of the combined influence of salinity and particle concentration on the adsorption of anionic and zwitterionic PFAS onto estuarine sediment using the RSM modelling approach
Now published in Peer Community Journal, #evolutionarybiology section: Asymmetric performance in early life stages of hybrid Argiope bruennichi
Asymmetric performance in early life stages of hybrid Argiope bruennichi
Franke, Sebastian1 ; Volquardsen, Alina1; Schneider, Jutta M.1 1 Department of Biology, University of Hamburg, Germany
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November 11, 2025 at 11:01 AM
Now published in Peer Community Journal, #evolutionarybiology section: Asymmetric performance in early life stages of hybrid Argiope bruennichi
Now published in Peer Community Journal, #ecology section: Unravelling the effects of heterogeneity in space use on estimates of connectivity and population size: Insights from spatial capture-recapture modelling
Unravelling the effects of heterogeneity in space use on estimates of connectivity and population size: Insights from spatial capture-recapture modelling
Kervellec, Maëlis1 ; Gimenez, Olivier1 ; Vanpé, Cécile2 ; Quenette, Pierre-Yves2 ; Sentilles, Jérôme2; Palazón, Santiago3; Afonso Jordana, Ivan4; Jato, Ramón5; Elósegui Irurtia, Miguel Mari6;…
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November 10, 2025 at 11:01 AM
Now published in Peer Community Journal, #ecology section: Unravelling the effects of heterogeneity in space use on estimates of connectivity and population size: Insights from spatial capture-recapture modelling
Now published in Peer Community Journal, #infections section: Green cities and the risk for vector-borne disease transmission for humans and animals: a scoping review
Green cities and the risk for vector-borne disease transmission for humans and animals: a scoping review
Mercat, Mathilde1 ; Bartholomee, Colombine1 ; Fournet, Florence1 ; Alcover Amengual, Magdalena2 ; Bourquia, Maria3 ; Bouhsira, Emilie4 ; Cornel, Anthony5 ; Fernandez-Cassi, Xavier2 ; Fontenille,…
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November 7, 2025 at 11:01 AM
Now published in Peer Community Journal, #infections section: Green cities and the risk for vector-borne disease transmission for humans and animals: a scoping review
Now published in Peer Community Journal, #microbiology section:
Family life and cadmium ingestion independently shape offspring microbiomes in a subsocial insect
Family life and cadmium ingestion independently shape offspring microbiomes in a subsocial insect
Family life and cadmium ingestion independently shape offspring microbiomes in a subsocial insect
Cheutin, Marie-Charlotte1 ; Honorio, Romain1, 2 ; Meunier, Joël1 1 Institut de Recherche sur la Biologie de l’Insecte, UMR 7261, CNRS, University of Tours, Tours, France 2 Laboratoire d’Ethologie…
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November 6, 2025 at 11:00 AM
Now published in Peer Community Journal, #microbiology section:
Family life and cadmium ingestion independently shape offspring microbiomes in a subsocial insect
Family life and cadmium ingestion independently shape offspring microbiomes in a subsocial insect
Now published in Peer Community Journal, #archaeology section: Convolutional neural networks and outline analyses for archaeobotanical studies of domestication and subspecific identification
Convolutional neural networks and outline analyses for archaeobotanical studies of domestication and subspecific identification
Bonhomme, Vincent1, 2 ; Bouby, Laurent1 ; Claude, Julien1, 3 ; Dham, Camille1; Gros-Balthazard, Muriel4 ; Ivorra, Sarah1 ; Jeanty, Angèle1 ; Pagnoux, Clémence5 ; Pastor, Thierry1; Terral,…
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November 5, 2025 at 11:02 AM
Now published in Peer Community Journal, #archaeology section: Convolutional neural networks and outline analyses for archaeobotanical studies of domestication and subspecific identification