Griffin Chure
@gchure.bsky.social
A computational scientist building tools for AI-enabled biological discovery Profluent Bio. https://gchure.github.io
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Griffin Chure
@gchure.bsky.social
· Apr 25
Paradox of the Sub‐Plankton: Plausible Mechanisms and Open Problems Underlying Strain‐Level Diversity in Microbial Communities
“Paradox of the sub-plankton: Plausible mechanisms and open problems underlying strain-level diversity in microbial communities” by Akshit Goyal* and Griffin Chure*. This work highlights the limitati...
doi.org
Happy to have this out there! I had a lot of fun working with (and learning from) @akshitg.bsky.social on this mini-review on microdiversity in microbial populations and how current ecological theory fails to quantitatively explain the observations. doi.org/10.1111/1462...
Happy to have this out there! I had a lot of fun working with (and learning from) @akshitg.bsky.social on this mini-review on microdiversity in microbial populations and how current ecological theory fails to quantitatively explain the observations. doi.org/10.1111/1462...
Paradox of the Sub‐Plankton: Plausible Mechanisms and Open Problems Underlying Strain‐Level Diversity in Microbial Communities
“Paradox of the sub-plankton: Plausible mechanisms and open problems underlying strain-level diversity in microbial communities” by Akshit Goyal* and Griffin Chure*. This work highlights the limitati...
doi.org
April 25, 2025 at 6:10 PM
Happy to have this out there! I had a lot of fun working with (and learning from) @akshitg.bsky.social on this mini-review on microdiversity in microbial populations and how current ecological theory fails to quantitatively explain the observations. doi.org/10.1111/1462...
Reposted by Griffin Chure
Excited to finally share this work w/ @suryaganguli.bsky.social Tl;dr: we find the first closed-form analytical theory that replicates the outputs of the very simplest diffusion models, with median pixel wise r^2 values of 90%+. arxiv.org/abs/2412.20292
December 31, 2024 at 4:00 PM
Excited to finally share this work w/ @suryaganguli.bsky.social Tl;dr: we find the first closed-form analytical theory that replicates the outputs of the very simplest diffusion models, with median pixel wise r^2 values of 90%+. arxiv.org/abs/2412.20292
Reposted by Griffin Chure
Generate random draws from a Cauchy just to remind yourself that you almost never actually want a Cauchy anywhere in a probabilistic model.
generate random draws from a cauchy just to feel something
November 13, 2024 at 2:25 PM
Generate random draws from a Cauchy just to remind yourself that you almost never actually want a Cauchy anywhere in a probabilistic model.
Happy to have this out today in JOSS! Hplc-py is a Python software tool that quantitatively decomposes complex chromatograms into their constituent signals: joss.theoj.org/papers/10.21...
hplc-py: A Python Utility For Rapid Quantification of Complex Chemical Chromatograms
Chure et al., (2024). hplc-py: A Python Utility For Rapid Quantification of Complex Chemical Chromatograms. Journal of Open Source Software, 9(94), 6270, https://doi.org/10.21105/joss.06270
joss.theoj.org
February 16, 2024 at 9:18 PM
Happy to have this out today in JOSS! Hplc-py is a Python software tool that quantitatively decomposes complex chromatograms into their constituent signals: joss.theoj.org/papers/10.21...
Reposted by Griffin Chure
I am cautiously optimistic that my lab will have an open postdoc position in 2024. If you are potentially interested, please reach out. Or if you know somebody who might be interested, please connect us. My email is on our lab website sklab.science
SKLAB Home
sklab.science
October 17, 2023 at 1:12 AM
I am cautiously optimistic that my lab will have an open postdoc position in 2024. If you are potentially interested, please reach out. Or if you know somebody who might be interested, please connect us. My email is on our lab website sklab.science
Over the past two years, I've used HPLC to measure carbon turnover in microbes. The most painful part was quantifying the resulting chromatograms. Today, I (with Jonas Cremer) released hplc-py: A python tool that makes quantification easy. cremerlab.github.io/hplc-py
October 10, 2023 at 4:49 PM
Over the past two years, I've used HPLC to measure carbon turnover in microbes. The most painful part was quantifying the resulting chromatograms. Today, I (with Jonas Cremer) released hplc-py: A python tool that makes quantification easy. cremerlab.github.io/hplc-py
Reposted by Griffin Chure
If you’re interested in comprehensive guidance for improving your communication skills I cannot recommend the book “Trees, Maps, and Theorems” enough, www.principiae.be/X0100.php. 2/5
www.principiae.be
August 30, 2023 at 6:20 PM
If you’re interested in comprehensive guidance for improving your communication skills I cannot recommend the book “Trees, Maps, and Theorems” enough, www.principiae.be/X0100.php. 2/5