Galaxy Project
@galaxyproject.bsky.social
The Galaxy Project powers global life sciences analytics by turning the world’s most advanced cyberinfrastructure into a free, browser-based analysis platform for everyone. https://galaxyproject.org/
European Galaxy Days 2025 might be over, but the talks aren’t. Explore our new playlist featuring highlights from EGD2025
YouTube Playlist: https://youtube.com/playlist?list=PLNFLKDpdM3B9YxK0suz3VN-dSaKmWAhk-&si=tLCu61CpkgGiplaw
News Item: (1/2)
YouTube Playlist: https://youtube.com/playlist?list=PLNFLKDpdM3B9YxK0suz3VN-dSaKmWAhk-&si=tLCu61CpkgGiplaw
News Item: (1/2)
EGD2025
Event: European Galaxy Days 2025 (https://galaxyproject.org/news/2025-10-15-egd2025/)
youtube.com
November 10, 2025 at 3:39 PM
European Galaxy Days 2025 might be over, but the talks aren’t. Explore our new playlist featuring highlights from EGD2025
YouTube Playlist: https://youtube.com/playlist?list=PLNFLKDpdM3B9YxK0suz3VN-dSaKmWAhk-&si=tLCu61CpkgGiplaw
News Item: (1/2)
YouTube Playlist: https://youtube.com/playlist?list=PLNFLKDpdM3B9YxK0suz3VN-dSaKmWAhk-&si=tLCu61CpkgGiplaw
News Item: (1/2)
If you're at Genome Informatics ##GI2025 this week, be sure to stop by the 3 Galaxy posters to chat with Delphine, Mike and Anton about great new things in Galaxy. (1/5)
November 6, 2025 at 9:59 PM
If you're at Genome Informatics ##GI2025 this week, be sure to stop by the 3 Galaxy posters to chat with Delphine, Mike and Anton about great new things in Galaxy. (1/5)
Reposted by Galaxy Project
Congrats to all three recipients! To learn more about the James P. Taylor Foundation for Open Science and this scholarship, go to jxtxfoundation.org/news/2025-01.... Enjoy the conference! [8/8]
JXTX Foundation Awards Scholarships for CSHL Genome Informatics 2025
JXTX: The James P. Taylor Foundation for Open Science is pleased to announce the 2025 CSHL Genome Informatics scholarship recipients.
jxtxfoundation.org
November 6, 2025 at 3:37 PM
Congrats to all three recipients! To learn more about the James P. Taylor Foundation for Open Science and this scholarship, go to jxtxfoundation.org/news/2025-01.... Enjoy the conference! [8/8]
Reposted by Galaxy Project
His current project integrates RNA-seq data across species to identify conserved and differential gene programs—revealing fundamental principles of gene regulation and evolution. Ryan enjoys playing soccer, hockey, and piano. ⚽🏒🎹 [7/8]
November 6, 2025 at 3:32 PM
His current project integrates RNA-seq data across species to identify conserved and differential gene programs—revealing fundamental principles of gene regulation and evolution. Ryan enjoys playing soccer, hockey, and piano. ⚽🏒🎹 [7/8]
Reposted by Galaxy Project
Congrats to Ryan Moreno for winning a JXTX scholarship to Genome Informatics! Ryan is a PhD student in Biomed Data Science at UW-Madison, advised by Dr Sushmita Roy. He leverages evolutionary info to enhance computational analyses of gene regulation and expression. [6/8]
November 6, 2025 at 3:32 PM
Congrats to Ryan Moreno for winning a JXTX scholarship to Genome Informatics! Ryan is a PhD student in Biomed Data Science at UW-Madison, advised by Dr Sushmita Roy. He leverages evolutionary info to enhance computational analyses of gene regulation and expression. [6/8]
Reposted by Galaxy Project
These core areas are essential for extracting meaningful insights from sequencing data. She's also worked analyzing ancient DNA. For fun, Megan enjoys reading, playing bridge and performing on piano and oboe. 🎹🎶 [5/8]
November 6, 2025 at 3:31 PM
These core areas are essential for extracting meaningful insights from sequencing data. She's also worked analyzing ancient DNA. For fun, Megan enjoys reading, playing bridge and performing on piano and oboe. 🎹🎶 [5/8]
Reposted by Galaxy Project
Congrats to Megan Le for winning a JXTX scholarship to Genome Informatics! Megan is a PhD student in Computer Science at MIT, advised by Drs. Heng Li and Bonnie Berger. She develops algorithms for genome analysis, tackling problems in genome assembly, variant calling, and read alignment. [4/8]
November 6, 2025 at 3:30 PM
Congrats to Megan Le for winning a JXTX scholarship to Genome Informatics! Megan is a PhD student in Computer Science at MIT, advised by Drs. Heng Li and Bonnie Berger. She develops algorithms for genome analysis, tackling problems in genome assembly, variant calling, and read alignment. [4/8]
Reposted by Galaxy Project
Her work tackles challenges in understanding gene expression at the transcript level, with major implications for precision medicine. When not in the lab, you'll find Zoe rock climbing, reading, or hanging out with her cat. 🧬🐱
November 6, 2025 at 3:29 PM
Her work tackles challenges in understanding gene expression at the transcript level, with major implications for precision medicine. When not in the lab, you'll find Zoe rock climbing, reading, or hanging out with her cat. 🧬🐱
Reposted by Galaxy Project
Congrats to Zoe Rudnick for winning a JXTX scholarship to Genome Informatics! Zoe is a 2nd-year PhD student in Biomedical Engineering at Johns Hopkins, developing algorithms to analyze RNA-seq data—incl long-read and single-cell datasets—to improve isoform quantification.
November 6, 2025 at 3:29 PM
Congrats to Zoe Rudnick for winning a JXTX scholarship to Genome Informatics! Zoe is a 2nd-year PhD student in Biomedical Engineering at Johns Hopkins, developing algorithms to analyze RNA-seq data—incl long-read and single-cell datasets—to improve isoform quantification.
Reposted by Galaxy Project
The James P. Taylor Foundation for Open Science is pleased to announce the recipients of the 2025 JXTX+CSHL Genome Informatics Scholarships. JXTX provides support for students to attend conferences in CompBio and data science, where they can present their work [1/8]
November 6, 2025 at 3:27 PM
The James P. Taylor Foundation for Open Science is pleased to announce the recipients of the 2025 JXTX+CSHL Genome Informatics Scholarships. JXTX provides support for students to attend conferences in CompBio and data science, where they can present their work [1/8]
🧠 Your Galaxy history too complex?
Name tags make it easy to track dataset origins and relationships across analyses—no endless renaming needed https://galaxyproject.org/news/2025-11-4-tags/
##GalaxyProject ##Bioinformatics ##Reproducibility
Name tags make it easy to track dataset origins and relationships across analyses—no endless renaming needed https://galaxyproject.org/news/2025-11-4-tags/
##GalaxyProject ##Bioinformatics ##Reproducibility
November 5, 2025 at 12:09 AM
🧠 Your Galaxy history too complex?
Name tags make it easy to track dataset origins and relationships across analyses—no endless renaming needed https://galaxyproject.org/news/2025-11-4-tags/
##GalaxyProject ##Bioinformatics ##Reproducibility
Name tags make it easy to track dataset origins and relationships across analyses—no endless renaming needed https://galaxyproject.org/news/2025-11-4-tags/
##GalaxyProject ##Bioinformatics ##Reproducibility
🌿 Ready to hack biodiversity with Galaxy?
Join the GTN Ecology Training & Collaboration Fest — three days of hands-on learning, data exploration, and open-science fun!
📅 Nov 25–27 | Hybrid (Concarneau 🇫🇷 + online)
📝 Register for free by Nov 20
training.galaxyproject.org/training-mat...
Join the GTN Ecology Training & Collaboration Fest — three days of hands-on learning, data exploration, and open-science fun!
📅 Nov 25–27 | Hybrid (Concarneau 🇫🇷 + online)
📝 Register for free by Nov 20
training.galaxyproject.org/training-mat...
Galaxy Ecology training and collabroation fest
As colleagues from CCAMLR / Antarctica conservation from Belgium are coming to Concarneau marine station to work on Galaxy Ecology use in their projects, we propose to create an open event, where coll...
training.galaxyproject.org
November 4, 2025 at 4:30 PM
🌿 Ready to hack biodiversity with Galaxy?
Join the GTN Ecology Training & Collaboration Fest — three days of hands-on learning, data exploration, and open-science fun!
📅 Nov 25–27 | Hybrid (Concarneau 🇫🇷 + online)
📝 Register for free by Nov 20
training.galaxyproject.org/training-mat...
Join the GTN Ecology Training & Collaboration Fest — three days of hands-on learning, data exploration, and open-science fun!
📅 Nov 25–27 | Hybrid (Concarneau 🇫🇷 + online)
📝 Register for free by Nov 20
training.galaxyproject.org/training-mat...
🐛 Galaxy not working? Don't suffer in silence — report it! Use the built-in reporting feature when something goes wrong. Read more here: https://galaxyproject.org/news/2025-10-30-squish-the-bug/ Let's make Galaxy better together!
October 31, 2025 at 3:04 PM
🐛 Galaxy not working? Don't suffer in silence — report it! Use the built-in reporting feature when something goes wrong. Read more here: https://galaxyproject.org/news/2025-10-30-squish-the-bug/ Let's make Galaxy better together!
Workflows by day, French wine and cheese by night 🍷🧀
Get ready to join us in Clermont-Ferrand, France for #GCC2026, June 22–26 2026! Learn, collaborate, and celebrate open science in the heart of Auvergne.
galaxyproject.org/news/2025-10...
Get ready to join us in Clermont-Ferrand, France for #GCC2026, June 22–26 2026! Learn, collaborate, and celebrate open science in the heart of Auvergne.
galaxyproject.org/news/2025-10...
GCC2026: The Galaxy Community is Heading to Clermont-Ferrand, France
Join us in June 2026 in the volcanic heart of Clermont-Ferrand for a week of collaboration, discovery, and open science.
galaxyproject.org
October 30, 2025 at 3:31 PM
Workflows by day, French wine and cheese by night 🍷🧀
Get ready to join us in Clermont-Ferrand, France for #GCC2026, June 22–26 2026! Learn, collaborate, and celebrate open science in the heart of Auvergne.
galaxyproject.org/news/2025-10...
Get ready to join us in Clermont-Ferrand, France for #GCC2026, June 22–26 2026! Learn, collaborate, and celebrate open science in the heart of Auvergne.
galaxyproject.org/news/2025-10...
RSpace joins the Galaxy
https://galaxyproject.org/news/2025-06-23-rspace-integration/
@researchspace.com
##UseGalaxy ##GalaxyProject ##EOSC ##ELN ##RDM ##RSpace
https://galaxyproject.org/news/2025-06-23-rspace-integration/
@researchspace.com
##UseGalaxy ##GalaxyProject ##EOSC ##ELN ##RDM ##RSpace
October 30, 2025 at 1:21 PM
RSpace joins the Galaxy
https://galaxyproject.org/news/2025-06-23-rspace-integration/
@researchspace.com
##UseGalaxy ##GalaxyProject ##EOSC ##ELN ##RDM ##RSpace
https://galaxyproject.org/news/2025-06-23-rspace-integration/
@researchspace.com
##UseGalaxy ##GalaxyProject ##EOSC ##ELN ##RDM ##RSpace
There is a little known Galaxy feature called "window manager". See how to use it ... https://galaxyproject.org/news/2025-10-28-window-manager/
October 28, 2025 at 4:42 PM
There is a little known Galaxy feature called "window manager". See how to use it ... https://galaxyproject.org/news/2025-10-28-window-manager/
🌿 Will you be at #PAG33?
Galaxy will be in San Diego for the International Plant & Animal Genome Conference (Jan 9–14, 2026), and we’d love to know who from the Galaxy Community will be there!
Let us know 👉 forms.gle/26PRwMH46aho...
Galaxy will be in San Diego for the International Plant & Animal Genome Conference (Jan 9–14, 2026), and we’d love to know who from the Galaxy Community will be there!
Let us know 👉 forms.gle/26PRwMH46aho...
Galaxy Community at PAG33
Let us know you’ll be at PAG33!
The Galaxy Project will be at the International Plant and Animal Genome Conference (PAG33) in San Diego, California, from January 9–14, 2026, and we’d love to know who ...
forms.gle
October 27, 2025 at 3:54 PM
🌿 Will you be at #PAG33?
Galaxy will be in San Diego for the International Plant & Animal Genome Conference (Jan 9–14, 2026), and we’d love to know who from the Galaxy Community will be there!
Let us know 👉 forms.gle/26PRwMH46aho...
Galaxy will be in San Diego for the International Plant & Animal Genome Conference (Jan 9–14, 2026), and we’d love to know who from the Galaxy Community will be there!
Let us know 👉 forms.gle/26PRwMH46aho...
Know How Sciensano harnesses Galaxy for Advanced Microbial Genomics, Precision Typing, and Rapid Outbreak Detection
http://galaxyproject.org/news/2025-04-25-galaxy-at-sciensano/
##UseGalaxy ##GalaxyProject ##EOSC ##EuroScienceGateway
http://galaxyproject.org/news/2025-04-25-galaxy-at-sciensano/
##UseGalaxy ##GalaxyProject ##EOSC ##EuroScienceGateway
Galaxy @ Sciensano: a comprehensive bioinformatics portal for genomics
Know How Sciensano harnesses Galaxy for Advanced Microbial Genomics, Precision Typing, and Rapid Outbreak Detection
galaxyproject.org
October 24, 2025 at 6:24 AM
Know How Sciensano harnesses Galaxy for Advanced Microbial Genomics, Precision Typing, and Rapid Outbreak Detection
http://galaxyproject.org/news/2025-04-25-galaxy-at-sciensano/
##UseGalaxy ##GalaxyProject ##EOSC ##EuroScienceGateway
http://galaxyproject.org/news/2025-04-25-galaxy-at-sciensano/
##UseGalaxy ##GalaxyProject ##EOSC ##EuroScienceGateway
Use parallel-download to get data from NCBI SRA. See how here -> https://galaxyproject.org/news/2025-10-23-sra-download/
October 23, 2025 at 9:09 PM
Use parallel-download to get data from NCBI SRA. See how here -> https://galaxyproject.org/news/2025-10-23-sra-download/
Specification for RO-Crate 1.2 released
https://galaxyproject.org/news/2025-06-04-ro-crate-1-2-release/
##UseGalaxy ##GalaxyProject ##EOSC ##EuroScienceGateway ##rocrate ##fair ##research_data ##research ##data
https://galaxyproject.org/news/2025-06-04-ro-crate-1-2-release/
##UseGalaxy ##GalaxyProject ##EOSC ##EuroScienceGateway ##rocrate ##fair ##research_data ##research ##data
October 23, 2025 at 2:04 PM
Specification for RO-Crate 1.2 released
https://galaxyproject.org/news/2025-06-04-ro-crate-1-2-release/
##UseGalaxy ##GalaxyProject ##EOSC ##EuroScienceGateway ##rocrate ##fair ##research_data ##research ##data
https://galaxyproject.org/news/2025-06-04-ro-crate-1-2-release/
##UseGalaxy ##GalaxyProject ##EOSC ##EuroScienceGateway ##rocrate ##fair ##research_data ##research ##data
📝 New blog post Released!
https://galaxyproject.org/news/2025-02-13-cellxgene-vip/
CELLxGENE-VIP (Visualization In Plugin) is an extension of the original CELLxGENE: https://github.com/chanzuckerberg/cellxgene tool developed by the Chan Zuckerberg Initiative.
It can efficiently extract deep (1/4)
https://galaxyproject.org/news/2025-02-13-cellxgene-vip/
CELLxGENE-VIP (Visualization In Plugin) is an extension of the original CELLxGENE: https://github.com/chanzuckerberg/cellxgene tool developed by the Chan Zuckerberg Initiative.
It can efficiently extract deep (1/4)
GitHub - chanzuckerberg/cellxgene: An interactive explorer for single-cell transcriptomics data
An interactive explorer for single-cell transcriptomics data - chanzuckerberg/cellxgene
github.com
October 22, 2025 at 3:32 PM
📝 New blog post Released!
https://galaxyproject.org/news/2025-02-13-cellxgene-vip/
CELLxGENE-VIP (Visualization In Plugin) is an extension of the original CELLxGENE: https://github.com/chanzuckerberg/cellxgene tool developed by the Chan Zuckerberg Initiative.
It can efficiently extract deep (1/4)
https://galaxyproject.org/news/2025-02-13-cellxgene-vip/
CELLxGENE-VIP (Visualization In Plugin) is an extension of the original CELLxGENE: https://github.com/chanzuckerberg/cellxgene tool developed by the Chan Zuckerberg Initiative.
It can efficiently extract deep (1/4)
Galactic views on the Conference on Research Data Infrastructure (CoRDI):
https://galaxyproject.org/news/2025-08-29-cordi/
##UseGalaxy ##GalaxyProject ##NFDI ##UniFreiburg ##RDM
https://galaxyproject.org/news/2025-08-29-cordi/
##UseGalaxy ##GalaxyProject ##NFDI ##UniFreiburg ##RDM
October 22, 2025 at 12:29 PM
Galactic views on the Conference on Research Data Infrastructure (CoRDI):
https://galaxyproject.org/news/2025-08-29-cordi/
##UseGalaxy ##GalaxyProject ##NFDI ##UniFreiburg ##RDM
https://galaxyproject.org/news/2025-08-29-cordi/
##UseGalaxy ##GalaxyProject ##NFDI ##UniFreiburg ##RDM
Discover one of Galaxy’s true superpowers — dataset collections! 🌟
Check out the blog (https://galaxyproject.org/news/2025-10-21-whycollections/) and video (https://youtu.be/yehY9tR_NX8?si=YH9CZ5KGWm2yVyPA) to see how they can simplify your workflows.
You might just find yourself wondering, (1/2)
Check out the blog (https://galaxyproject.org/news/2025-10-21-whycollections/) and video (https://youtu.be/yehY9tR_NX8?si=YH9CZ5KGWm2yVyPA) to see how they can simplify your workflows.
You might just find yourself wondering, (1/2)
October 21, 2025 at 8:26 PM
Discover one of Galaxy’s true superpowers — dataset collections! 🌟
Check out the blog (https://galaxyproject.org/news/2025-10-21-whycollections/) and video (https://youtu.be/yehY9tR_NX8?si=YH9CZ5KGWm2yVyPA) to see how they can simplify your workflows.
You might just find yourself wondering, (1/2)
Check out the blog (https://galaxyproject.org/news/2025-10-21-whycollections/) and video (https://youtu.be/yehY9tR_NX8?si=YH9CZ5KGWm2yVyPA) to see how they can simplify your workflows.
You might just find yourself wondering, (1/2)
My internship experience with assembling genomes and annotating them during a 6 week internship at Freiburg Galaxy.
https://galaxyproject.org/news/2025-07-22-ming-li-internship/
##UseGalaxy ##GalaxyProject ##EOSC ##Bioinformatics ##Genomics ##GenomeAssembly ##GenomeAnnotation ##TrainingProgram (1/2)
https://galaxyproject.org/news/2025-07-22-ming-li-internship/
##UseGalaxy ##GalaxyProject ##EOSC ##Bioinformatics ##Genomics ##GenomeAssembly ##GenomeAnnotation ##TrainingProgram (1/2)
Exploring Genomics with Galaxy: A Six-Week Internship Journey
My internship experience with assembling genomes and annotating them during a 6 week internship
galaxyproject.org
October 21, 2025 at 7:57 AM
My internship experience with assembling genomes and annotating them during a 6 week internship at Freiburg Galaxy.
https://galaxyproject.org/news/2025-07-22-ming-li-internship/
##UseGalaxy ##GalaxyProject ##EOSC ##Bioinformatics ##Genomics ##GenomeAssembly ##GenomeAnnotation ##TrainingProgram (1/2)
https://galaxyproject.org/news/2025-07-22-ming-li-internship/
##UseGalaxy ##GalaxyProject ##EOSC ##Bioinformatics ##Genomics ##GenomeAssembly ##GenomeAnnotation ##TrainingProgram (1/2)
How do you train the next generation of open-science explorers? With Galaxy, collaboration, and a bit of computational magic.
https://training.galaxyproject.org/training-material/news/2025/07/17/gta-overview.html
##UseGalaxy ##GalaxyProject ##EOSC ##GalaxyTraining ##OpenScience ##Bioinformatics (1/2)
https://training.galaxyproject.org/training-material/news/2025/07/17/gta-overview.html
##UseGalaxy ##GalaxyProject ##EOSC ##GalaxyTraining ##OpenScience ##Bioinformatics (1/2)
Galaxy Training Academy 2025: round two of our GTN education party!
The Galaxy Training Academy 2025 trained researchers in Galaxy data analysis world wide across a variety of scientific topics.
training.galaxyproject.org
October 20, 2025 at 3:04 PM
How do you train the next generation of open-science explorers? With Galaxy, collaboration, and a bit of computational magic.
https://training.galaxyproject.org/training-material/news/2025/07/17/gta-overview.html
##UseGalaxy ##GalaxyProject ##EOSC ##GalaxyTraining ##OpenScience ##Bioinformatics (1/2)
https://training.galaxyproject.org/training-material/news/2025/07/17/gta-overview.html
##UseGalaxy ##GalaxyProject ##EOSC ##GalaxyTraining ##OpenScience ##Bioinformatics (1/2)