Evomics Lab
@evomicslab.bsky.social
Exploring Omics in the Light of Evolution
PI: @iAmphioxus.bsky.social
Web: www.evomicslab.org
PI: @iAmphioxus.bsky.social
Web: www.evomicslab.org
Pinned
Evomics Lab
@evomicslab.bsky.social
· Apr 28
Evomics Lab – Exploring Omics in the Light of Evolution
evomicslab.org
📢 3 Postdoc positions available in @evomicslab.bsky.social
targeting on genome instability evolution of both yeast and human genomes. Both computational genomics and experimental genomics backgrounds are welcome! 🧬🧑💻🧪 For more information, see evomicslab.org or send me a message!
targeting on genome instability evolution of both yeast and human genomes. Both computational genomics and experimental genomics backgrounds are welcome! 🧬🧑💻🧪 For more information, see evomicslab.org or send me a message!
First #SMBE meeting for our lab！Definitely a memorable experience. Already looking forward to the next one! @official-smbe.bsky.social #SMBE2025
July 25, 2025 at 3:47 PM
First #SMBE meeting for our lab！Definitely a memorable experience. Already looking forward to the next one! @official-smbe.bsky.social #SMBE2025
📣 Glad to share our genome paper on an early-diverged cephalochordate (amphioxus) species, Asymmetron lucayanum! By decoding & analyzing this genome in a comparative genomics framework, we know better now regarding the genome and gene evolution in cephalochordates.
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
The genome of the early diverged amphioxus, Asymmetron lucayanum, illuminates the evolution of genome architecture and gene repertoires in cephalochordates
Cephalochordates (amphioxus or lancelet) are considered as living proxies for ancestral chordates due to their key phylogenetic position and slow evolutionary rate. The genomes of living amphioxus thu...
www.biorxiv.org
July 22, 2025 at 11:23 PM
📣 Glad to share our genome paper on an early-diverged cephalochordate (amphioxus) species, Asymmetron lucayanum! By decoding & analyzing this genome in a comparative genomics framework, we know better now regarding the genome and gene evolution in cephalochordates.
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
Reposted by Evomics Lab
📣Our #SMBE 2025 Symposium (No. 3) on Experimental Evolution will be held today (7.22, Tuesday) at 10:30 in Room 4, Building No. 8. An associated poster session will be held at 14:00 (poster number: S3-P01~P16). Welcome to join! let's study evolution in action! 🥳 🎉 @official-smbe.bsky.social
July 21, 2025 at 11:21 PM
📣Our #SMBE 2025 Symposium (No. 3) on Experimental Evolution will be held today (7.22, Tuesday) at 10:30 in Room 4, Building No. 8. An associated poster session will be held at 14:00 (poster number: S3-P01~P16). Welcome to join! let's study evolution in action! 🥳 🎉 @official-smbe.bsky.social
Reposted by Evomics Lab
Welcome to attend our SMBE2025 Symposium on Experimental Evolution. Co-organized by Dao-Qiong Zheng, @jingli-0512.bsky.social and myself.
#SMBE2025 Symposium 3: Experimental evolution: studying evolution in action
🔗 smbe2025.scimeeting.cn/en/web/program/25070
🔗 smbe2025.scimeeting.cn/en/web/program/25070
June 17, 2025 at 1:45 AM
Welcome to attend our SMBE2025 Symposium on Experimental Evolution. Co-organized by Dao-Qiong Zheng, @jingli-0512.bsky.social and myself.
📢 3 Postdoc positions available in @evomicslab.bsky.social
targeting on genome instability evolution of both yeast and human genomes. Both computational genomics and experimental genomics backgrounds are welcome! 🧬🧑💻🧪 For more information, see evomicslab.org or send me a message!
targeting on genome instability evolution of both yeast and human genomes. Both computational genomics and experimental genomics backgrounds are welcome! 🧬🧑💻🧪 For more information, see evomicslab.org or send me a message!
Evomics Lab – Exploring Omics in the Light of Evolution
evomicslab.org
April 28, 2025 at 6:17 AM
📢 3 Postdoc positions available in @evomicslab.bsky.social
targeting on genome instability evolution of both yeast and human genomes. Both computational genomics and experimental genomics backgrounds are welcome! 🧬🧑💻🧪 For more information, see evomicslab.org or send me a message!
targeting on genome instability evolution of both yeast and human genomes. Both computational genomics and experimental genomics backgrounds are welcome! 🧬🧑💻🧪 For more information, see evomicslab.org or send me a message!
Glad to see the copy-edited version of our VRPG paper formally published in the latest issue of @genomeresearch.bsky.social ! We developed VRPG as a novel visualization framework for intuitively exploring pangenome graphs in a linear-reference-projected context.
genome.cshlp.org/content/35/2...
genome.cshlp.org/content/35/2...
Interactive visualization and interpretation of pangenome graphs by linear reference–based coordinate projection and annotation integration
An international, peer-reviewed genome sciences journal featuring outstanding original research that offers novel insights into the biology of all organisms
genome.cshlp.org
February 15, 2025 at 7:08 AM
Glad to see the copy-edited version of our VRPG paper formally published in the latest issue of @genomeresearch.bsky.social ! We developed VRPG as a novel visualization framework for intuitively exploring pangenome graphs in a linear-reference-projected context.
genome.cshlp.org/content/35/2...
genome.cshlp.org/content/35/2...
Reposted by Evomics Lab
📢📢📢 The FINAL COUNT DOWN for the extended abstract submission deadline of #SMBE2025! Please submit your abstract by 23:59 (GMT +8) of February 15, 2025 [Saturday]! And shout out again for our symposium on Experimental Evolution ! 🎉🎉🎉 @OfficialSMBE
#LTEE #ExperimentalEvolution
#LTEE #ExperimentalEvolution
📢📢📢 #SMBE2025 Abstract Submission EXTENDED to Saturday, February 15, 2025
We also invite you to register at www.smbe2025.org
@SMBEmeetings
We also invite you to register at www.smbe2025.org
@SMBEmeetings
February 12, 2025 at 12:58 PM
📢📢📢 The FINAL COUNT DOWN for the extended abstract submission deadline of #SMBE2025! Please submit your abstract by 23:59 (GMT +8) of February 15, 2025 [Saturday]! And shout out again for our symposium on Experimental Evolution ! 🎉🎉🎉 @OfficialSMBE
#LTEE #ExperimentalEvolution
#LTEE #ExperimentalEvolution
📢🧬Proud to announce our 1st work on pangenome graphs is early online @genomeresearch.bsky.social ! Here we developed an interpretative visualization framework for pangenome graphs named VRPG, which seamlessly bridges the graph and linear genomics world.
genome.cshlp.org/content/earl...
genome.cshlp.org/content/earl...
Interactive visualization and interpretation of pangenome graphs by linear-reference-based coordinate projection and annotation
integration
An international, peer-reviewed genome sciences journal featuring outstanding original research that offers novel insights into the biology of all organisms
genome.cshlp.org
January 14, 2025 at 5:55 AM
📢🧬Proud to announce our 1st work on pangenome graphs is early online @genomeresearch.bsky.social ! Here we developed an interpretative visualization framework for pangenome graphs named VRPG, which seamlessly bridges the graph and linear genomics world.
genome.cshlp.org/content/earl...
genome.cshlp.org/content/earl...
Reposted by Evomics Lab
📢 2nd-round abstract submission call for the 2025 @OfficialSMBE
annual meeting in #Beijing .
Where: smbe2025.scimeeting.cn/en/web/index...
When: now - 2025/01/30. Welcome for all abstract submissions, especially for our Experimental Evolution Symposium !!!
annual meeting in #Beijing .
Where: smbe2025.scimeeting.cn/en/web/index...
When: now - 2025/01/30. Welcome for all abstract submissions, especially for our Experimental Evolution Symposium !!!
January 10, 2025 at 2:47 PM
📢 2nd-round abstract submission call for the 2025 @OfficialSMBE
annual meeting in #Beijing .
Where: smbe2025.scimeeting.cn/en/web/index...
When: now - 2025/01/30. Welcome for all abstract submissions, especially for our Experimental Evolution Symposium !!!
annual meeting in #Beijing .
Where: smbe2025.scimeeting.cn/en/web/index...
When: now - 2025/01/30. Welcome for all abstract submissions, especially for our Experimental Evolution Symposium !!!
Reposted by Evomics Lab
📣 ⚠️👀Attn: The abstract submission for the #SMBE2025 meeting in Beijing @official-smbe.bsky.social
is open now!
Submission site: smbe2025.scimeeting.cn/en/web/index...
Submission Deadline: 2025.01.30
Welcome for all abstract submissions, especially for our Experimental Evolution Symposium !!!
is open now!
Submission site: smbe2025.scimeeting.cn/en/web/index...
Submission Deadline: 2025.01.30
Welcome for all abstract submissions, especially for our Experimental Evolution Symposium !!!
December 20, 2024 at 6:31 AM
📣 ⚠️👀Attn: The abstract submission for the #SMBE2025 meeting in Beijing @official-smbe.bsky.social
is open now!
Submission site: smbe2025.scimeeting.cn/en/web/index...
Submission Deadline: 2025.01.30
Welcome for all abstract submissions, especially for our Experimental Evolution Symposium !!!
is open now!
Submission site: smbe2025.scimeeting.cn/en/web/index...
Submission Deadline: 2025.01.30
Welcome for all abstract submissions, especially for our Experimental Evolution Symposium !!!
Welcome to join our dedicated symposium on Experimental Evolution for the @MolBioEvol 2025 Beijing Meeting! See you in Beijing!
Glad to announce that our (with Dao-Qiong Zheng & Jing Li) proposed symposium on #ExperimentalEvolution has been selected for the @official-smbe.bsky.social 2025 conference in #Beijing! @petrovadmitri.bsky.social will be our invited speaker! Please save the date and consider joining our symposium!
December 13, 2024 at 7:53 AM
Welcome to join our dedicated symposium on Experimental Evolution for the @MolBioEvol 2025 Beijing Meeting! See you in Beijing!
The copy-edited version of our NanoTrans paper has been recently published @JGenetGenomics ! Here we developed an all-in-one pipeline for comprehensive data analysis for @nanoporetech.com direct-RNA sequencing (#DRS). www.sciencedirect.com/science/arti...
NanoTrans: an integrated computational framework for comprehensive transcriptome analysis with nanopore direct RNA sequencing
Nanopore direct RNA sequencing (DRS) provides the direct access to native RNA strands with full-length information, shedding light on rich qualitative…
www.sciencedirect.com
December 10, 2024 at 3:18 AM
The copy-edited version of our NanoTrans paper has been recently published @JGenetGenomics ! Here we developed an all-in-one pipeline for comprehensive data analysis for @nanoporetech.com direct-RNA sequencing (#DRS). www.sciencedirect.com/science/arti...
Excited to introduce the ScRAPdb work that we recently published at Nucleic Acids Research, in which we assembled a #pangenome x #multi-omics database for #yeast. This is one step forward for a pan-multi-omics understanding of genome & trait evolution. Read more > academic.oup.com/nar/advance-...
ScRAPdb: an integrated pan-omics database for the Saccharomyces cerevisiae reference assembly panel
Abstract. As a unicellular eukaryote, the budding yeast Saccharomyces cerevisiae strikes a unique balance between biological complexity and experimental tr
academic.oup.com
November 17, 2024 at 2:56 AM
Excited to introduce the ScRAPdb work that we recently published at Nucleic Acids Research, in which we assembled a #pangenome x #multi-omics database for #yeast. This is one step forward for a pan-multi-omics understanding of genome & trait evolution. Read more > academic.oup.com/nar/advance-...