Charley Yen, PhD
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eugeniecyen.bsky.social
Charley Yen, PhD
@eugeniecyen.bsky.social
Postdoc @QMUL @UMassAmherst applying genomics and epigenomics for sea turtle conservation 🌊🐢🧬 previously @CamZoology 🦋 she/her
Reposted by Charley Yen, PhD
1/9 New in @science.org www.science.org/doi/10.1126/science.ado8005
How does genetic architecture constrain evolutionary trajectories? To address this question, we inferred the genetic architecture of convergent plumage coloration and its evolutionary history in wheatears.
A mosaic of modular variation at a single gene underpins convergent plumage coloration
The reshuffling of genomic variation from multiple origins is an important contributor to phenotypic diversification, yet insights into the evolutionary trajectories of this combinatorial process and ...
www.science.org
October 17, 2025 at 5:50 AM
Reposted by Charley Yen, PhD
Join @pbrekke.bsky.social, @eugeniecyen.bsky.social and @atjcagan.bsky.social at our next Science and Conservation Event on 4th Nov as they discuss how genomics can offer new insights into assessing wildlife health.
🎟️ Book your free ticket: www.zsl.org/news-and-eve...
October 14, 2025 at 3:18 PM
Catch my talk tomorrow on all things nanopore and DNA methylation for sea turtle conservation! 🐢
Our next guest seminar is happening on Friday, October 10th at 3.30pm GMT in the QM Innovation Centre, Clark-Kennedy LT. This will be a joint seminar with Oxford Nanopore @nanoporetech.com
and QMUL. Please book your place here: nanoporetech.swoogo.com/QMUL_Epigene... or scan the QR code below.
October 9, 2025 at 1:22 PM
Reposted by Charley Yen, PhD
RIP #JaneGoodall - one of the modern pioneers of profound interconnections between people, animals and ecosystems. Her life was lived through science, compassion and tireless advocacy for the multiple values of nature - leaving a legacy that will endure for people and planet.
October 1, 2025 at 7:18 PM
Reposted by Charley Yen, PhD
The ruling paves the way for whole-genome sequencing to be admitted as evidence in US criminal trials

go.nature.com/4nQjENj
US serial killer case opens door to using cutting-edge DNA data in courts
New York trial could set a legal precedent by admitting findings from whole-genome sequencing as evidence.
go.nature.com
September 25, 2025 at 1:13 PM
Reposted by Charley Yen, PhD
If you want to know more about DNA methylation in conservation, especially temperature-sex dependent species, check this cool video & the paper tinyurl.com/yvspkzp6! It was a pleasure to be part of such cool collaboration, very well done for the intense work @eugeniecyen.bsky.social you're a queen!
Thanks @gigascience.bsky.social for the cool video opportunity, and thanks again to all co-authors! @alicebalard.bsky.social @chemamd.bsky.social @qmulsbbs.bsky.social et al
Watch this new explainer video from @eugeniecyen.bsky.social on her labs work on on conservation #genomics and #epigenomics of endangered Loggerhead Turtles youtu.be/3C4D43mEBBk?...
August 29, 2025 at 3:44 PM
Thanks @gigascience.bsky.social for the cool video opportunity, and thanks again to all co-authors! @alicebalard.bsky.social @chemamd.bsky.social @qmulsbbs.bsky.social et al
August 29, 2025 at 3:25 PM
Reposted by Charley Yen, PhD
📢We’re recruiting!

🌳Assistant Professor in Ecology, Evolution & Conservation

A permanent teaching-focused position in our vibrant, welcoming and intellectually stimulating academic community.

Deadline: 7 September.

Apply here: bit.ly/3HKtNeZ
August 20, 2025 at 10:36 AM
Reposted by Charley Yen, PhD
Did you know that fungi can have more sexes than you can imagine, slugs have both female and male reproductive organs, and many birds pair up into same-sex couples?

Our special guided tour on 25 September will explore nature's diversity and its interpretation by scientists.
Queer Ecology Evening at the Linnean Society
A special guided tour exploring the diversity of nature and its interpretation by scientists throughout history.
buff.ly
August 28, 2025 at 5:16 PM
Reposted by Charley Yen, PhD
Turtley cool usage of @nanoporetech.com sequencing to simultaneously generate genomic and epigenomic resources simultaneously.

Chromosome-level genome assembly and methylome profile yield insights for the conservation of endangered loggerhead sea turtles doi.org/10.1093/giga...
July 4, 2025 at 3:40 PM
Great to see this published in @gigascience.bsky.social! Using @nanoporetech.com, we generated genome and methylome resources simultaneously to drive molecular insights for conservation of loggerhead sea turtles in Cape Verde 🐢🧬🇨🇻
doi.org/10.1093/giga...
Chromosome-level genome assembly and methylome profile yield insights for the conservation of endangered loggerhead sea turtles
AbstractBackground. Characterizing genetic and epigenetic diversity is crucial for assessing the adaptive potential of threatened populations and species i
doi.org
June 10, 2025 at 2:55 PM
Reposted by Charley Yen, PhD
The genomes of all sea-turtle species are now online and ready for use! Find the haplotype-resolved assemblies from our preprint below on ENA
tinyurl.com/seaturtle-ge...

🐢

#genomes #turtles
March 31, 2025 at 2:17 PM
Reposted by Charley Yen, PhD
Eugenie 'Charley' Yen (Queen Mary U of London) then shared her beautiful work using Oxford Nanopore sequencing for genomic & epigenomic approaches for conservation of endangered loggerhead sea turtles - even taking the P2 device into the field to deploy methylation-based biomarkers in real-time!
January 15, 2025 at 8:38 PM
Reposted by Charley Yen, PhD
There were remarkable updates presented at #PAG32 on incredibly accurate @nanoporetech.com sequencing for applications ranging from telomere-to-telomere plant & animal genome assemblies, to amplicon sequencing at massive scale. Here are some highlights in case you missed them (thread)
January 15, 2025 at 8:38 PM
Reposted by Charley Yen, PhD
Exciting PhD opportunity, please apply by the 20/01 and feel free to email me with any questions! Fully funded by @scilifelab.se
❕ PhD position on 🦋 ❕

Passionate about studying the genomics of local adaptation? Join us for a fully funded 4-year PhD at Uppsala University, Sweden. Enjoy competitive salaries, full employment benefits, and a vibrant research community surrounded by nature. Apply here uu.varbi.com/en/what:job/...
January 14, 2025 at 8:35 AM
Excited to present at the #PAG2025 @nanoporetech.com workshop tomorrow! Come along to hear more about how we incorporate ONT methylation sequencing for sea turtle conservation! 🐢🧬
Who’s all going to #PAG2025? Be sure to make our @nanoporetech.com workshop, where you’ll hear how real-time, scalable, highly accurate sequencing is transforming:
🦋 Biodiversity research at scale
🐢 Endangered species conservation
🦠 Pathogen surveillance
🌱 T2T plant assemblies
bit.ly/3DqFncM
Oxford Nanopore at PAG 2025
Visit Oxford Nanopore Technologies at PAG 2025
bit.ly
January 14, 2025 at 12:01 AM
Reposted by Charley Yen, PhD
Co-occurring species have similar tolerances to rising temperatures, suggesting communities will decline abruptly due to climate change. I wrote about our latest paper for The Conversation - check it out! 🧪🌏🥵 theconversation.com/shared-heat-...
Shared heat tolerance leaves ecosystems at risk of sudden climate-driven collapse – new research
Different species often malfunction at the same temperature limit.
theconversation.com
January 9, 2025 at 3:33 PM