Lizzie Bolitho
@ebolitho.bsky.social
Reposted by Lizzie Bolitho
Importance of being open!🌍 One of the greatest strengths of @multiqc.info is open source development.🧵What started as a one-person project in 2015 has grown into a collaborative effort involving 235 contributors today.🧵
📚 Read the blog post: hubs.la/Q03WRgb20
📚 Read the blog post: hubs.la/Q03WRgb20
December 4, 2025 at 2:04 PM
Importance of being open!🌍 One of the greatest strengths of @multiqc.info is open source development.🧵What started as a one-person project in 2015 has grown into a collaborative effort involving 235 contributors today.🧵
📚 Read the blog post: hubs.la/Q03WRgb20
📚 Read the blog post: hubs.la/Q03WRgb20
Reposted by Lizzie Bolitho
"Using open source tools like Nextflow and @nf-co.re allows organizations to run best practice pipelines off the shelf, which are reproducible and can be executed on various infrastructures.”
Check out ELIXIR's report on how open source software drives innovation in life sciences research. ⬇️
Check out ELIXIR's report on how open source software drives innovation in life sciences research. ⬇️
Large, complex datasets 💾 are fundamental to the life sciences and form the backbone of innovation. 📣 ELIXIR has published a report on the contribution of #OpenSource #software and #workflows to innovation in the #lifesciences 🔬.
Read the news 👉 https://loom.ly/THB_IX4
Read the news 👉 https://loom.ly/THB_IX4
December 2, 2025 at 8:27 AM
"Using open source tools like Nextflow and @nf-co.re allows organizations to run best practice pipelines off the shelf, which are reproducible and can be executed on various infrastructures.”
Check out ELIXIR's report on how open source software drives innovation in life sciences research. ⬇️
Check out ELIXIR's report on how open source software drives innovation in life sciences research. ⬇️
Reposted by Lizzie Bolitho
💻 Discover all the latest features of Nextflow on Dec 11, , including the new Plugin Registry, workflow inputs & outputs, and static types.
Plus, don't miss the opportunity to ask the creator of Nextflow (@paoloditommaso.bsky.social) anything! 🌟
🌟 Register now: hubs.la/Q03W12B90
Plus, don't miss the opportunity to ask the creator of Nextflow (@paoloditommaso.bsky.social) anything! 🌟
🌟 Register now: hubs.la/Q03W12B90
November 27, 2025 at 8:40 AM
💻 Discover all the latest features of Nextflow on Dec 11, , including the new Plugin Registry, workflow inputs & outputs, and static types.
Plus, don't miss the opportunity to ask the creator of Nextflow (@paoloditommaso.bsky.social) anything! 🌟
🌟 Register now: hubs.la/Q03W12B90
Plus, don't miss the opportunity to ask the creator of Nextflow (@paoloditommaso.bsky.social) anything! 🌟
🌟 Register now: hubs.la/Q03W12B90
Super excited about this! 🧬
Visual workflow automation made simple!🎉 Introducing the #NodeRED integration for Seqera that lets researchers automate their bioinformatics workflows using a visual drag-and-drop interface - no coding or IT support required. 5,000+ integrations!🧵
November 25, 2025 at 3:31 PM
Super excited about this! 🧬
Reposted by Lizzie Bolitho
By modernizing legacy pipelines, optimizing CEs, and automating large-scale data analysis, Champions Oncology were able to cut turnaround time from days to hours while significantly reducing compute costs ⏩
November 25, 2025 at 11:45 AM
By modernizing legacy pipelines, optimizing CEs, and automating large-scale data analysis, Champions Oncology were able to cut turnaround time from days to hours while significantly reducing compute costs ⏩
Reposted by Lizzie Bolitho
Discover how @nextflow.io and Seqera are helping pharma, diagnostics, and biotech companies solve some of the biggest challenges in bioinformatics ⬇️
November 24, 2025 at 11:33 AM
Discover how @nextflow.io and Seqera are helping pharma, diagnostics, and biotech companies solve some of the biggest challenges in bioinformatics ⬇️
Reposted by Lizzie Bolitho
What an incredible few weeks of Seqera Sessions! 🌟Participants came together for @nextflow.io training, expert presentations & valuable networking.
Huge thank you to our speakers Cameron McPherson (Roche), Ernie Hobbs (Strand), and Jan Havranek (Eligo Bioscience), and to everyone who attended🙏
Huge thank you to our speakers Cameron McPherson (Roche), Ernie Hobbs (Strand), and Jan Havranek (Eligo Bioscience), and to everyone who attended🙏
November 20, 2025 at 2:46 PM
What an incredible few weeks of Seqera Sessions! 🌟Participants came together for @nextflow.io training, expert presentations & valuable networking.
Huge thank you to our speakers Cameron McPherson (Roche), Ernie Hobbs (Strand), and Jan Havranek (Eligo Bioscience), and to everyone who attended🙏
Huge thank you to our speakers Cameron McPherson (Roche), Ernie Hobbs (Strand), and Jan Havranek (Eligo Bioscience), and to everyone who attended🙏
Reposted by Lizzie Bolitho
Ready to take your involvement with the Nextflow community to the next level?⬆️ Apply to become a Nextflow Ambassador by Dec 20, 2025!🧵
📚 Learn more: hubs.la/Q03V9PSs0
🔗 Apply here: hubs.la/Q03V9PQQ0
#Bioinformatics #DataScience
📚 Learn more: hubs.la/Q03V9PSs0
🔗 Apply here: hubs.la/Q03V9PQQ0
#Bioinformatics #DataScience
November 20, 2025 at 9:03 AM
Ready to take your involvement with the Nextflow community to the next level?⬆️ Apply to become a Nextflow Ambassador by Dec 20, 2025!🧵
📚 Learn more: hubs.la/Q03V9PSs0
🔗 Apply here: hubs.la/Q03V9PQQ0
#Bioinformatics #DataScience
📚 Learn more: hubs.la/Q03V9PSs0
🔗 Apply here: hubs.la/Q03V9PQQ0
#Bioinformatics #DataScience
Reposted by Lizzie Bolitho
💡A simple idea emerged from the frustration of manually parsing countless bioinformatics tool outputs.📊 That idea became MultiQC, and today we're celebrating 10 years of transforming global bioinformatics🌎
📗Read the highlights blog by @seqera.io: hubs.la/Q03TXC_N0
📗Read the highlights blog by @seqera.io: hubs.la/Q03TXC_N0
November 19, 2025 at 9:20 AM
💡A simple idea emerged from the frustration of manually parsing countless bioinformatics tool outputs.📊 That idea became MultiQC, and today we're celebrating 10 years of transforming global bioinformatics🌎
📗Read the highlights blog by @seqera.io: hubs.la/Q03TXC_N0
📗Read the highlights blog by @seqera.io: hubs.la/Q03TXC_N0
Reposted by Lizzie Bolitho
BioSkryb Genomics are enabling researchers to get a complete multi-omic view of the cellular ecosystem via the high-precision analysis of individual cells.🧵
📈 Processing multi-omic data of thousands of cells is time-consuming, costly and biologically complex, which becomes unmanageable at scale.
📈 Processing multi-omic data of thousands of cells is time-consuming, costly and biologically complex, which becomes unmanageable at scale.
November 19, 2025 at 9:24 AM
BioSkryb Genomics are enabling researchers to get a complete multi-omic view of the cellular ecosystem via the high-precision analysis of individual cells.🧵
📈 Processing multi-omic data of thousands of cells is time-consuming, costly and biologically complex, which becomes unmanageable at scale.
📈 Processing multi-omic data of thousands of cells is time-consuming, costly and biologically complex, which becomes unmanageable at scale.
Reposted by Lizzie Bolitho
🚀Nextflow training in Paris is in full swing! Participants are learning how to build simple multi-step workflows and run them from the command line, guided by expert instructors from @seqera.io 💻
November 18, 2025 at 10:21 AM
🚀Nextflow training in Paris is in full swing! Participants are learning how to build simple multi-step workflows and run them from the command line, guided by expert instructors from @seqera.io 💻
Reposted by Lizzie Bolitho
After a fantastic morning of @nextflow.io training, the team are ready for an afternoon of #Seqera Sessions here in Durham, North Carolina! 🚀 Get ready for an afternoon of live demos and expert talks, including from Strand Life Sciences!
November 13, 2025 at 6:56 PM
After a fantastic morning of @nextflow.io training, the team are ready for an afternoon of #Seqera Sessions here in Durham, North Carolina! 🚀 Get ready for an afternoon of live demos and expert talks, including from Strand Life Sciences!
Reposted by Lizzie Bolitho
⏳ Last chance to register for Nextflow Training & Sessions in Paris next week! Join our beginner-friendly training to learn directly from the creators of @nextflow.io, followed by an afternoon of expert talks and live demos from industry leaders.🌟
🔗 Secure your place now: hubs.la/Q03Sy_Yk0
🔗 Secure your place now: hubs.la/Q03Sy_Yk0
November 11, 2025 at 10:32 AM
⏳ Last chance to register for Nextflow Training & Sessions in Paris next week! Join our beginner-friendly training to learn directly from the creators of @nextflow.io, followed by an afternoon of expert talks and live demos from industry leaders.🌟
🔗 Secure your place now: hubs.la/Q03Sy_Yk0
🔗 Secure your place now: hubs.la/Q03Sy_Yk0
Reposted by Lizzie Bolitho
🚀 Kickstart your #Nextflow journey on Nov 17-21 at Nextflow Training Week! Work through one of the courses on the #Nextflow training portal using a GitHub Codespaces training environment pre-loaded with all software, code & example data. Register here: hubs.la/Q03RZxl80
November 6, 2025 at 8:33 AM
🚀 Kickstart your #Nextflow journey on Nov 17-21 at Nextflow Training Week! Work through one of the courses on the #Nextflow training portal using a GitHub Codespaces training environment pre-loaded with all software, code & example data. Register here: hubs.la/Q03RZxl80
Reposted by Lizzie Bolitho
We're delighted to share our latest case study with Champions Oncology: Scaling multi-omics analysis to accelerate cancer therapy development💊
✔️ With Seqera, they reduced RNA-seq compute costs by 81% & WES costs by 55%, while cutting turnaround time from days to hours
📚 Read now: hubs.la/Q03RN_1l0
✔️ With Seqera, they reduced RNA-seq compute costs by 81% & WES costs by 55%, while cutting turnaround time from days to hours
📚 Read now: hubs.la/Q03RN_1l0
November 5, 2025 at 1:53 PM
We're delighted to share our latest case study with Champions Oncology: Scaling multi-omics analysis to accelerate cancer therapy development💊
✔️ With Seqera, they reduced RNA-seq compute costs by 81% & WES costs by 55%, while cutting turnaround time from days to hours
📚 Read now: hubs.la/Q03RN_1l0
✔️ With Seqera, they reduced RNA-seq compute costs by 81% & WES costs by 55%, while cutting turnaround time from days to hours
📚 Read now: hubs.la/Q03RN_1l0
Reposted by Lizzie Bolitho
💡 Nextflow 25.10 brings a significant performance boost to pipelines running on Amazon S3, both at the level of basic S3 operations and end-to-end workflow runs. 📊 Check out the benchmark comparisons against Nextflow 25.04! hubs.la/Q03RNm5q0
November 5, 2025 at 12:56 PM
💡 Nextflow 25.10 brings a significant performance boost to pipelines running on Amazon S3, both at the level of basic S3 operations and end-to-end workflow runs. 📊 Check out the benchmark comparisons against Nextflow 25.04! hubs.la/Q03RNm5q0
Reposted by Lizzie Bolitho
@nextflow.io powers the science. Seqera powers the organization. Discover 6 reasons why bioinformatics is hard and how Seqera helps. ⬇️
📚 Read the blog: hubs.la/Q03RLQfx0
🔗 Try Seqera for free: hubs.la/Q03RLQk70
Built for bioinformaticians. Trusted by enterprises.
📚 Read the blog: hubs.la/Q03RLQfx0
🔗 Try Seqera for free: hubs.la/Q03RLQk70
Built for bioinformaticians. Trusted by enterprises.
November 5, 2025 at 8:39 AM
@nextflow.io powers the science. Seqera powers the organization. Discover 6 reasons why bioinformatics is hard and how Seqera helps. ⬇️
📚 Read the blog: hubs.la/Q03RLQfx0
🔗 Try Seqera for free: hubs.la/Q03RLQk70
Built for bioinformaticians. Trusted by enterprises.
📚 Read the blog: hubs.la/Q03RLQfx0
🔗 Try Seqera for free: hubs.la/Q03RLQk70
Built for bioinformaticians. Trusted by enterprises.
Reposted by Lizzie Bolitho
🚀 The power of community-driven innovation in bioinformatics! At the #NextflowSummit, @evanfloden.bsky.social highlighted how every major advancement in @nextflow.io io has come from the community. 🌍 From pipelines to plugins, your contributions are fueling a flywheel of scientific progress
November 3, 2025 at 3:25 PM
🚀 The power of community-driven innovation in bioinformatics! At the #NextflowSummit, @evanfloden.bsky.social highlighted how every major advancement in @nextflow.io io has come from the community. 🌍 From pipelines to plugins, your contributions are fueling a flywheel of scientific progress
Reposted by Lizzie Bolitho
Are you ready for #Nextflovember!🤩 Join our upcoming Nextflow training sessions with @seqera.io:
📆 Durham, NC | Nov 13 | Nextflow Training and Sessions
📆 Online | Nov 17-21 | Nextflow Training Week
📆 Paris | Nov 18 | Nextflow Training and Sessions
More info below🧵
📆 Durham, NC | Nov 13 | Nextflow Training and Sessions
📆 Online | Nov 17-21 | Nextflow Training Week
📆 Paris | Nov 18 | Nextflow Training and Sessions
More info below🧵
November 3, 2025 at 4:31 PM
Are you ready for #Nextflovember!🤩 Join our upcoming Nextflow training sessions with @seqera.io:
📆 Durham, NC | Nov 13 | Nextflow Training and Sessions
📆 Online | Nov 17-21 | Nextflow Training Week
📆 Paris | Nov 18 | Nextflow Training and Sessions
More info below🧵
📆 Durham, NC | Nov 13 | Nextflow Training and Sessions
📆 Online | Nov 17-21 | Nextflow Training Week
📆 Paris | Nov 18 | Nextflow Training and Sessions
More info below🧵
Reposted by Lizzie Bolitho
🕐 Turn hours of orchestration and troubleshooting into minutes⚡
A key challenge Sano Genetics faced? Running complex #bioinformatics pipelines at scale while ensuring accurate and reproducible results. 🧵
A key challenge Sano Genetics faced? Running complex #bioinformatics pipelines at scale while ensuring accurate and reproducible results. 🧵
October 31, 2025 at 3:50 PM
🕐 Turn hours of orchestration and troubleshooting into minutes⚡
A key challenge Sano Genetics faced? Running complex #bioinformatics pipelines at scale while ensuring accurate and reproducible results. 🧵
A key challenge Sano Genetics faced? Running complex #bioinformatics pipelines at scale while ensuring accurate and reproducible results. 🧵
Reposted by Lizzie Bolitho
Missed out on the Nextflow training in Barcelona this week?
🎓 Join us for beginner-friendly Nextflow training in Paris on Nov 18 with the @seqera.io team. 4 hours of expert-led training, plus a certificate of attendance & exclusive swag!
Join us: seqera.io/events/seqer...
🎓 Join us for beginner-friendly Nextflow training in Paris on Nov 18 with the @seqera.io team. 4 hours of expert-led training, plus a certificate of attendance & exclusive swag!
Join us: seqera.io/events/seqer...
October 31, 2025 at 11:30 AM
Missed out on the Nextflow training in Barcelona this week?
🎓 Join us for beginner-friendly Nextflow training in Paris on Nov 18 with the @seqera.io team. 4 hours of expert-led training, plus a certificate of attendance & exclusive swag!
Join us: seqera.io/events/seqer...
🎓 Join us for beginner-friendly Nextflow training in Paris on Nov 18 with the @seqera.io team. 4 hours of expert-led training, plus a certificate of attendance & exclusive swag!
Join us: seqera.io/events/seqer...
Reposted by Lizzie Bolitho
In pharma, scale means managing complexity across the broader ecosystem, not just pipelines
True scale relies on alignment across 4 connected axes: code, compute, teams & projects:
🔹Clean code enables reliable projects
🔹Projects demand scalable compute
🔹Collaboration across teams must be easy
True scale relies on alignment across 4 connected axes: code, compute, teams & projects:
🔹Clean code enables reliable projects
🔹Projects demand scalable compute
🔹Collaboration across teams must be easy
October 31, 2025 at 9:14 AM
In pharma, scale means managing complexity across the broader ecosystem, not just pipelines
True scale relies on alignment across 4 connected axes: code, compute, teams & projects:
🔹Clean code enables reliable projects
🔹Projects demand scalable compute
🔹Collaboration across teams must be easy
True scale relies on alignment across 4 connected axes: code, compute, teams & projects:
🔹Clean code enables reliable projects
🔹Projects demand scalable compute
🔹Collaboration across teams must be easy
Reposted by Lizzie Bolitho
We're under 1 hour away from @nextflow.io training and the @nf-co.re hackathon here in Barcelona! 👩💻 Our team is ready and excited for 2 days of learning, hacking and collaboration. Thrilled to welcome newcomers ready to push the boundaries of what's possible with Nextflow!
October 28, 2025 at 8:20 AM
We're under 1 hour away from @nextflow.io training and the @nf-co.re hackathon here in Barcelona! 👩💻 Our team is ready and excited for 2 days of learning, hacking and collaboration. Thrilled to welcome newcomers ready to push the boundaries of what's possible with Nextflow!
Reposted by Lizzie Bolitho
What's New Product Webinar | 🗓️ Nov 19
At the #NextflowSummit, we announced exciting product updates spanning R&D, GxP, data improvements & agentic research
Join our upcoming webinar where we'll showcase the latest innovations through live demos and Q&A with our product team hubs.la/Q03Q9Lh40
At the #NextflowSummit, we announced exciting product updates spanning R&D, GxP, data improvements & agentic research
Join our upcoming webinar where we'll showcase the latest innovations through live demos and Q&A with our product team hubs.la/Q03Q9Lh40
October 27, 2025 at 9:43 AM
What's New Product Webinar | 🗓️ Nov 19
At the #NextflowSummit, we announced exciting product updates spanning R&D, GxP, data improvements & agentic research
Join our upcoming webinar where we'll showcase the latest innovations through live demos and Q&A with our product team hubs.la/Q03Q9Lh40
At the #NextflowSummit, we announced exciting product updates spanning R&D, GxP, data improvements & agentic research
Join our upcoming webinar where we'll showcase the latest innovations through live demos and Q&A with our product team hubs.la/Q03Q9Lh40
Reposted by Lizzie Bolitho
New Case Study with Strand Life Sciences🎉
Strand faced growing demands across pharma, diagnostics, and precision medicine clients. The bottleneck: their existing workflow management system🧵
Strand faced growing demands across pharma, diagnostics, and precision medicine clients. The bottleneck: their existing workflow management system🧵
October 21, 2025 at 1:51 PM
New Case Study with Strand Life Sciences🎉
Strand faced growing demands across pharma, diagnostics, and precision medicine clients. The bottleneck: their existing workflow management system🧵
Strand faced growing demands across pharma, diagnostics, and precision medicine clients. The bottleneck: their existing workflow management system🧵