Chromatin labeling and imaging group
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andimaging.bsky.social
Chromatin labeling and imaging group
@andimaging.bsky.social
MPI for Multidisciplinary Sciences
Fluorescent #probes for live-cell #nanoscopy: #STED, #MINFLUX and #confocal. We do the job, all of you judge if it is useful!
New preprint! The remarkable stability of proline-derived cofactors opens efficient DNA labeling possibility using methyltransferases even at harsh conditions.

www.biorxiv.org/content/10.6...

Congratulations to Ruta and Jonas .

#Biochemistry #DNA #Fluorescence
January 26, 2026 at 5:57 AM
Wish all of You Merry Christmas and a Happy New Year!!!

Enjoy AI-generated card for Chromatin labeling and imaging @andimaging.bsky.social
December 29, 2025 at 5:48 AM
New preprint! We systematically evaluate red-shifted rhodamine-based DNA probes for in vivo imaging. Congratulations to Kamila and Shalini et al!
Job done at @mpi-nat.bsky.social and @imprsgs.bsky.social ! Read more if you want to know which isomer is the best: www.biorxiv.org/content/10.6... .
December 17, 2025 at 5:47 AM
6SiR-C3-NextA is bright far-red, cell-permeable probe for live-cell selective HDAC6 imaging. Congratulations to Van-Thang Nguyen et al. @vanthang.bsky.social from @imprsgs.bsky.social ! Developed at @mpi-nat.bsky.social nat.bsky.social and published on BioRxiv www.biorxiv.org/content/10.6... .
December 15, 2025 at 6:50 AM
Celebrating 2nd PhD student of the group! 🎓 Van-Thang Nguyen (@vanthang.bsky.social) from the Chromatin Labeling & Imaging group successfully defended his thesis through the @imprsgs.bsky.social program at @mpi-nat.bsky.social. A smooth and impressive defense — and his paper is coming soon… 👀📄
December 13, 2025 at 8:14 AM
We have introduced a new biocompatible sulfonium-based building block for generation of non-cytotoxic covalent fluorescent probes.
The proof-of-concept paper is out in Nature Communications: rdcu.be/eUn8F
Great job done by @mauvray.bsky.social at @mpi-nat.bsky.social Enjoy reading!
December 12, 2025 at 12:16 PM
Happy DNA day!!! 😀
#DNA #Chromatin #Research
April 25, 2025 at 6:12 AM
The updated Team of @andimaging.bsky.social .

We will keep you posted with our newest developments.
March 8, 2025 at 6:13 PM
Reposted by Chromatin labeling and imaging group
Thrilled to share with you our work on covalent probes! By introducing a biocompatible sulfonium-based cleavable linker, we developed a series of fluorescent probes that can label covalently endogenous tubulin in various cell lines.

www.biorxiv.org/content/10.1...

#Chembio #FluorescenceFriday
January 31, 2025 at 11:00 AM
We have introduced a new biocompatible sulfonium-based building block for generation of non-cytotoxic covalent fluorescent probes. The proof-of-concept paper is on BioRxiv: https://doi.org/10.1101/2025.01.27.635008 . Great job done by @MarieAuvray4 at @mpi_nat ! Enjoy reading!
Biocompatible sulfonium-based covalent probes for endogenous tubulin fluorescence nanoscopy in live and fixed cells
Fluorescent probes enable the visualization of dynamic cellular processes with high precision, particularly when coupled with super-resolution imaging techniques that surpass the diffraction limit. Traditional methods include fluorescent protein fusion (e.g., GFP) or organic fluorophores linked to ligands targeting the protein of interest. However, these approaches often introduce functional disruptions or ligand-associated biological effects. Herein, we address these challenges by developing covalent fluorescent probes for endogenous tubulin, a critical cytoskeletal protein involved in processes such as cell movement, division, and biomolecule trafficking. Using well-known tubulin binder cabazitaxel and cell permeable fluorophore silicon-rhodamine—as a basis, we introduce a novel biocompatible cleavable linker containing a sulfonium center. This allowed the construction of the optimized probe , 6-SiR- o -C9-CTX , demonstrating excellent cell permeability, fluorogenic properties, and the ability to covalently label tubulin across various human cell lines. Importantly, the targeting moiety could be washed out while preserving tubulin staining, ensuring minimal disruption of tubulin function. This labeling technique is compatible with STED nanoscopy in both live and fixed cells, offering a powerful high-resolution imaging tool. ### Competing Interest Statement G.L. is a co-inventor on the patent (EP2748173B1 and US9346957B2, applicant EPFL) describing SiR and its derivatives.
doi.org
February 1, 2025 at 4:14 PM
Wish all of You Merry Christmas and a Happy New Year!!! Enjoy DALL-E AI-generated card for Chromatin labeling and imaging @AndImaging
February 1, 2025 at 4:14 PM
Finally, we have the 1st PhD student Shalini Pradhan @ShaliniPradha19 from Chromatin labeling and imaging group from @IMPRS_GS program at @mpi_nat . It was challenging to make the full program in a single day, but we succeed.
February 1, 2025 at 4:14 PM
Need to make perfect STED image? Check the primer below.

Little secret: it has useful stuff in the Supplementary Information 😉 https://x.com/MethodsPrimers/status/1821500388614254743
February 1, 2025 at 4:14 PM
The updated Team of @AndImaging . We will keep you posted with our newest developments. Follow us:
@MarieAuvray4
@J_Bucevicius
@GerasRuta
@ShaliniPradha19
@GeorgijKostiuk
@Eyeshield_VN_21
@D_Bubnyte
February 1, 2025 at 4:14 PM
Happy #DNADay! See how approx. two metres of DNA looks under #STORM and #STED microscopes.
February 1, 2025 at 4:14 PM
The updated Team of @AndImaging . We will keep you posted with our newest developments. Follow us:
@MarieAuvray4
@J_Bucevicius
@GerasRuta
@ShaliniPradha19
@GeorgijKostiuk
@Eyeshield_VN_21
@D_Bubnyte
@Marce_Claudia_
February 1, 2025 at 4:14 PM
Merry Christmas and Happy New Year!!!
February 1, 2025 at 4:14 PM
Excellent collaboration with Laura Manelytė from @uni_regensburg :

Biochemical and cellular insights into the Baz2B protein, a non-catalytic subunit of the chromatin remodeling complex https://academic.oup.com/nar/article/doi/10.1093/nar/gkad1096/7449497
February 1, 2025 at 4:13 PM
The updated Team of @AndImaging . We will keep you posted with our newest developments. Follow us:
@MarieAuvray4
@J_Bucevicius
@GerasRuta
@SaladinLazare
@ShaliniPradha19
@GeorgijKostiuk
@Eyeshield_VN_21 @D_Bubnyte
February 1, 2025 at 4:13 PM
We are developing fluorescent probes for live-cell far-field nanoscopy imaging. Here is our team:
February 1, 2025 at 4:13 PM
Perfect application of our DNA probe: https://x.com/guillermo_orsi/status/1679854382592974851
February 1, 2025 at 4:13 PM
Hot question in Germany discussed by @BMBF_Bund :

How long should be the postdoctoral phase of researchers?

Have a nice weekend, and thanks for your opinion!

#WissZeitVG #AcademicTwitter #Germany #research #postdocs
February 1, 2025 at 4:13 PM
Our newest review paper about sequence-specific DNA labelling for fluorescence microscopy is out in Biosensors and Bioelectronics journal: https://t.co/6fZfHtFWKi . Enjoy reading! #Biology #Bioimaging #DNA #CRISPR #TALE #labeling #Fluorescence #Microscopy #Review
February 1, 2025 at 4:13 PM