adamklie.bsky.social
@adamklie.bsky.social
Thanks @igvfconsortium.bsky.social for sharing our work on Bluesky! Very useful in its current form, but major updates on the way. Stay tuned.
We’re excited to share the EUGENe toolkit—a powerful Python tool for building and evaluating sequence-based deep learning models in genomics! 🧬
EUGENe streamlines data management, model training, and prediction interpretation, making it easier to analyze biological sequences.
November 21, 2024 at 8:34 PM
Mostly liked this post so that I can finish Blue Sky's "Getting Started" tasks but Jacob's pretty cool too
My goal is to understand the regulatory role of every nucleotide in the genome, and how this changes across every cell in the human body.

If you are interested in doing a Ph.D. with me at UMass Chan Medical (Genomics and Comp Bio Department), see the links below. Deadline is Dec 1st.
November 18, 2024 at 7:14 PM
Reposted
🧵 Bioinformatics faces a critical challenge: despite its importance, software quality often falls short due to the lack of proper development practices.

In our latest paper, we advocate for improving software quality in bioinformatics through teamwork.

academic.oup.com/bioinformati...
November 18, 2024 at 2:48 PM