andrey a
@aandreev.bsky.social
microscopy, data etc
aandreev.net for info
aandreev.net for info
Reposted by andrey a
When I saw this fluorescent green dinosaur at the shops today, it was an instant "must buy". 😅🧪🧬🦕
The #DIYNAFLUOR name and logo started out as a bit of a joke, but ultimately they have really helped catch peoples attention for our open-source DIY DNA fluorometer project.- tinyurl.com/yfh33dsx
The #DIYNAFLUOR name and logo started out as a bit of a joke, but ultimately they have really helped catch peoples attention for our open-source DIY DNA fluorometer project.- tinyurl.com/yfh33dsx
March 22, 2025 at 5:25 AM
When I saw this fluorescent green dinosaur at the shops today, it was an instant "must buy". 😅🧪🧬🦕
The #DIYNAFLUOR name and logo started out as a bit of a joke, but ultimately they have really helped catch peoples attention for our open-source DIY DNA fluorometer project.- tinyurl.com/yfh33dsx
The #DIYNAFLUOR name and logo started out as a bit of a joke, but ultimately they have really helped catch peoples attention for our open-source DIY DNA fluorometer project.- tinyurl.com/yfh33dsx
at some point will release adaptors for Thorlabs BBD302 XY stage controller and BPC301 piezo controller
Also Pollux linear stage and Picard filter wheel
And some general guidance for developing python-based device adapters for µManager
Also Pollux linear stage and Picard filter wheel
And some general guidance for developing python-based device adapters for µManager
next stop: using .NET -> Python bindings to write adapters for Thorlabs stages
github.com/Thorlabs/Mot...
github.com/Thorlabs/Mot...
Motion_Control_Examples/Python/Benchtop/BPCXXX/BPC3XX_pythonnet.py at main · Thorlabs/Motion_Control_Examples
Software examples for Thorlabs motion control products (e.g. T-Cube, K-Cube, and benchtop brushless, DC, stepper, and Piezo motor controllers) - Thorlabs/Motion_Control_Examples
github.com
February 16, 2025 at 4:15 AM
at some point will release adaptors for Thorlabs BBD302 XY stage controller and BPC301 piezo controller
Also Pollux linear stage and Picard filter wheel
And some general guidance for developing python-based device adapters for µManager
Also Pollux linear stage and Picard filter wheel
And some general guidance for developing python-based device adapters for µManager
next stop: using .NET -> Python bindings to write adapters for Thorlabs stages
github.com/Thorlabs/Mot...
github.com/Thorlabs/Mot...
Motion_Control_Examples/Python/Benchtop/BPCXXX/BPC3XX_pythonnet.py at main · Thorlabs/Motion_Control_Examples
Software examples for Thorlabs motion control products (e.g. T-Cube, K-Cube, and benchtop brushless, DC, stepper, and Piezo motor controllers) - Thorlabs/Motion_Control_Examples
github.com
February 13, 2025 at 10:42 AM
next stop: using .NET -> Python bindings to write adapters for Thorlabs stages
github.com/Thorlabs/Mot...
github.com/Thorlabs/Mot...
just wrote my first MicroManager device adapter for a Picard filter wheel (LabView and C# SDK available but i ain't touching that)
using PyDevice github.com/micro-manage...
cost me completely destroyed python env and MM installation on test machine and like 4 hours
using PyDevice github.com/micro-manage...
cost me completely destroyed python env and MM installation on test machine and like 4 hours
mmCoreAndDevices/DeviceAdapters/PyDevice at main · micro-manager/mmCoreAndDevices
Micro-Manager's device control layer, written in C++ - micro-manager/mmCoreAndDevices
github.com
January 31, 2025 at 12:16 AM
just wrote my first MicroManager device adapter for a Picard filter wheel (LabView and C# SDK available but i ain't touching that)
using PyDevice github.com/micro-manage...
cost me completely destroyed python env and MM installation on test machine and like 4 hours
using PyDevice github.com/micro-manage...
cost me completely destroyed python env and MM installation on test machine and like 4 hours
anyone using Thorlabs filterwheel with micro-manager? How do I make acquisition wait for wheel to stop moiving lol
January 27, 2025 at 9:45 PM
anyone using Thorlabs filterwheel with micro-manager? How do I make acquisition wait for wheel to stop moiving lol
Best present from PI to the grad students: clear expectations. Grab your free template here: htmlpreview.github.io?https://gith...
January 2, 2025 at 7:23 PM
Best present from PI to the grad students: clear expectations. Grab your free template here: htmlpreview.github.io?https://gith...
Reposted by andrey a
November 19, 2024 at 6:53 AM
if you do mouse brain imaging through glass window: how to make microscope orthogonal to the window: opg.optica.org/boe/fulltext...
December 24, 2024 at 2:32 AM
if you do mouse brain imaging through glass window: how to make microscope orthogonal to the window: opg.optica.org/boe/fulltext...
Microscopy peeps: If you could teach 1 thing to users, what would it be?
For example: geometrical optics/aberrations/RI theory? maybe some electrical thing? how lasers work? where vibrations come from? Why images are blurry?
For example: geometrical optics/aberrations/RI theory? maybe some electrical thing? how lasers work? where vibrations come from? Why images are blurry?
December 20, 2024 at 5:35 PM
Microscopy peeps: If you could teach 1 thing to users, what would it be?
For example: geometrical optics/aberrations/RI theory? maybe some electrical thing? how lasers work? where vibrations come from? Why images are blurry?
For example: geometrical optics/aberrations/RI theory? maybe some electrical thing? how lasers work? where vibrations come from? Why images are blurry?
am i dumb? how is noise16 (hamamatsu orca "dark" image) has 4x compression ratio?? src www.biorxiv.org/content/10.1...
December 17, 2024 at 6:29 PM
am i dumb? how is noise16 (hamamatsu orca "dark" image) has 4x compression ratio?? src www.biorxiv.org/content/10.1...
TIL @nvladimus.bsky.social has a blog nvladimus.medium.com/achromat-inv...
Invention of achromatic lens: a battle of intellectuals
Ideas that shaped modern optics
nvladimus.medium.com
December 16, 2024 at 6:12 AM
TIL @nvladimus.bsky.social has a blog nvladimus.medium.com/achromat-inv...
I love when companies release technical notes www.elveflow.com/microfluidic...
How do you synchronize a microscope with a microfluidic perfusion system?
This application note describes how to synchronize liquid perfusion and imaging using a microscope with a microfluidic perfusion system
www.elveflow.com
December 16, 2024 at 6:09 AM
I love when companies release technical notes www.elveflow.com/microfluidic...
company that sells parts for microscopy, optomechanics, light sources and more also publishes comic book www.optosigma.com/us_en/projec...
December 7, 2024 at 8:08 PM
company that sells parts for microscopy, optomechanics, light sources and more also publishes comic book www.optosigma.com/us_en/projec...
Working on Full-Stack Microscopy Handbook
Not an encyclopedia on everything that goes in microscopy experiments, but a guide to identify starting point when you need to know something specific or have blind spots
Example code, designs, checklist and a lot of links to sources
Not an encyclopedia on everything that goes in microscopy experiments, but a guide to identify starting point when you need to know something specific or have blind spots
Example code, designs, checklist and a lot of links to sources
December 5, 2024 at 7:45 PM
Working on Full-Stack Microscopy Handbook
Not an encyclopedia on everything that goes in microscopy experiments, but a guide to identify starting point when you need to know something specific or have blind spots
Example code, designs, checklist and a lot of links to sources
Not an encyclopedia on everything that goes in microscopy experiments, but a guide to identify starting point when you need to know something specific or have blind spots
Example code, designs, checklist and a lot of links to sources
have you ever used MEETOPTICS catalogue? meetoptics.com
MEETOPTICS | Search & Compare Quality Optics
MEETOPTICS lets you search for and compare high quality optical components from providers around the world.
meetoptics.com
December 5, 2024 at 7:39 PM
have you ever used MEETOPTICS catalogue? meetoptics.com
bought another domain name :-( ppooppy.com
PPOOPPY💩com - DIY poop bag dispencers
Discover and install DIY poop bag dispencers for your neighborhood
ppooppy.com
December 3, 2024 at 8:52 PM
bought another domain name :-( ppooppy.com
TIL @thorlabs.bsky.social makes breakout board for arduino www.thorlabs.com/newgrouppage...
November 23, 2024 at 9:44 AM
TIL @thorlabs.bsky.social makes breakout board for arduino www.thorlabs.com/newgrouppage...
what happened with the Flamingo microscope project? morgridge.org/research/lab...
The Flamingo Project - Morgridge Institute for Research
Making powerful microscopy portable and affordable It’s time to rethink how we use microscopes. Over the centuries, these amazing instruments have become highly complex, delicate and nearly impossible...
morgridge.org
November 21, 2024 at 3:04 AM
what happened with the Flamingo microscope project? morgridge.org/research/lab...
learning about IMC, working on a demo notebooks for analyzing imaging mass-cytometry
February 11, 2024 at 5:36 PM
learning about IMC, working on a demo notebooks for analyzing imaging mass-cytometry
there is no official way to run Napari GUI from jupyter notebook on a remote host?
February 10, 2024 at 7:12 PM
there is no official way to run Napari GUI from jupyter notebook on a remote host?
zelux 1.6MP mono camera (thorlabs packaging) is dropping frames and can't sustain more than 15fps full-frame
Using micro-manager as acquisition software. Any solution?
Using micro-manager as acquisition software. Any solution?
November 8, 2023 at 11:00 PM
zelux 1.6MP mono camera (thorlabs packaging) is dropping frames and can't sustain more than 15fps full-frame
Using micro-manager as acquisition software. Any solution?
Using micro-manager as acquisition software. Any solution?
Reposted by andrey a
I'm so delighted to buy some custom art for my office! These happy cells capture the joy I still feel for seeing data from our Cell Painting assay 💕
Shout out to Kari Herrington for her skills! (kah-sage.com)
Shout out to Kari Herrington for her skills! (kah-sage.com)
November 7, 2023 at 5:09 PM
I'm so delighted to buy some custom art for my office! These happy cells capture the joy I still feel for seeing data from our Cell Painting assay 💕
Shout out to Kari Herrington for her skills! (kah-sage.com)
Shout out to Kari Herrington for her skills! (kah-sage.com)