#refseqR
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jdieramon.bsky.social
🧬 The Aux/IAA gene family—key regulators of auxin signaling and plant development—has just been characterized in Asparagus 🌱
📄 shorturl.at/msQ2k

With #refseqR, go from protein IDs ➡️ transcript IDs ➡️ fetch transcript features for all isoforms—fast & reproducible.

#RStats #bioinformatics 🧪⚙️
June 8, 2025 at 9:54 PM
jdieramon.bsky.social
The auxin response factor (ARF) gene family in the #chickpea reference genome includes 24 loci, encoding up to 44 protein isoforms. 🌱🧬 With the #refseqR package, you can easily go from gene IDs ➡️ transcript IDs ➡️ fetch CDS sequences for all variants—fast & reproducible! ⚙️📦 #RStats
June 1, 2025 at 3:15 PM
jabi-conference.bsky.social
Es el turno de Jose Die, que nos presenta la herramienta refseqR, útil para hacer consultas y consultar registros de la colección de datos de RefSeq, del NCBI 🔎
May 13, 2025 at 10:49 AM
jdieramon.bsky.social
How to quickly retrieve the sequences from your favorite
#NCBI records.
#Bioinformatics #Genomics #DataScience #RStats #refseqR
December 30, 2024 at 5:30 PM
jdieramon.bsky.social
How to quickly retrieve the gene descriptions from your favorite #NCBI records.
#Bioinformatics #Genomics #DataScience #RStats #refseqR
December 27, 2024 at 2:19 PM
jdieramon.bsky.social
How to quickly retrieve isoforms from #NCBI.
#Bioinformatics #Genomics #DataScience #RStats
#refseqR
December 26, 2024 at 9:34 AM
jdieramon.bsky.social
Effortlessly retrieve sequences from #NCBI databases! #refseqR Your gateway to unlocking biological data starts here. 🧬✨ #Bioinformatics #Genomics #DataScience #RStats

Manuscript available from BioinfoAdv and pack. from
#CRAN cran.r-project.org/package=refs...
December 10, 2024 at 9:07 PM
jdieramon.bsky.social
slides available : jdieramon.quarto.pub/refseqr--wor...
November 29, 2024 at 12:33 PM
jdieramon.bsky.social
Come join the workshop this Wednesday, the 27th, where I'll present #refseqR, a new R package for streamlined computational tasks on RefSeq entries (GenBank, NCBI). Don’t miss it! 🚀 #RStats #Bioinformatics
Available from CRAN: cran.rstudio.com/web/packages...
November 26, 2024 at 6:53 PM
cranupdates.bsky.social
Updates on CRAN: bio3d (2.4-5), bravo (3.2.2), dexisensitivity (1.0.1), elhmc (1.2.1), folda (0.2.0), gcbd (0.2.7), modEvA (3.20), refseqR (1.1.5), rice (0.4.0), rliger (2.1.0)
October 30, 2024 at 2:18 AM
cranberriesfeed.bsky.social
CRAN updates: elhmc modEvA refseqR rice #rstats
October 30, 2024 at 1:03 AM
cranupdates.bsky.social
Updates on CRAN: ATQ (0.2.3), bidask (2.0.6), fragility (1.5), ichimoku (1.5.4), refseqR (1.1.4)
August 18, 2024 at 9:14 PM
cranberriesfeed.bsky.social
CRAN updates: refseqR #rstats
August 18, 2024 at 6:02 PM
cranupdates.bsky.social
Updates on CRAN: refseqR (1.1.2), sampcompR (0.2.1), sox (1.2), spatstat (3.1-1), spatstat.explore (3.3-1), spatstat.geom (3.3-2), spatstat.linnet (3.2-1), spatstat.model (3.3-1), spatstat.random (3.3-1)
July 15, 2024 at 9:16 PM
cranberriesfeed.bsky.social
CRAN updates: CovRegRF fdaPDE FeatureExtraction NMsim parallelpam protti refseqR sox #rstats
July 15, 2024 at 7:02 PM
cranupdates.bsky.social
New on CRAN: refseqR (1.0.2). View at https://CRAN.R-project.org/package=refseqR
May 22, 2024 at 1:18 PM
cranberriesfeed.bsky.social
New CRAN package refseqR with initial version 1.0.2
#rstats
https://cran.r-project.org/package=refseqR
CRAN - Package refseqR
https://cran.r-project.org/package=refseqR
cran.r-project.org
May 22, 2024 at 10:02 AM
cranupdates.bsky.social
Removed from CRAN: hexFinder (0.8.2), rdss (1.0.10), refseqR (1.0.1)
April 30, 2024 at 9:16 AM
cranberriesfeed.bsky.social
CRAN removals: hexFinder rdss refseqR #rstats
April 30, 2024 at 8:02 AM
cranupdates.bsky.social
New on CRAN: refseqR (1.0.1). View at https://CRAN.R-project.org/package=refseqR
April 1, 2024 at 5:16 PM
cranberriesfeed.bsky.social
New CRAN package refseqR with initial version 1.0.1
#rstats
https://cran.r-project.org/package=refseqR
Object not found!
https://cran.r-project.org/package=refseqR
cran.r-project.org
April 1, 2024 at 12:02 PM