Big week! All the Nextflow Summit 2025 talks are now on YouTube: blog.stephenturner.us/p/nextflow-s...
Nextflow Summit 2025 Talks on YouTube
29 talks from the 2025 Nextflow Summit are now available on YouTube
blog.stephenturner.us
November 11, 2025 at 10:49 AM
Big week! All the Nextflow Summit 2025 talks are now on YouTube: blog.stephenturner.us/p/nextflow-s...
Don't miss your chance at learning Nextflow from the team that created Nextflow👇Beginner-friendly training happening next week in Paris! Plus, @evanfloden.bsky.social will be in attendance!
⏳ Last chance to register for Nextflow Training & Sessions in Paris next week! Join our beginner-friendly training to learn directly from the creators of @nextflow.io, followed by an afternoon of expert talks and live demos from industry leaders.🌟
🔗 Secure your place now: hubs.la/Q03Sy_Yk0
🔗 Secure your place now: hubs.la/Q03Sy_Yk0
November 11, 2025 at 10:36 AM
Don't miss your chance at learning Nextflow from the team that created Nextflow👇Beginner-friendly training happening next week in Paris! Plus, @evanfloden.bsky.social will be in attendance!
⏳ Last chance to register for Nextflow Training & Sessions in Paris next week! Join our beginner-friendly training to learn directly from the creators of @nextflow.io, followed by an afternoon of expert talks and live demos from industry leaders.🌟
🔗 Secure your place now: hubs.la/Q03Sy_Yk0
🔗 Secure your place now: hubs.la/Q03Sy_Yk0
November 11, 2025 at 10:32 AM
⏳ Last chance to register for Nextflow Training & Sessions in Paris next week! Join our beginner-friendly training to learn directly from the creators of @nextflow.io, followed by an afternoon of expert talks and live demos from industry leaders.🌟
🔗 Secure your place now: hubs.la/Q03Sy_Yk0
🔗 Secure your place now: hubs.la/Q03Sy_Yk0
Nextpie: a web-based reporting tool and database for reproducible nextflow pipelines academic.oup.com/bioinformati... 🧬🖥️🧪 github.com/bishwaG/Next...
November 10, 2025 at 5:01 PM
Nextpie: a web-based reporting tool and database for reproducible nextflow pipelines academic.oup.com/bioinformati... 🧬🖥️🧪 github.com/bishwaG/Next...
Nextflow has been a hot topic at the forum for the past two editions, and the excitement just keeps growing. It’s always fun when someone says, “Marcel, you’ve got to tell my friend/boss/students about Nextflow!”
November 10, 2025 at 2:18 PM
Nextflow has been a hot topic at the forum for the past two editions, and the excitement just keeps growing. It’s always fun when someone says, “Marcel, you’ve got to tell my friend/boss/students about Nextflow!”
Amazing work from our Nextflow Ambassadors in Brazil last week! 👏
What a week at the Natal Bioinformatics Forum, bringing together a dynamic community of bioinformatics professionals, researchers & industry leaders.🌟 Huge shoutout to @nextflow.io Ambassadors Gleison Azevedo, João Cavalcante & Julia Apolonio for their support at our booth! 🙌
November 10, 2025 at 1:54 PM
Amazing work from our Nextflow Ambassadors in Brazil last week! 👏
We’ve just kicked off the @nextflow.io course with @passdan.bsky.social 🚀
Over the next 3 days, participants will learn how to build, run, and scale reproducible workflows for big data and #bioinformatics — from basics to advanced concepts — using Nextflow across any computing environment. 💻⚡
Over the next 3 days, participants will learn how to build, run, and scale reproducible workflows for big data and #bioinformatics — from basics to advanced concepts — using Nextflow across any computing environment. 💻⚡
November 10, 2025 at 12:35 PM
We’ve just kicked off the @nextflow.io course with @passdan.bsky.social 🚀
Over the next 3 days, participants will learn how to build, run, and scale reproducible workflows for big data and #bioinformatics — from basics to advanced concepts — using Nextflow across any computing environment. 💻⚡
Over the next 3 days, participants will learn how to build, run, and scale reproducible workflows for big data and #bioinformatics — from basics to advanced concepts — using Nextflow across any computing environment. 💻⚡
📣 New Computational Genomics seminar
📋 From reproducible to reusable Nextflow workflows in the ShareFAIR project
🗣️ Sarah Cohen Boulakia - @dataiainstitute.bsky.social
📆 Nov 11 - ⏰ 16:00 CET
📍 #PRBB 473.10 Aula
📋 From reproducible to reusable Nextflow workflows in the ShareFAIR project
🗣️ Sarah Cohen Boulakia - @dataiainstitute.bsky.social
📆 Nov 11 - ⏰ 16:00 CET
📍 #PRBB 473.10 Aula
November 10, 2025 at 10:53 AM
📣 New Computational Genomics seminar
📋 From reproducible to reusable Nextflow workflows in the ShareFAIR project
🗣️ Sarah Cohen Boulakia - @dataiainstitute.bsky.social
📆 Nov 11 - ⏰ 16:00 CET
📍 #PRBB 473.10 Aula
📋 From reproducible to reusable Nextflow workflows in the ShareFAIR project
🗣️ Sarah Cohen Boulakia - @dataiainstitute.bsky.social
📆 Nov 11 - ⏰ 16:00 CET
📍 #PRBB 473.10 Aula
HI-FEVER: a Nextflow pipeline for the high-throughput discovery and annotation of endogenous viral elements. #EndogenousViralElements #EukaryoticHostGenomes #Genomics #Bioinformatics 🧪🧬 🖥️
academic.oup.com/bioinformati...
academic.oup.com/bioinformati...
November 9, 2025 at 6:05 PM
HI-FEVER: a Nextflow pipeline for the high-throughput discovery and annotation of endogenous viral elements. #EndogenousViralElements #EukaryoticHostGenomes #Genomics #Bioinformatics 🧪🧬 🖥️
academic.oup.com/bioinformati...
academic.oup.com/bioinformati...
PathogenSurveillance: an automated pipeline for population genomic analyses and pathogen identification. #PathogenSurveillance #Nextflow #Bioinformatics #WGS #PathogenIdentification @biorxivpreprint.bsky.social
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
November 9, 2025 at 5:49 PM
PathogenSurveillance: an automated pipeline for population genomic analyses and pathogen identification. #PathogenSurveillance #Nextflow #Bioinformatics #WGS #PathogenIdentification @biorxivpreprint.bsky.social
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
What's new this week in AI, data science, bioinfo: LLMs for learning to code, #Rstats updates (R Data Scientist, R Weekly), RAG, layoffs & AI, DuckDB for data science, Anthropic+Iceland, AI in science, AI in drug discovery, Nextflow & pathogen surveillance doi.org/10.59350/28g...
Weekly Recap (Nov 7, 2025)
LLMs for learning to code, R updates (R Data Scientist, R Weekly), RAG, layoffs & AI, DuckDB for data science, Anthropic+Iceland, AI in science, AI in drug discovery, Nextflow & pathogen surveillance
doi.org
November 7, 2025 at 2:04 PM
What's new this week in AI, data science, bioinfo: LLMs for learning to code, #Rstats updates (R Data Scientist, R Weekly), RAG, layoffs & AI, DuckDB for data science, Anthropic+Iceland, AI in science, AI in drug discovery, Nextflow & pathogen surveillance doi.org/10.59350/28g...
What's new this week in AI, data science, bioinfo: LLMs for learning to code, #Rstats updates (R Data Scientist, R Weekly), RAG, layoffs & AI, DuckDB for data science, Anthropic+Iceland, AI in science, AI in drug discovery, Nextflow & pathogen surveillance doi.org/10.59350/28g...
Weekly Recap (Nov 7, 2025)
LLMs for learning to code, R updates (R Data Scientist, R Weekly), RAG, layoffs & AI, DuckDB for data science, Anthropic+Iceland, AI in science, AI in drug discovery, Nextflow & pathogen surveillance
doi.org
November 7, 2025 at 2:02 PM
What's new this week in AI, data science, bioinfo: LLMs for learning to code, #Rstats updates (R Data Scientist, R Weekly), RAG, layoffs & AI, DuckDB for data science, Anthropic+Iceland, AI in science, AI in drug discovery, Nextflow & pathogen surveillance doi.org/10.59350/28g...
FREE Nextflow Training in Durham, North Carolina next week with @seqera.io, the creators of Nextflow! Register below🎓
Seqera Sessions Durham is just around the corner!🚀 Join us next week on November 13 for a day of hands-on learning and discovery in the heart of North Carolina’s Research Triangle.
Register now: hubs.la/Q03S1P6T0
Register now: hubs.la/Q03S1P6T0
Seqera Sessions, Durham
For the first time ever, Seqera Sessions is coming to North Carolina! Start your day with hands-on beginner Nextflow training, then stick around for an afternoon of expert talks, live demos, and netwo...
seqera.io
November 6, 2025 at 4:29 PM
FREE Nextflow Training in Durham, North Carolina next week with @seqera.io, the creators of Nextflow! Register below🎓
🚀 Kickstart your #Nextflow journey on Nov 17-21 at Nextflow Training Week! Work through one of the courses on the #Nextflow training portal using a GitHub Codespaces training environment pre-loaded with all software, code & example data. Register here: hubs.la/Q03RZxl80
November 6, 2025 at 8:33 AM
🚀 Kickstart your #Nextflow journey on Nov 17-21 at Nextflow Training Week! Work through one of the courses on the #Nextflow training portal using a GitHub Codespaces training environment pre-loaded with all software, code & example data. Register here: hubs.la/Q03RZxl80
Just found out #Nextflow supports job arrays 😅
Add `array` inside the `process { ... }` block, and it fixes “You have reached the rate limit of jobs submitted per hour” error.
Add `array
November 5, 2025 at 9:16 PM
Just found out #Nextflow supports job arrays 😅
Add `array` inside the `process { ... }` block, and it fixes “You have reached the rate limit of jobs submitted per hour” error.
Add `array
Running with data on AWS s3? Update to the latest version of @nextflow.io (25.10) and get some pretty tasty performance improvements for free 🤩
These kind of "under the hood" improvements can often go unnoticed, but it's this work that makes #Nextflow capable of powering huge analysis workflows 💪🏻
These kind of "under the hood" improvements can often go unnoticed, but it's this work that makes #Nextflow capable of powering huge analysis workflows 💪🏻
November 5, 2025 at 1:47 PM
Running with data on AWS s3? Update to the latest version of @nextflow.io (25.10) and get some pretty tasty performance improvements for free 🤩
These kind of "under the hood" improvements can often go unnoticed, but it's this work that makes #Nextflow capable of powering huge analysis workflows 💪🏻
These kind of "under the hood" improvements can often go unnoticed, but it's this work that makes #Nextflow capable of powering huge analysis workflows 💪🏻
💡 Nextflow 25.10 brings a significant performance boost to pipelines running on Amazon S3, both at the level of basic S3 operations and end-to-end workflow runs. 📊 Check out the benchmark comparisons against Nextflow 25.04! hubs.la/Q03RNm5q0
November 5, 2025 at 12:56 PM
💡 Nextflow 25.10 brings a significant performance boost to pipelines running on Amazon S3, both at the level of basic S3 operations and end-to-end workflow runs. 📊 Check out the benchmark comparisons against Nextflow 25.04! hubs.la/Q03RNm5q0
I want to invest my time learning snakemake or nextflow but I never sure which is more future-proof. Or probably it is irrelevant as there will be always new stuff anyways 🤪
November 5, 2025 at 12:41 PM
I want to invest my time learning snakemake or nextflow but I never sure which is more future-proof. Or probably it is irrelevant as there will be always new stuff anyways 🤪
Need a hand with your #Nextflow or #nfcore pipeline?
Join our weekly drop-in session — every Friday 10–11 CET with Daniel Straub (Uni Tübingen).
Ask questions, get tips, and connect with the community!
📍 Zoom: tinyurl.com/mwz84xvb
#Bioinformatics #OpenScience #NFDI4Microbiota
Join our weekly drop-in session — every Friday 10–11 CET with Daniel Straub (Uni Tübingen).
Ask questions, get tips, and connect with the community!
📍 Zoom: tinyurl.com/mwz84xvb
#Bioinformatics #OpenScience #NFDI4Microbiota
November 5, 2025 at 8:18 AM
Need a hand with your #Nextflow or #nfcore pipeline?
Join our weekly drop-in session — every Friday 10–11 CET with Daniel Straub (Uni Tübingen).
Ask questions, get tips, and connect with the community!
📍 Zoom: tinyurl.com/mwz84xvb
#Bioinformatics #OpenScience #NFDI4Microbiota
Join our weekly drop-in session — every Friday 10–11 CET with Daniel Straub (Uni Tübingen).
Ask questions, get tips, and connect with the community!
📍 Zoom: tinyurl.com/mwz84xvb
#Bioinformatics #OpenScience #NFDI4Microbiota
Learn how to do bioinformatics at scale! Nextflow is incredibly powerful for processing vast datasets in a reproducible way.
@nextflow.io
@nextflow.io
🚀 Only a few seats left!
Join our “Introduction to @nextflow.io” course (🗓️ 10–12 Nov) and learn how to build, run, and share scalable bioinformatics workflows with @passdan.bsky.social
www.physalia-courses.org/courses-work...
Join our “Introduction to @nextflow.io” course (🗓️ 10–12 Nov) and learn how to build, run, and share scalable bioinformatics workflows with @passdan.bsky.social
www.physalia-courses.org/courses-work...
November 4, 2025 at 4:35 PM
Learn how to do bioinformatics at scale! Nextflow is incredibly powerful for processing vast datasets in a reproducible way.
@nextflow.io
@nextflow.io
SPARKI: a tool for the statistical analysis of pathogen identification results academic.oup.com/bioinformati... 🧬🖥️🧪
#Rstats code: github.com/team113sange...
#Nextflow workflow: github.com/team113sange...
#Rstats code: github.com/team113sange...
#Nextflow workflow: github.com/team113sange...
November 4, 2025 at 3:00 PM
SPARKI: a tool for the statistical analysis of pathogen identification results academic.oup.com/bioinformati... 🧬🖥️🧪
#Rstats code: github.com/team113sange...
#Nextflow workflow: github.com/team113sange...
#Rstats code: github.com/team113sange...
#Nextflow workflow: github.com/team113sange...
Our PathogenSurveillance pipeline is out in bioRxiv. PathogenSurveillance is an open-source and automated Nextflow pipeline for population genomic analyses of WGS data. It is flexible, using both short and long read data, mixed samples of prokaryotes and eukaryotes.
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
PathogenSurveillance: an automated pipeline for population genomic analyses and pathogen identification
Whole genome sequencing (WGS) offers a comprehensive, organism-agnostic method that effectively meets the need for efficient, reliable, and standardized responses to emerging threats from pathogens an...
www.biorxiv.org
November 3, 2025 at 6:52 PM
Our PathogenSurveillance pipeline is out in bioRxiv. PathogenSurveillance is an open-source and automated Nextflow pipeline for population genomic analyses of WGS data. It is flexible, using both short and long read data, mixed samples of prokaryotes and eukaryotes.
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
Nov 18! @seqera.io Sessions is arriving in Paris for the very first time! 🚀 Kick off the day with practical, beginner-friendly Nextflow training, and stay for an afternoon packed with expert presentations, live demos, and networking opportunities
hubs.la/Q03RmXPW0
hubs.la/Q03RmXPW0
Seqera Sessions, Paris
Seqera Sessions is arriving in Paris for the very first time! Kick off the day with practical, beginner-friendly Nextflow training, and stay for an afternoon packed with expert presentations, live dem...
hubs.la
November 3, 2025 at 4:31 PM
Nov 18! @seqera.io Sessions is arriving in Paris for the very first time! 🚀 Kick off the day with practical, beginner-friendly Nextflow training, and stay for an afternoon packed with expert presentations, live demos, and networking opportunities
hubs.la/Q03RmXPW0
hubs.la/Q03RmXPW0
Nov 13! For the first time ever, @seqera.io Sessions is coming to North Carolina! 🎉Start your day with beginner Nextflow training, then stick around for an afternoon of expert talks, live demos, and networking
hubs.la/Q03RmTZ50
hubs.la/Q03RmTZ50
Seqera Sessions, Durham
For the first time ever, Seqera Sessions is coming to North Carolina! Start your day with hands-on beginner Nextflow training, then stick around for an afternoon of expert talks, live demos, and netwo...
hubs.la
November 3, 2025 at 4:31 PM
Nov 13! For the first time ever, @seqera.io Sessions is coming to North Carolina! 🎉Start your day with beginner Nextflow training, then stick around for an afternoon of expert talks, live demos, and networking
hubs.la/Q03RmTZ50
hubs.la/Q03RmTZ50
Are you ready for #Nextflovember!🤩 Join our upcoming Nextflow training sessions with @seqera.io:
📆 Durham, NC | Nov 13 | Nextflow Training and Sessions
📆 Online | Nov 17-21 | Nextflow Training Week
📆 Paris | Nov 18 | Nextflow Training and Sessions
More info below🧵
📆 Durham, NC | Nov 13 | Nextflow Training and Sessions
📆 Online | Nov 17-21 | Nextflow Training Week
📆 Paris | Nov 18 | Nextflow Training and Sessions
More info below🧵
November 3, 2025 at 4:31 PM
Are you ready for #Nextflovember!🤩 Join our upcoming Nextflow training sessions with @seqera.io:
📆 Durham, NC | Nov 13 | Nextflow Training and Sessions
📆 Online | Nov 17-21 | Nextflow Training Week
📆 Paris | Nov 18 | Nextflow Training and Sessions
More info below🧵
📆 Durham, NC | Nov 13 | Nextflow Training and Sessions
📆 Online | Nov 17-21 | Nextflow Training Week
📆 Paris | Nov 18 | Nextflow Training and Sessions
More info below🧵