✨ Early holiday vibes from the microscope! ✨
Live calcium imaging of glioblastoma cells at full confluence — bursting with spontaneous activity and glowing with waves of intracellular signaling. You can even spot a few cells dividing amidst the flicker.
#CalciumImaging #Glioblastoma
Live calcium imaging of glioblastoma cells at full confluence — bursting with spontaneous activity and glowing with waves of intracellular signaling. You can even spot a few cells dividing amidst the flicker.
#CalciumImaging #Glioblastoma
November 10, 2025 at 5:13 PM
✨ Early holiday vibes from the microscope! ✨
Live calcium imaging of glioblastoma cells at full confluence — bursting with spontaneous activity and glowing with waves of intracellular signaling. You can even spot a few cells dividing amidst the flicker.
#CalciumImaging #Glioblastoma
Live calcium imaging of glioblastoma cells at full confluence — bursting with spontaneous activity and glowing with waves of intracellular signaling. You can even spot a few cells dividing amidst the flicker.
#CalciumImaging #Glioblastoma
Small update on #TIFFAlign: Now supports interpolation of #2P #optogenetics blocked frames.
github.com/Bozhi-Wu/TIF...
#calciumimaging #calcium #twophoton #onephoton #miniscope
github.com/Bozhi-Wu/TIF...
#calciumimaging #calcium #twophoton #onephoton #miniscope
November 2, 2025 at 7:37 PM
Small update on #TIFFAlign: Now supports interpolation of #2P #optogenetics blocked frames.
github.com/Bozhi-Wu/TIF...
#calciumimaging #calcium #twophoton #onephoton #miniscope
github.com/Bozhi-Wu/TIF...
#calciumimaging #calcium #twophoton #onephoton #miniscope
This spooky season, bring your miniscopes back to life! 🧟♂️⚡
Grab a new PCB here bit.ly/MiniscopePCB and replace the electronics on an existing miniscope body by following this ritual bit.ly/assembly-guide 🔮
#OpenEphys #Miniscope #CalciumImaging
Grab a new PCB here bit.ly/MiniscopePCB and replace the electronics on an existing miniscope body by following this ritual bit.ly/assembly-guide 🔮
#OpenEphys #Miniscope #CalciumImaging
October 31, 2025 at 1:07 PM
This spooky season, bring your miniscopes back to life! 🧟♂️⚡
Grab a new PCB here bit.ly/MiniscopePCB and replace the electronics on an existing miniscope body by following this ritual bit.ly/assembly-guide 🔮
#OpenEphys #Miniscope #CalciumImaging
Grab a new PCB here bit.ly/MiniscopePCB and replace the electronics on an existing miniscope body by following this ritual bit.ly/assembly-guide 🔮
#OpenEphys #Miniscope #CalciumImaging
We’re thrilled to launch the MPI Brain's @mpibrain.bsky.social new Cellfies series!
Neurons in the larval zebrafish brain react to motion left (purple) or right (green). Explore our Algorithms and Circuits research 🔗 brain.mpg.de/schuhknecht
#Cellfie #CalciumImaging #SystemsNeuroscience
Neurons in the larval zebrafish brain react to motion left (purple) or right (green). Explore our Algorithms and Circuits research 🔗 brain.mpg.de/schuhknecht
#Cellfie #CalciumImaging #SystemsNeuroscience
October 17, 2025 at 11:09 AM
We’re thrilled to launch the MPI Brain's @mpibrain.bsky.social new Cellfies series!
Neurons in the larval zebrafish brain react to motion left (purple) or right (green). Explore our Algorithms and Circuits research 🔗 brain.mpg.de/schuhknecht
#Cellfie #CalciumImaging #SystemsNeuroscience
Neurons in the larval zebrafish brain react to motion left (purple) or right (green). Explore our Algorithms and Circuits research 🔗 brain.mpg.de/schuhknecht
#Cellfie #CalciumImaging #SystemsNeuroscience
Likewise, they inhibited global Ca²⁺ activity and pacemaker-like cells fell silent.
#PacemakerCell #calciumimaging #translationalresearch #periodicity
#PacemakerCell #calciumimaging #translationalresearch #periodicity
October 9, 2025 at 8:52 PM
Likewise, they inhibited global Ca²⁺ activity and pacemaker-like cells fell silent.
#PacemakerCell #calciumimaging #translationalresearch #periodicity
#PacemakerCell #calciumimaging #translationalresearch #periodicity
Likewise, they inhibitied global Ca²⁺ activity and pacemaker-like cells fell silent. #PacemakerCell #calciumimaging #periodicity
October 9, 2025 at 8:31 PM
Likewise, they inhibitied global Ca²⁺ activity and pacemaker-like cells fell silent. #PacemakerCell #calciumimaging #periodicity
A supervised variational autoencoder encodes raw calcium‑imaging fluorescence traces into neuron vectors, reducing batch effects and outperforming spike‑inference pipelines. Read more: https://getnews.me/deep-generative-models-decode-single-neuron-calcium-imaging-data/ #calciumimaging #neuroscience
October 3, 2025 at 1:20 PM
A supervised variational autoencoder encodes raw calcium‑imaging fluorescence traces into neuron vectors, reducing batch effects and outperforming spike‑inference pipelines. Read more: https://getnews.me/deep-generative-models-decode-single-neuron-calcium-imaging-data/ #calciumimaging #neuroscience
Wrote a little GUI for automatic and manual alignment across multiple calcium imaging sessions. Supports either tiff or sbx formats. github.com/Bozhi-Wu/TIF...
#2P #neuroscience #calciumimaging #miniscope #imaging #twophoton #github #tiff #scanbox #neurolabware
#2P #neuroscience #calciumimaging #miniscope #imaging #twophoton #github #tiff #scanbox #neurolabware
September 16, 2025 at 1:41 AM
Wrote a little GUI for automatic and manual alignment across multiple calcium imaging sessions. Supports either tiff or sbx formats. github.com/Bozhi-Wu/TIF...
#2P #neuroscience #calciumimaging #miniscope #imaging #twophoton #github #tiff #scanbox #neurolabware
#2P #neuroscience #calciumimaging #miniscope #imaging #twophoton #github #tiff #scanbox #neurolabware
New #TeachingMaterial: Functional #Imaging #DataAnalysis – From #CalciumImaging to #NetworkDynamics. Covers the workflow from raw #calcium data to #SpikeInference & #PopulationAnalysis. For students & self-study; #opensource. Feel free to use & share ✌️
🌍 www.fabriziomusacchio.com/blog/2025-07...
🌍 www.fabriziomusacchio.com/blog/2025-07...
New teaching material: Functional imaging data analysis – From Calcium imaging to network dynamics
We have just completed our new course, Functional Imaging Data Analysis: From Calcium Imaging to Network Dynamics, for the first time as part of the Master of Neuroscience program. This course is now...
www.fabriziomusacchio.com
July 14, 2025 at 4:35 AM
New #TeachingMaterial: Functional #Imaging #DataAnalysis – From #CalciumImaging to #NetworkDynamics. Covers the workflow from raw #calcium data to #SpikeInference & #PopulationAnalysis. For students & self-study; #opensource. Feel free to use & share ✌️
🌍 www.fabriziomusacchio.com/blog/2025-07...
🌍 www.fabriziomusacchio.com/blog/2025-07...
📢 Our new study is now published in Communications Biology:
We demonstrate deep in vivo #ThreePhoton imaging 🔬 of neurons 🧠 and glia in the medial prefrontal cortex with subcellular resolution!
👉 www.nature.com/articles/s42...
#Neuroscience #CalciumImaging #Microglia #DZNE @dzne.science
We demonstrate deep in vivo #ThreePhoton imaging 🔬 of neurons 🧠 and glia in the medial prefrontal cortex with subcellular resolution!
👉 www.nature.com/articles/s42...
#Neuroscience #CalciumImaging #Microglia #DZNE @dzne.science
Three-photon in vivo imaging of neurons and glia in the medial prefrontal cortex with sub-cellular resolution | Communications Biology
Three-photon in vivo imaging provides access to medial prefrontal cortex, hippocampus and spinal cord in mice at up to 1.7 mm depth of neurons, dendrites, spines, astrocytes and microglia.
www.nature.com
June 1, 2025 at 5:11 PM
📢 Our new study is now published in Communications Biology:
We demonstrate deep in vivo #ThreePhoton imaging 🔬 of neurons 🧠 and glia in the medial prefrontal cortex with subcellular resolution!
👉 www.nature.com/articles/s42...
#Neuroscience #CalciumImaging #Microglia #DZNE @dzne.science
We demonstrate deep in vivo #ThreePhoton imaging 🔬 of neurons 🧠 and glia in the medial prefrontal cortex with subcellular resolution!
👉 www.nature.com/articles/s42...
#Neuroscience #CalciumImaging #Microglia #DZNE @dzne.science
Ever wonder how your #brain processes what you see? 🧠
The MICrONS project, captured the activity of 75,000 #neurons in mouse visual #cortex using #CalciumImaging. Early studies are already using this data to identify cell types, learn how genes influence brain wiring, and more.
hubs.ly/Q03lWpjb0
The MICrONS project, captured the activity of 75,000 #neurons in mouse visual #cortex using #CalciumImaging. Early studies are already using this data to identify cell types, learn how genes influence brain wiring, and more.
hubs.ly/Q03lWpjb0
May 30, 2025 at 7:19 PM
Ever wonder how your #brain processes what you see? 🧠
The MICrONS project, captured the activity of 75,000 #neurons in mouse visual #cortex using #CalciumImaging. Early studies are already using this data to identify cell types, learn how genes influence brain wiring, and more.
hubs.ly/Q03lWpjb0
The MICrONS project, captured the activity of 75,000 #neurons in mouse visual #cortex using #CalciumImaging. Early studies are already using this data to identify cell types, learn how genes influence brain wiring, and more.
hubs.ly/Q03lWpjb0
Congrats to the Westlake University team! 🎉
FRCaMPi & SomaFRCaMPi outperform jRGECO1a and enable high-res in vivo imaging in zebrafish and mice.
Watch the highlights 👉 www.ebraincase.com/support/lite...
#CalciumImaging #Neuroscience #TwoPhotonImaging #Zebrafish #MouseModel #FRCaMPi #SomaFRCaMPi
FRCaMPi & SomaFRCaMPi outperform jRGECO1a and enable high-res in vivo imaging in zebrafish and mice.
Watch the highlights 👉 www.ebraincase.com/support/lite...
#CalciumImaging #Neuroscience #TwoPhotonImaging #Zebrafish #MouseModel #FRCaMPi #SomaFRCaMPi
May 19, 2025 at 6:17 AM
Congrats to the Westlake University team! 🎉
FRCaMPi & SomaFRCaMPi outperform jRGECO1a and enable high-res in vivo imaging in zebrafish and mice.
Watch the highlights 👉 www.ebraincase.com/support/lite...
#CalciumImaging #Neuroscience #TwoPhotonImaging #Zebrafish #MouseModel #FRCaMPi #SomaFRCaMPi
FRCaMPi & SomaFRCaMPi outperform jRGECO1a and enable high-res in vivo imaging in zebrafish and mice.
Watch the highlights 👉 www.ebraincase.com/support/lite...
#CalciumImaging #Neuroscience #TwoPhotonImaging #Zebrafish #MouseModel #FRCaMPi #SomaFRCaMPi
🎉 Breakthrough! Congrats to the #WestlakeUniversity team on developing SomaFRCaMPI—a red calcium probe rivaling GCaMP in sensitivity for in vivo neuronal imaging. A leap for brain science!
🔗 www.ebraincase.com/support/lite...
#Neuroscience
#BrainImaging
#CalciumImaging
#SomaFRCaMPI
#Neurotech
🔗 www.ebraincase.com/support/lite...
#Neuroscience
#BrainImaging
#CalciumImaging
#SomaFRCaMPI
#Neurotech
May 6, 2025 at 1:33 AM
🎉 Breakthrough! Congrats to the #WestlakeUniversity team on developing SomaFRCaMPI—a red calcium probe rivaling GCaMP in sensitivity for in vivo neuronal imaging. A leap for brain science!
🔗 www.ebraincase.com/support/lite...
#Neuroscience
#BrainImaging
#CalciumImaging
#SomaFRCaMPI
#Neurotech
🔗 www.ebraincase.com/support/lite...
#Neuroscience
#BrainImaging
#CalciumImaging
#SomaFRCaMPI
#Neurotech
Tracking Ca2+ responses in pancreas just got better! Our latest preprint by Charles Lazimi and Austin Stis showcases CaMPARI 🍸 as a fixable functional marker in living pancreas slices. @cherie-stabler.bsky.social @linnemannlab.bsky.social
www.biorxiv.org/content/10.1...
#CalciumImaging #Diabetes
www.biorxiv.org/content/10.1...
#CalciumImaging #Diabetes
March 26, 2025 at 11:54 PM
Tracking Ca2+ responses in pancreas just got better! Our latest preprint by Charles Lazimi and Austin Stis showcases CaMPARI 🍸 as a fixable functional marker in living pancreas slices. @cherie-stabler.bsky.social @linnemannlab.bsky.social
www.biorxiv.org/content/10.1...
#CalciumImaging #Diabetes
www.biorxiv.org/content/10.1...
#CalciumImaging #Diabetes
Comparative study between D. melanogaster and the invasive D. suzukii. Significant differences in structure and function of the antennal lobes could be the basis for their different host-seeking behaviour causing huge crop damage: www.mdpi.com/2075-4450/16...
#CalciumImaging #Olfaction #Drosophila
#CalciumImaging #Olfaction #Drosophila
January 17, 2025 at 3:37 PM
Comparative study between D. melanogaster and the invasive D. suzukii. Significant differences in structure and function of the antennal lobes could be the basis for their different host-seeking behaviour causing huge crop damage: www.mdpi.com/2075-4450/16...
#CalciumImaging #Olfaction #Drosophila
#CalciumImaging #Olfaction #Drosophila
Hi all! I’m developing a fiber endoscope that uses a 100-micron fiber to perform fluorescence imaging deep in tissues. I’m especially keen to connect with neuroscientists and anyone passionate about fluorescence imaging. Let’s share ideas and collaborate! #firstskeet #neuroscience #calciumimaging
December 3, 2024 at 9:36 AM
Hi all! I’m developing a fiber endoscope that uses a 100-micron fiber to perform fluorescence imaging deep in tissues. I’m especially keen to connect with neuroscientists and anyone passionate about fluorescence imaging. Let’s share ideas and collaborate! #firstskeet #neuroscience #calciumimaging
🎥🔬 #CalciumImaging data analysis using #Python?! 🐍📊
This article is a great start #periodograms #PCA #ICA #GraphTheory
👉 Full details + code: focalplane.biologists.com/2023/10/27/a...
#Neuroscience #Python #DataAnalysis
This article is a great start #periodograms #PCA #ICA #GraphTheory
👉 Full details + code: focalplane.biologists.com/2023/10/27/a...
#Neuroscience #Python #DataAnalysis
Analyzing calcium imaging data using Python - FocalPlane
Analyzing calcium imaging data using Python - How to
focalplane.biologists.com
December 2, 2024 at 8:25 PM
🎥🔬 #CalciumImaging data analysis using #Python?! 🐍📊
This article is a great start #periodograms #PCA #ICA #GraphTheory
👉 Full details + code: focalplane.biologists.com/2023/10/27/a...
#Neuroscience #Python #DataAnalysis
This article is a great start #periodograms #PCA #ICA #GraphTheory
👉 Full details + code: focalplane.biologists.com/2023/10/27/a...
#Neuroscience #Python #DataAnalysis
If you are interested in #calciumimaging of #brainmetastases and cancer networks, come see my poster at #SNO2024 (CSIG-11) and listen to @nielsolshausen.bsky.social plenary talk tomorrow at 2:10pm! Happy to connect
November 22, 2024 at 8:12 PM
If you are interested in #calciumimaging of #brainmetastases and cancer networks, come see my poster at #SNO2024 (CSIG-11) and listen to @nielsolshausen.bsky.social plenary talk tomorrow at 2:10pm! Happy to connect
Congratulations to @anitaent17 for her awesome work and excellent poster at Gastronauts @Gutbrainmatters!!! @UniMelbMDHS #circadian #ens #calciumimaging
x.com/Gutbrainmatter…
x.com/Gutbrainmatter…
February 10, 2025 at 10:03 PM
Congratulations to @anitaent17 for her awesome work and excellent poster at Gastronauts @Gutbrainmatters!!! @UniMelbMDHS #circadian #ens #calciumimaging
x.com/Gutbrainmatter…
x.com/Gutbrainmatter…
#NeuroPSIPublications: Recent paper from Brice Bathellier's group in
@eLife: Context-dependent signaling of coincident auditory and visual events in primary visual cortex.#visualcortex #calciumimaging #auditorycortex
doi.org/10.7554/eLife.…
@eLife: Context-dependent signaling of coincident auditory and visual events in primary visual cortex.#visualcortex #calciumimaging #auditorycortex
doi.org/10.7554/eLife.…
Context-dependent signaling of coincident auditory and visual events in primary visual cortex
Abrupt sounds boost coincident visual cortex responses which could help localization of sudden audio-visual events.
doi.org
January 18, 2025 at 5:02 PM
#NeuroPSIPublications: Recent paper from Brice Bathellier's group in
@eLife: Context-dependent signaling of coincident auditory and visual events in primary visual cortex.#visualcortex #calciumimaging #auditorycortex
doi.org/10.7554/eLife.…
@eLife: Context-dependent signaling of coincident auditory and visual events in primary visual cortex.#visualcortex #calciumimaging #auditorycortex
doi.org/10.7554/eLife.…
#Postdoc position w/ @TSpiresJones @UKDRI #neuroscience #apoE in AD #synapse #synapticfunction #calciumimaging
x.com/TSpiresJones/s…
x.com/TSpiresJones/s…
January 20, 2025 at 7:11 PM
#Postdoc position w/ @TSpiresJones @UKDRI #neuroscience #apoE in AD #synapse #synapticfunction #calciumimaging
x.com/TSpiresJones/s…
x.com/TSpiresJones/s…
December 25, 2024 at 7:21 AM