The current landscape and emerging challenges of benchmarking single-cell methods. #SingleCell #SequencingData #Bioinformatics #Genomics #Benchmarking #BriefingsInBioinformatics 🧪🧬 🖥️
academic.oup.com/bib/article/...

Targeted decontamination of #SequencingData with the #CLEANtool enhances viral #genome analysis accuracy #VirusBioinformatics #BioinformaticsTools #DataQualityControl 🧬🔬
📄https://doi.org/10.1093/nargab/lqaf105
👤EVBC: Marie Lataretu, Sebastian Krautwurst, Mike Marquet, Adrian Viehweger, Martin Hölzer

Direct Inference of Haplotypes from Sequencing Data. #Haplotypes #SequencingData #Bioinformatics #Genomics
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Targeted decontamination of sequencing data with CLEAN. #SequencingData #DataDecontamination #NARgenomicsAndBioinformatics #Bioinformatics #Genomics 🧬 🖥️
academic.oup.com/nargab/artic...

Evaluation of sequencing reads at scale using rdeval. #SequencingData #ReadsSummary #Bioinformatics 🧬 🖥️
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JARVIS3: an efficient encoder for genomic data. #SequencingData #Fasta #Fastq #ReferenceFreeCompression #LosslessCompression #GenomicsData #Bioinformatics 🧬 🖥️
Github: github.com/cobilab/jarv...

academic.oup.com/bioinformati...

Pod5Viewer: a GUI for inspecting raw nanopore sequencing data. #Nanopore #SequencingData #Bioinformatics #Genomics @nanoporetech.com 🧬 🖥️
academic.oup.com/bioinformati...