10/ And yes– I am officially fluent in rebuttals 🥋 It even helped me win Best Talk at ISMB/ECCB 2025 NetBio– for the science, the presentation, and (yes) the Q&A. #ISMBECCB2025
September 2, 2025 at 6:37 PM
10/ And yes– I am officially fluent in rebuttals 🥋 It even helped me win Best Talk at ISMB/ECCB 2025 NetBio– for the science, the presentation, and (yes) the Q&A. #ISMBECCB2025
🙏 A big thank you to @mkutmon.bsky.social and the #NetBio organizers for trusting me with this project. I had a great time designing it and learned so much in the process!
August 12, 2025 at 9:28 PM
🙏 A big thank you to @mkutmon.bsky.social and the #NetBio organizers for trusting me with this project. I had a great time designing it and learned so much in the process!
🔗 As described on their website:
“The Network Biology Community of Special Interest (NetBio COSI) serves to introduce novel methods and tools, identify best practices, and highlight the latest research in the growing and interconnected field of network biology.”
“The Network Biology Community of Special Interest (NetBio COSI) serves to introduce novel methods and tools, identify best practices, and highlight the latest research in the growing and interconnected field of network biology.”
August 12, 2025 at 9:28 PM
🔗 As described on their website:
“The Network Biology Community of Special Interest (NetBio COSI) serves to introduce novel methods and tools, identify best practices, and highlight the latest research in the growing and interconnected field of network biology.”
“The Network Biology Community of Special Interest (NetBio COSI) serves to introduce novel methods and tools, identify best practices, and highlight the latest research in the growing and interconnected field of network biology.”
Great to see #BITS members at #ISMBECCB2025, the Conference of the International Society of Computational Biology in Liverpool!
Congrats to Giulia Cesaro, Mirko Treccani, Leonardo Morelli & Laura Veschetti for presenting at the NetBio, Transmed, HitSeq & iRNA sessions!
Congrats to Giulia Cesaro, Mirko Treccani, Leonardo Morelli & Laura Veschetti for presenting at the NetBio, Transmed, HitSeq & iRNA sessions!
July 25, 2025 at 2:54 PM
Great to see #BITS members at #ISMBECCB2025, the Conference of the International Society of Computational Biology in Liverpool!
Congrats to Giulia Cesaro, Mirko Treccani, Leonardo Morelli & Laura Veschetti for presenting at the NetBio, Transmed, HitSeq & iRNA sessions!
Congrats to Giulia Cesaro, Mirko Treccani, Leonardo Morelli & Laura Veschetti for presenting at the NetBio, Transmed, HitSeq & iRNA sessions!
✈️💻🧬 Heading home after an inspiring #ISMBECCB2025! Grateful for the amazing talks, great discussions, and fun activities. So nice reconnecting with old friends and meeting new ones 🥰
I'm proud of the #NetBio COSI team I get to work with - you're awesome!
@netbio.bsky.social @iscbio.bsky.social
I'm proud of the #NetBio COSI team I get to work with - you're awesome!
@netbio.bsky.social @iscbio.bsky.social
July 25, 2025 at 5:30 AM
✈️💻🧬 Heading home after an inspiring #ISMBECCB2025! Grateful for the amazing talks, great discussions, and fun activities. So nice reconnecting with old friends and meeting new ones 🥰
I'm proud of the #NetBio COSI team I get to work with - you're awesome!
@netbio.bsky.social @iscbio.bsky.social
I'm proud of the #NetBio COSI team I get to work with - you're awesome!
@netbio.bsky.social @iscbio.bsky.social
🎉🏆 Our third featured winner from the #NetBio #Cytoscape Visualization Contest submitted by Michael Costanzo.
This beautiful visualization maps genetic interaction profile similarities among 3,784 human genes in HAP1 cells and their role in biological processes.
doi.org/10.1101/2025...
This beautiful visualization maps genetic interaction profile similarities among 3,784 human genes in HAP1 cells and their role in biological processes.
doi.org/10.1101/2025...
July 24, 2025 at 3:30 PM
🎉🏆 Our third featured winner from the #NetBio #Cytoscape Visualization Contest submitted by Michael Costanzo.
This beautiful visualization maps genetic interaction profile similarities among 3,784 human genes in HAP1 cells and their role in biological processes.
doi.org/10.1101/2025...
This beautiful visualization maps genetic interaction profile similarities among 3,784 human genes in HAP1 cells and their role in biological processes.
doi.org/10.1101/2025...
Another beautiful winning #Cytoscape #NetBio visualization by Jong Lim with a special and poetic description!
"...Formed in a circular format to resemble a human eye with tears, the network represents the genetic uphill battle some face from the moment they are born."
woobox.com/b9poce/galle...
"...Formed in a circular format to resemble a human eye with tears, the network represents the genetic uphill battle some face from the moment they are born."
woobox.com/b9poce/galle...
July 24, 2025 at 3:21 PM
Another beautiful winning #Cytoscape #NetBio visualization by Jong Lim with a special and poetic description!
"...Formed in a circular format to resemble a human eye with tears, the network represents the genetic uphill battle some face from the moment they are born."
woobox.com/b9poce/galle...
"...Formed in a circular format to resemble a human eye with tears, the network represents the genetic uphill battle some face from the moment they are born."
woobox.com/b9poce/galle...
Thank you, @cantinilab.bsky.social for the fantastic keynote and for sharing your insights with the #NetBio community at #ISMBECCB2025! It was a real pleasure having you with us.
Safe travels back to Paris! 🌍✈️
Safe travels back to Paris! 🌍✈️
July 24, 2025 at 10:06 AM
Thank you, @cantinilab.bsky.social for the fantastic keynote and for sharing your insights with the #NetBio community at #ISMBECCB2025! It was a real pleasure having you with us.
Safe travels back to Paris! 🌍✈️
Safe travels back to Paris! 🌍✈️
Going back to Paris after four days of awesome science! Really happy to have contributed to #ISMBECCB2025 with a keynote talk in the @netbio.bsky.social.
Thanks again @anaisbaudot.bsky.social and all #NetBio commitee for the invitation!
@institutpasteur.bsky.social #singlecell #AI #netbio
Thanks again @anaisbaudot.bsky.social and all #NetBio commitee for the invitation!
@institutpasteur.bsky.social #singlecell #AI #netbio
🚨 Excited to announce our first keynote for #NetBio 2025: Laura Cantini (@cantinilab.bsky.social)!
She is sharing cutting-edge work on multi-modal learning for single-cell data integration, tackling how to combine diverse omics and spatial data to unlock new insights into cellular heterogeneity.
She is sharing cutting-edge work on multi-modal learning for single-cell data integration, tackling how to combine diverse omics and spatial data to unlock new insights into cellular heterogeneity.
July 24, 2025 at 8:47 AM
Going back to Paris after four days of awesome science! Really happy to have contributed to #ISMBECCB2025 with a keynote talk in the @netbio.bsky.social.
Thanks again @anaisbaudot.bsky.social and all #NetBio commitee for the invitation!
@institutpasteur.bsky.social #singlecell #AI #netbio
Thanks again @anaisbaudot.bsky.social and all #NetBio commitee for the invitation!
@institutpasteur.bsky.social #singlecell #AI #netbio
It was an immense pleasure making the new #NetBio logo! Thank you for the trust @netbio.bsky.social :D
#colouryourresearch
#colouryourresearch
Our #NetBio track will continue in a few minutes in room 1B with another set of great talks!
Have you already seen our new logo ✨👏? Thanks @romanayanez.bsky.social for the beautiful design 🥰!
Have you already seen our new logo ✨👏? Thanks @romanayanez.bsky.social for the beautiful design 🥰!
July 24, 2025 at 7:09 AM
It was an immense pleasure making the new #NetBio logo! Thank you for the trust @netbio.bsky.social :D
#colouryourresearch
#colouryourresearch
✨ Awesome network visualizations created by one of the winners of the #NetBio #Cytoscape visualization contest:
Alejandra Paulina Perez Gonzalez
#ISMBECCB2025
Alejandra Paulina Perez Gonzalez
#ISMBECCB2025
July 23, 2025 at 6:13 PM
✨ Awesome network visualizations created by one of the winners of the #NetBio #Cytoscape visualization contest:
Alejandra Paulina Perez Gonzalez
#ISMBECCB2025
Alejandra Paulina Perez Gonzalez
#ISMBECCB2025
👋 We wrap up our #NetBio track 2025 with announcing the #Cytoscape network visualization competition winners (woobox.com/b9poce)
Congrats:
1: Alejandra Paulina Perez Gonzalez
2. Michael Costanzo
3. Jong Chan Lim
👏👏👏 Exciting to have Alejandra and Jong in the audience and congrats to Michael!
Congrats:
1: Alejandra Paulina Perez Gonzalez
2. Michael Costanzo
3. Jong Chan Lim
👏👏👏 Exciting to have Alejandra and Jong in the audience and congrats to Michael!
NetBio Cytoscape Visualization Competition
woobox.com
July 23, 2025 at 1:33 PM
👋 We wrap up our #NetBio track 2025 with announcing the #Cytoscape network visualization competition winners (woobox.com/b9poce)
Congrats:
1: Alejandra Paulina Perez Gonzalez
2. Michael Costanzo
3. Jong Chan Lim
👏👏👏 Exciting to have Alejandra and Jong in the audience and congrats to Michael!
Congrats:
1: Alejandra Paulina Perez Gonzalez
2. Michael Costanzo
3. Jong Chan Lim
👏👏👏 Exciting to have Alejandra and Jong in the audience and congrats to Michael!
✨ And it's already time for the last selected #NetBio talk! Piotr Sliwa is presenting "Multilayer Networks Identify Clinically Relevant Patient Endotypes in COVID-19 and Sepsis"
#ISMBECCB2025 #NetworkBiology
#ISMBECCB2025 #NetworkBiology
July 23, 2025 at 1:10 PM
✨ And it's already time for the last selected #NetBio talk! Piotr Sliwa is presenting "Multilayer Networks Identify Clinically Relevant Patient Endotypes in COVID-19 and Sepsis"
#ISMBECCB2025 #NetworkBiology
#ISMBECCB2025 #NetworkBiology
📣Last speaker of the #NetBio morning session:
Samuele Firmani is presenting GATE (Graph Antiviral Target Explorer) to predict disease genes in viral infections with Message Passing Neural Networks"
#ISMBECCB2025 #NetworkBiology
Samuele Firmani is presenting GATE (Graph Antiviral Target Explorer) to predict disease genes in viral infections with Message Passing Neural Networks"
#ISMBECCB2025 #NetworkBiology
July 23, 2025 at 11:51 AM
📣Last speaker of the #NetBio morning session:
Samuele Firmani is presenting GATE (Graph Antiviral Target Explorer) to predict disease genes in viral infections with Message Passing Neural Networks"
#ISMBECCB2025 #NetworkBiology
Samuele Firmani is presenting GATE (Graph Antiviral Target Explorer) to predict disease genes in viral infections with Message Passing Neural Networks"
#ISMBECCB2025 #NetworkBiology
✨Johannes Kersting just presented his cool #Nextflow Pipeline for Network-Based Disease Module Identification and Drug Repurposing
nf-co.re/diseasemodul...
github.com/nf-core/dise...
#ISMBECCB2025 #NetworkBiology #NetBio
nf-co.re/diseasemodul...
github.com/nf-core/dise...
#ISMBECCB2025 #NetworkBiology #NetBio
July 23, 2025 at 11:38 AM
✨Johannes Kersting just presented his cool #Nextflow Pipeline for Network-Based Disease Module Identification and Drug Repurposing
nf-co.re/diseasemodul...
github.com/nf-core/dise...
#ISMBECCB2025 #NetworkBiology #NetBio
nf-co.re/diseasemodul...
github.com/nf-core/dise...
#ISMBECCB2025 #NetworkBiology #NetBio
🎤 Next up is Terence Egbelo
He is sharing his research on "Improving Target-Adverse Event Association Prediction by Mitigating Topological Imbalance in Knowledge Graphs" with the #NetBio audience! ✨
#ISMBECCB2025 #NetworkBiology #KnowledgeGraphs
He is sharing his research on "Improving Target-Adverse Event Association Prediction by Mitigating Topological Imbalance in Knowledge Graphs" with the #NetBio audience! ✨
#ISMBECCB2025 #NetworkBiology #KnowledgeGraphs
July 23, 2025 at 11:06 AM
🎤 Next up is Terence Egbelo
He is sharing his research on "Improving Target-Adverse Event Association Prediction by Mitigating Topological Imbalance in Knowledge Graphs" with the #NetBio audience! ✨
#ISMBECCB2025 #NetworkBiology #KnowledgeGraphs
He is sharing his research on "Improving Target-Adverse Event Association Prediction by Mitigating Topological Imbalance in Knowledge Graphs" with the #NetBio audience! ✨
#ISMBECCB2025 #NetworkBiology #KnowledgeGraphs
🔊 Nicoleta Siminea just presented her work on "Interactome-based computational solutions to support personalized drug therapy decisions in glioblastoma" at the #NetBio track at #ISMBECCB2025!
July 23, 2025 at 11:01 AM
🔊 Nicoleta Siminea just presented her work on "Interactome-based computational solutions to support personalized drug therapy decisions in glioblastoma" at the #NetBio track at #ISMBECCB2025!
#NetBio talks are continuing in room 1B:
Dongmin Bang is presenting his proceeding paper on "MixingDTA: Improved Drug-Target Affinity Prediction by Extending Mixup with Guilt-By-Association"
doi.org/10.1093/bioi...
#ISMBECCB2025 #NetworkBiology
Dongmin Bang is presenting his proceeding paper on "MixingDTA: Improved Drug-Target Affinity Prediction by Extending Mixup with Guilt-By-Association"
doi.org/10.1093/bioi...
#ISMBECCB2025 #NetworkBiology
July 23, 2025 at 10:33 AM
#NetBio talks are continuing in room 1B:
Dongmin Bang is presenting his proceeding paper on "MixingDTA: Improved Drug-Target Affinity Prediction by Extending Mixup with Guilt-By-Association"
doi.org/10.1093/bioi...
#ISMBECCB2025 #NetworkBiology
Dongmin Bang is presenting his proceeding paper on "MixingDTA: Improved Drug-Target Affinity Prediction by Extending Mixup with Guilt-By-Association"
doi.org/10.1093/bioi...
#ISMBECCB2025 #NetworkBiology
✨After a very well-attended first poster session with lots of discussions, we are now starting with the second day of #NetBio at #ISMBECCB2025!
Make sure you visit our #NetworkBiology posters in the next two days! Lots of:
- tools/resources
- methods/algorithms
- biomedical applications/use cases
Make sure you visit our #NetworkBiology posters in the next two days! Lots of:
- tools/resources
- methods/algorithms
- biomedical applications/use cases
July 23, 2025 at 10:30 AM
✨After a very well-attended first poster session with lots of discussions, we are now starting with the second day of #NetBio at #ISMBECCB2025!
Make sure you visit our #NetworkBiology posters in the next two days! Lots of:
- tools/resources
- methods/algorithms
- biomedical applications/use cases
Make sure you visit our #NetworkBiology posters in the next two days! Lots of:
- tools/resources
- methods/algorithms
- biomedical applications/use cases
⌛It's already time for our last #NetBio speaker of today:
✨🔊We are excited to welcome our 2nd keynote speaker Jan Baumbach talking about "Quantum computing for network medicine-based epistatic disease mechanism mining - Fake it till you make it?" ✨
#ISMBECCB2025 #NetworkBiology
✨🔊We are excited to welcome our 2nd keynote speaker Jan Baumbach talking about "Quantum computing for network medicine-based epistatic disease mechanism mining - Fake it till you make it?" ✨
#ISMBECCB2025 #NetworkBiology
July 22, 2025 at 4:29 PM
⌛It's already time for our last #NetBio speaker of today:
✨🔊We are excited to welcome our 2nd keynote speaker Jan Baumbach talking about "Quantum computing for network medicine-based epistatic disease mechanism mining - Fake it till you make it?" ✨
#ISMBECCB2025 #NetworkBiology
✨🔊We are excited to welcome our 2nd keynote speaker Jan Baumbach talking about "Quantum computing for network medicine-based epistatic disease mechanism mining - Fake it till you make it?" ✨
#ISMBECCB2025 #NetworkBiology
🎤 Next talk at #NetBio is by Aritra Bose from IBM Research presenting their work on "Quantum Random Walks for Biomarker Discovery in Biomolecular Networks".
#ISMBECCB2025 #NetworkBiology
#ISMBECCB2025 #NetworkBiology
July 22, 2025 at 4:05 PM
🎤 Next talk at #NetBio is by Aritra Bose from IBM Research presenting their work on "Quantum Random Walks for Biomarker Discovery in Biomolecular Networks".
#ISMBECCB2025 #NetworkBiology
#ISMBECCB2025 #NetworkBiology
After lots of #NetBio discussions over coffee, we are now starting the last session for today:
Lucas Gillenwater is presenting his #ISMBECCB2025 proceeding paper "GRACKLE: An interpretable matrix factorization approach for biomedical representation learning".
doi.org/10.1093/bioi...
#NetworkBiology
Lucas Gillenwater is presenting his #ISMBECCB2025 proceeding paper "GRACKLE: An interpretable matrix factorization approach for biomedical representation learning".
doi.org/10.1093/bioi...
#NetworkBiology
July 22, 2025 at 3:45 PM
After lots of #NetBio discussions over coffee, we are now starting the last session for today:
Lucas Gillenwater is presenting his #ISMBECCB2025 proceeding paper "GRACKLE: An interpretable matrix factorization approach for biomedical representation learning".
doi.org/10.1093/bioi...
#NetworkBiology
Lucas Gillenwater is presenting his #ISMBECCB2025 proceeding paper "GRACKLE: An interpretable matrix factorization approach for biomedical representation learning".
doi.org/10.1093/bioi...
#NetworkBiology
🎤 Next talk at #NetBio:
@beatrizurda.bsky.social: Disentangling the genetic and non-genetic origin of disease co-occurrences
#ISMBECCB2025 #NetworkBiology
@beatrizurda.bsky.social: Disentangling the genetic and non-genetic origin of disease co-occurrences
#ISMBECCB2025 #NetworkBiology
July 22, 2025 at 2:49 PM
🎤 Next talk at #NetBio:
@beatrizurda.bsky.social: Disentangling the genetic and non-genetic origin of disease co-occurrences
#ISMBECCB2025 #NetworkBiology
@beatrizurda.bsky.social: Disentangling the genetic and non-genetic origin of disease co-occurrences
#ISMBECCB2025 #NetworkBiology