GViNC: an innovative framework for genome graph comparison reveals hidden patterns in the genetic diversity of human populations. #GenomeGraphs #GraphsComparison #NARgenomicsAndBioinformatics
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
September 23, 2025 at 1:49 PM
GViNC: an innovative framework for genome graph comparison reveals hidden patterns in the genetic diversity of human populations. #GenomeGraphs #GraphsComparison #NARgenomicsAndBioinformatics
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
Cell-free DNA as a potential alternative to genomic DNA in genetic studies. #cfDNA #DNAseq #GeneticStudies #NARgenomicsAndBioinformatics
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
September 23, 2025 at 8:31 AM
Cell-free DNA as a potential alternative to genomic DNA in genetic studies. #cfDNA #DNAseq #GeneticStudies #NARgenomicsAndBioinformatics
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
🌟 Discover NARGAB Editor's Choice articles, hand-picked by our Editor-in-Chief for their quality and impact.
👉 All articles are free to read and download, explore the full collection now!
🔗 academic.oup.com/nargab/pages...
#NARGenomicsandBioinformatics #EditorsChoice #OpenAccess
👉 All articles are free to read and download, explore the full collection now!
🔗 academic.oup.com/nargab/pages...
#NARGenomicsandBioinformatics #EditorsChoice #OpenAccess
September 9, 2025 at 1:57 PM
🌟 Discover NARGAB Editor's Choice articles, hand-picked by our Editor-in-Chief for their quality and impact.
👉 All articles are free to read and download, explore the full collection now!
🔗 academic.oup.com/nargab/pages...
#NARGenomicsandBioinformatics #EditorsChoice #OpenAccess
👉 All articles are free to read and download, explore the full collection now!
🔗 academic.oup.com/nargab/pages...
#NARGenomicsandBioinformatics #EditorsChoice #OpenAccess
Explicit Scale Simulation for analysis of RNA-sequencing count data with ALDEx2. #RNAseq #Transcriptomics #Bioinformatics #NARgenomicsAndBioinformatics
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
September 1, 2025 at 9:15 AM
Explicit Scale Simulation for analysis of RNA-sequencing count data with ALDEx2. #RNAseq #Transcriptomics #Bioinformatics #NARgenomicsAndBioinformatics
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
An nf-core framework for the systematic comparison of alternative modeling tools: the multiple sequence alignment case study. #nfCore #ToolsComparison #MSA #NARgenomicsAndBioinformatics #Bioinformatics 🧬 🖥️
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
August 11, 2025 at 8:31 AM
An nf-core framework for the systematic comparison of alternative modeling tools: the multiple sequence alignment case study. #nfCore #ToolsComparison #MSA #NARgenomicsAndBioinformatics #Bioinformatics 🧬 🖥️
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
Targeted decontamination of sequencing data with CLEAN. #SequencingData #DataDecontamination #NARgenomicsAndBioinformatics #Bioinformatics #Genomics 🧬 🖥️
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
August 9, 2025 at 6:43 PM
Targeted decontamination of sequencing data with CLEAN. #SequencingData #DataDecontamination #NARgenomicsAndBioinformatics #Bioinformatics #Genomics 🧬 🖥️
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
Advancing metagenomic classification with NABAS+: a novel alignment-based approach. #Metagenomics #Genomics #Bioinformatics #NARgenomicsAndBioinformatics
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
July 18, 2025 at 6:05 PM
Advancing metagenomic classification with NABAS+: a novel alignment-based approach. #Metagenomics #Genomics #Bioinformatics #NARgenomicsAndBioinformatics
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
Comparison of single-cell long-read and short-read transcriptome sequencing via cDNA molecule matching: quality evaluation of the MAS-ISO-seq approach. #SingleCell #scRNAseq #ShortRead #LongRead #SequencingComparison #NARgenomicsAndBioinformatics
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
July 16, 2025 at 11:15 AM
Comparison of single-cell long-read and short-read transcriptome sequencing via cDNA molecule matching: quality evaluation of the MAS-ISO-seq approach. #SingleCell #scRNAseq #ShortRead #LongRead #SequencingComparison #NARgenomicsAndBioinformatics
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
T2T-CHM13 versus hg38: accurate identification of immunoglobulin isotypes from scRNA-seq requires a genome reference matched for ancestry. #ReferenceGenomes #ImmunoglobulinIsotypes #scRNAseq #NARgenomicsANDBioinformatics #Bionformatics #Genomics 🧬 🖥️
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
June 18, 2025 at 5:05 PM
T2T-CHM13 versus hg38: accurate identification of immunoglobulin isotypes from scRNA-seq requires a genome reference matched for ancestry. #ReferenceGenomes #ImmunoglobulinIsotypes #scRNAseq #NARgenomicsANDBioinformatics #Bionformatics #Genomics 🧬 🖥️
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
Benchmarking of methods that identify alternative polyadenylation events in single-/multiple-polyadenylation site genes. #PolyA #MethodBenchmarking #Genomics #NARgenomicsAndBioinformatics
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
academic.oup.com
June 2, 2025 at 8:31 AM
Benchmarking of methods that identify alternative polyadenylation events in single-/multiple-polyadenylation site genes. #PolyA #MethodBenchmarking #Genomics #NARgenomicsAndBioinformatics
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
scHiGex: predicting single-cell gene expression based on single-cell Hi-C data. #SingleCell #GeneExpression #HiC #NARGenomicsAndBioinformatics #Genomics 🧬 🖥️
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
scHiGex: predicting single-cell gene expression based on single-cell Hi-C data
Abstract. A novel biochemistry experiment named HiRES has been developed to capture both the chromosomal conformations and gene expression levels of indivi
academic.oup.com
February 23, 2025 at 12:10 AM
scHiGex: predicting single-cell gene expression based on single-cell Hi-C data. #SingleCell #GeneExpression #HiC #NARGenomicsAndBioinformatics #Genomics 🧬 🖥️
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
Improved characterization of 3′ single-cell RNA-seq libraries with paired-end avidity sequencing. #SingleCell #scRNAseq #AVITI #Genomics #Sequencing #Bioinformatics @elembio.bsky.social #NARgenomicsAndBioinformatics
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
Improved characterization of 3′ single-cell RNA-seq libraries with paired-end avidity sequencing
Abstract. Prevailing poly(dT)-primed 3′ single-cell RNA-seq protocols generate barcoded cDNA fragments containing the reverse transcriptase priming site or
academic.oup.com
December 22, 2024 at 2:10 PM
Improved characterization of 3′ single-cell RNA-seq libraries with paired-end avidity sequencing. #SingleCell #scRNAseq #AVITI #Genomics #Sequencing #Bioinformatics @elembio.bsky.social #NARgenomicsAndBioinformatics
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
IsopretGO—analysing and visualizing the functional consequences of differential splicing. #DifferentialSplicing #NARgenomicsAndBioinformatics 🧬 🖥️
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
IsopretGO—analysing and visualizing the functional consequences of differential splicing
Abstract. Gene Ontology overrepresentation analysis (GO-ORA) is a standard approach towards characterizing salient functional characteristics of sets of di
academic.oup.com
December 10, 2024 at 10:45 PM
IsopretGO—analysing and visualizing the functional consequences of differential splicing. #DifferentialSplicing #NARgenomicsAndBioinformatics 🧬 🖥️
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
Graphite: painting genomes using a colored de Bruijn graph. #MicrobialGenomes #GenomePainting #NARgenomicsAndBioinformatics
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
Graphite: painting genomes using a colored de Bruijn graph
Abstract. The recent growth of microbial sequence data allows comparisons at unprecedented scales, enabling the tracking of strains, mobile genetic element
academic.oup.com
December 10, 2024 at 10:26 PM
Graphite: painting genomes using a colored de Bruijn graph. #MicrobialGenomes #GenomePainting #NARgenomicsAndBioinformatics
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
bcRflow: a Nextflow pipeline for characterizing B cell receptor repertoires from non-targeted transcriptomic data. #BcellReceptor #Nextflow #Bioinformatics #Genomics #NARgenomicsAndBioinformatics 🧬 🖥️
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...
bcRflow: a Nextflow pipeline for characterizing B cell receptor repertoires from non-targeted transcriptomic data
Abstract. B cells play a critical role in the adaptive recognition of foreign antigens through diverse receptor generation. While targeted immune sequencin
academic.oup.com
December 10, 2024 at 10:22 PM
bcRflow: a Nextflow pipeline for characterizing B cell receptor repertoires from non-targeted transcriptomic data. #BcellReceptor #Nextflow #Bioinformatics #Genomics #NARgenomicsAndBioinformatics 🧬 🖥️
academic.oup.com/nargab/artic...
academic.oup.com/nargab/artic...