Looking forward to it! Now #MorphographX is an important part of my work.
I'm grateful for @kierzkowskilab.bsky.social and @mingyuanzhu.bsky.social teaching me how to use it during grad school, and for @richardsmithlab.bsky.social and @soestrauss.bsky.social always patiently answering questions!
I'm grateful for @kierzkowskilab.bsky.social and @mingyuanzhu.bsky.social teaching me how to use it during grad school, and for @richardsmithlab.bsky.social and @soestrauss.bsky.social always patiently answering questions!
Coming this week! @minyaaa.bsky.social @roederlab.bsky.social @naascarabidopsis.bsky.social 🌱 Join us for our upcoming workshop Quantifying Plant Morphogenesis: 4D Insights with MorphoGraphX!
Learn how to quantitatively analyze plant confocal imaging data using MorphoGraphX.
Learn how to quantitatively analyze plant confocal imaging data using MorphoGraphX.
October 20, 2025 at 6:26 PM
Looking forward to it! Now #MorphographX is an important part of my work.
I'm grateful for @kierzkowskilab.bsky.social and @mingyuanzhu.bsky.social teaching me how to use it during grad school, and for @richardsmithlab.bsky.social and @soestrauss.bsky.social always patiently answering questions!
I'm grateful for @kierzkowskilab.bsky.social and @mingyuanzhu.bsky.social teaching me how to use it during grad school, and for @richardsmithlab.bsky.social and @soestrauss.bsky.social always patiently answering questions!
Excited to participate and talk about how quantitative imaging analyses using #MorphographX helped see things that I didn’t know! #MGX 🌱🧪
🌱 Join us for our upcoming workshop Quantifying Plant Morphogenesis: 4D Insights with MorphoGraphX!
Learn how to quantitatively analyze plant confocal imaging data using MorphoGraphX.
Learn how to quantitatively analyze plant confocal imaging data using MorphoGraphX.
October 6, 2025 at 5:18 PM
Excited to participate and talk about how quantitative imaging analyses using #MorphographX helped see things that I didn’t know! #MGX 🌱🧪
🌱 Join us for our upcoming workshop Quantifying Plant Morphogenesis: 4D Insights with MorphoGraphX!
Learn how to quantitatively analyze plant confocal imaging data using MorphoGraphX.
Learn how to quantitatively analyze plant confocal imaging data using MorphoGraphX.
October 6, 2025 at 2:21 PM
🌱 Join us for our upcoming workshop Quantifying Plant Morphogenesis: 4D Insights with MorphoGraphX!
Learn how to quantitatively analyze plant confocal imaging data using MorphoGraphX.
Learn how to quantitatively analyze plant confocal imaging data using MorphoGraphX.
Happy 500th (Google) citation for the #MorphoGraphX v1.0 paper (in just under 10 years)🥳🎂
www.morphographx.org @RichardSmithLab @RoutierLab @kierzkowskilab.bsky.social doi.org/10.7554/eLif...
www.morphographx.org @RichardSmithLab @RoutierLab @kierzkowskilab.bsky.social doi.org/10.7554/eLif...
February 8, 2025 at 5:22 PM
Happy 500th (Google) citation for the #MorphoGraphX v1.0 paper (in just under 10 years)🥳🎂
www.morphographx.org @RichardSmithLab @RoutierLab @kierzkowskilab.bsky.social doi.org/10.7554/eLif...
www.morphographx.org @RichardSmithLab @RoutierLab @kierzkowskilab.bsky.social doi.org/10.7554/eLif...
January 28, 2025 at 6:38 PM
Submitted and out as preprint: A Plausible Model of Phyllotaxis Patterning from a Single Apical Cell. 🪴🌱 Including 3D cell analysis & modeling #MorphoGraphX #MorphoDynamX #Physcomitrella #Phyllotaxis @roederlab.bsky.social @richardsmithlab.bsky.social dx.doi.org/10.2139/ssrn...
August 5, 2025 at 1:07 PM
Submitted and out as preprint: A Plausible Model of Phyllotaxis Patterning from a Single Apical Cell. 🪴🌱 Including 3D cell analysis & modeling #MorphoGraphX #MorphoDynamX #Physcomitrella #Phyllotaxis @roederlab.bsky.social @richardsmithlab.bsky.social dx.doi.org/10.2139/ssrn...
MorphoGraphX 2.0.2 is now available:
morphographx.org/software/
morphographx.org/software/
April 15, 2025 at 7:36 AM
MorphoGraphX 2.0.2 is now available:
morphographx.org/software/
morphographx.org/software/
RSVP for this upcoming (Oct 23, register by Oct 21) Workshop:
Quantifying Plant Morphogenesis: 4D Insights with MorphoGraphX with Dr. Ya Min & Dr. Shuyao Kong.
Brought to you by PMEX, @plantpostdocs.bsky.social, and NAASC. RSVP @ https:/tinyurl.com/PMEXOctober
@mingyuanzhu.bsky.social
Quantifying Plant Morphogenesis: 4D Insights with MorphoGraphX with Dr. Ya Min & Dr. Shuyao Kong.
Brought to you by PMEX, @plantpostdocs.bsky.social, and NAASC. RSVP @ https:/tinyurl.com/PMEXOctober
@mingyuanzhu.bsky.social
October 6, 2025 at 10:31 PM
RSVP for this upcoming (Oct 23, register by Oct 21) Workshop:
Quantifying Plant Morphogenesis: 4D Insights with MorphoGraphX with Dr. Ya Min & Dr. Shuyao Kong.
Brought to you by PMEX, @plantpostdocs.bsky.social, and NAASC. RSVP @ https:/tinyurl.com/PMEXOctober
@mingyuanzhu.bsky.social
Quantifying Plant Morphogenesis: 4D Insights with MorphoGraphX with Dr. Ya Min & Dr. Shuyao Kong.
Brought to you by PMEX, @plantpostdocs.bsky.social, and NAASC. RSVP @ https:/tinyurl.com/PMEXOctober
@mingyuanzhu.bsky.social
R. Smith demoing the power of
MorphographX
to study plant morphogenesis #EMBOPlant Live Imaging Course
bit.ly/1SOAQ5z
MorphographX
to study plant morphogenesis #EMBOPlant Live Imaging Course
bit.ly/1SOAQ5z
MorphoGraphX
MorphoGraphX is an open source application for the visualization and analysis of 4D biological datasets. Developed by researchers, it is primarily used for the analysis and quantification of 4D live-imaged confocal data. Development of this software continues at the MPIPZ in the Tsiantis department in collaboration with the lead developer Richard Smith from the John Innes Centre. Please visit the MorphoGraphX website here for the latest software packages and documentation.
bit.ly
December 17, 2024 at 1:13 AM
R. Smith demoing the power of
MorphographX
to study plant morphogenesis #EMBOPlant Live Imaging Course
bit.ly/1SOAQ5z
MorphographX
to study plant morphogenesis #EMBOPlant Live Imaging Course
bit.ly/1SOAQ5z
Ideally, is it possible to assign quantitative volumes to all factors controlling the development in whatever plants you are researching on? I want to use MorphoGraphX to reconstruct its complete development process in silico.
doi.org/10.1038/s414...
理想的に言えば、発生に関わる全ての要素に定量的数値を与えることができる？（＝分子Aは時期BにlongitudinalにC、mediolateralにD、細胞を変化させる的な）MorphGraphX、面白い。
理想的に言えば、発生に関わる全ての要素に定量的数値を与えることができる？（＝分子Aは時期BにlongitudinalにC、mediolateralにD、細胞を変化させる的な）MorphGraphX、面白い。
Two orthogonal differentiation gradients locally coordinate fruit morphogenesis - Nature Communications
The coordination of cellular behaviors is essential for proper organogenesis. Here the authors show that fruit development in Arabidopsis is governed by time-shifted differentiation gradients that act...
doi.org
September 28, 2024 at 2:47 PM
Ideally, is it possible to assign quantitative volumes to all factors controlling the development in whatever plants you are researching on? I want to use MorphoGraphX to reconstruct its complete development process in silico.
STM is involved in fruit shape determination in Brassicaceae:
www.nature.com/articles/s41...
#MorphoGraphX
www.nature.com/articles/s41...
#MorphoGraphX
Evolution of a SHOOTMERISTEMLESS transcription factor binding site promotes fruit shape determination - Nature Plants
This study identifies a molecular mechanism promoting fruit shape variation. Local meristem identity is maintained through autoregulatory activation of the STM gene to allow post-fertilization changes...
www.nature.com
December 12, 2024 at 8:05 PM
STM is involved in fruit shape determination in Brassicaceae:
www.nature.com/articles/s41...
#MorphoGraphX
www.nature.com/articles/s41...
#MorphoGraphX
Sören Strauss @StraussSoe from @RichardSmithLab showcasing the organ centric coordinate system and ability to implement deformation functions in the soon available #MorphographX v2 #plantgrowthform2019
December 17, 2024 at 1:33 AM
Sören Strauss @StraussSoe from @RichardSmithLab showcasing the organ centric coordinate system and ability to implement deformation functions in the soon available #MorphographX v2 #plantgrowthform2019