Great explanation for #MicroscopyMonday on when to use or not use a Maximum Intensity Projection during your image analysis. "Extracting 3D information from 2D projections is akin to estimating the volume, surface, and content properties form a crushed beverage can"
Ever wondered if analyzing your images by using intensity Z-projections impacts your data?
Happy to announce my guest article in Microscopy & Analysis on that topic. It's a very short read but worth for everyone dealing with image analysis!
buff.ly/KJ147tI
#Microscopy #ZProjection #ImageAnalysis
Happy to announce my guest article in Microscopy & Analysis on that topic. It's a very short read but worth for everyone dealing with image analysis!
buff.ly/KJ147tI
#Microscopy #ZProjection #ImageAnalysis
November 10, 2025 at 4:54 PM
Great explanation for #MicroscopyMonday on when to use or not use a Maximum Intensity Projection during your image analysis. "Extracting 3D information from 2D projections is akin to estimating the volume, surface, and content properties form a crushed beverage can"
During my postdoc, I looked at hundreds of images like this 🤩
These are two apical caulonemal cells from moss Physcomitrium patens stained with MDY64 (shown in shades of orange). The natural autofluorescence of chlorophyll is in cyan.
#microscopymonday #moss #plantcells #plantmicroscopy
These are two apical caulonemal cells from moss Physcomitrium patens stained with MDY64 (shown in shades of orange). The natural autofluorescence of chlorophyll is in cyan.
#microscopymonday #moss #plantcells #plantmicroscopy
November 10, 2025 at 3:33 PM
During my postdoc, I looked at hundreds of images like this 🤩
These are two apical caulonemal cells from moss Physcomitrium patens stained with MDY64 (shown in shades of orange). The natural autofluorescence of chlorophyll is in cyan.
#microscopymonday #moss #plantcells #plantmicroscopy
These are two apical caulonemal cells from moss Physcomitrium patens stained with MDY64 (shown in shades of orange). The natural autofluorescence of chlorophyll is in cyan.
#microscopymonday #moss #plantcells #plantmicroscopy
This image by MDI Bio Lab's Travis Carney is a #drosophila larval brain. Neural stem cells and neurons are marked, including axons that project into the brain. The flare in the center of each lobe is part of a learning and memory center in flies.
ZEISS Microscopy #microscopymonday 🧪 🤝
ZEISS Microscopy #microscopymonday 🧪 🤝
November 10, 2025 at 3:01 PM
This image by MDI Bio Lab's Travis Carney is a #drosophila larval brain. Neural stem cells and neurons are marked, including axons that project into the brain. The flare in the center of each lobe is part of a learning and memory center in flies.
ZEISS Microscopy #microscopymonday 🧪 🤝
ZEISS Microscopy #microscopymonday 🧪 🤝
worldwide to improve treatments and public health.
Revealing complex parasites in extraordinary detail.
Explore - www.gla.ac.uk/colleges/mvl...
#MicroscopyMonday #Leishmania #Parasitology
Revealing complex parasites in extraordinary detail.
Explore - www.gla.ac.uk/colleges/mvl...
#MicroscopyMonday #Leishmania #Parasitology
University of Glasgow - Colleges - College of Medical, Veterinary & Life Sciences - Shared Research Facilities - Cellular Analysis
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www.gla.ac.uk
November 10, 2025 at 1:44 PM
worldwide to improve treatments and public health.
Revealing complex parasites in extraordinary detail.
Explore - www.gla.ac.uk/colleges/mvl...
#MicroscopyMonday #Leishmania #Parasitology
Revealing complex parasites in extraordinary detail.
Explore - www.gla.ac.uk/colleges/mvl...
#MicroscopyMonday #Leishmania #Parasitology
Happy #MicroscopyMonday everyone! 🌟🔬 Here’s an image from Ivy of outer hair cells (OHCs) and inner hair cells (IHCs) from a P20 mouse.. 🐁✨#Microscopy #HearingResearch #Cochlea #Neuroscience #Neuroskyence
November 10, 2025 at 8:01 AM
Happy #MicroscopyMonday everyone! 🌟🔬 Here’s an image from Ivy of outer hair cells (OHCs) and inner hair cells (IHCs) from a P20 mouse.. 🐁✨#Microscopy #HearingResearch #Cochlea #Neuroscience #Neuroskyence
My new ImageJ / Fiji toolkit is out 🔥! The goal is to make image handling & visualization easy, with an intuitive interface! Install it on Fiji with the "Image Viewer" update site
#microscopy #ImageJ #FluorescenceFriday #microscopyMonday
imagej.net/plugins/imag...
#microscopy #ImageJ #FluorescenceFriday #microscopyMonday
imagej.net/plugins/imag...
November 4, 2025 at 10:40 PM
My new ImageJ / Fiji toolkit is out 🔥! The goal is to make image handling & visualization easy, with an intuitive interface! Install it on Fiji with the "Image Viewer" update site
#microscopy #ImageJ #FluorescenceFriday #microscopyMonday
imagej.net/plugins/imag...
#microscopy #ImageJ #FluorescenceFriday #microscopyMonday
imagej.net/plugins/imag...
📸 Light microscope image of a centric diatom (MBA)
#MicroscopyMonday #MarineScience #Diatoms #Phytoplankton #TeamPlymouth #MarineResearch #Innovation #OceanScience
November 3, 2025 at 3:02 PM
📸 Light microscope image of a centric diatom (MBA)
#MicroscopyMonday #MarineScience #Diatoms #Phytoplankton #TeamPlymouth #MarineResearch #Innovation #OceanScience
Big congratulations to Hannah Somers, Digital Image Analyst at MDI Bio Lab, whose striking visualization of a zebrafish’s brain was named an Image of Distinction in the Nikon Small World competition — and featured by #NationalGeographic!
#researchmatters #microscopymonday #lightsheet 🧪 🤝 🐟🎸 👩🔬
#researchmatters #microscopymonday #lightsheet 🧪 🤝 🐟🎸 👩🔬
MDI Bio Lab’s Hannah Somers’ Image Wins International Recognition
mdibl.org
November 3, 2025 at 3:01 PM
Big congratulations to Hannah Somers, Digital Image Analyst at MDI Bio Lab, whose striking visualization of a zebrafish’s brain was named an Image of Distinction in the Nikon Small World competition — and featured by #NationalGeographic!
#researchmatters #microscopymonday #lightsheet 🧪 🤝 🐟🎸 👩🔬
#researchmatters #microscopymonday #lightsheet 🧪 🤝 🐟🎸 👩🔬
Happy #MicroscopyMonday everyone!🔬🌟Nic has taken a cross-section image of the retina under the microscope: red shows the Retinal Pigment Epithelial cells, orange shows photoreceptor cell bodies with cilia & green shows the outer nuclear layer with just photoreceptor cell bodies 👁️✨
#neuroskyence
#neuroskyence
November 3, 2025 at 9:01 AM
Happy #MicroscopyMonday everyone!🔬🌟Nic has taken a cross-section image of the retina under the microscope: red shows the Retinal Pigment Epithelial cells, orange shows photoreceptor cell bodies with cilia & green shows the outer nuclear layer with just photoreceptor cell bodies 👁️✨
#neuroskyence
#neuroskyence
No tricks—just #fluorescent treats! 🎃
Captured by Romain Menard in the @mdibl-lmf.bsky.social, this #zebrafish shows its vascular (Fli1a:GFP) and motor neuron (mnx1:mCherry) systems glowing under the microscope.
#fluoresencefriday #microscopymonday #fluorescentproteins #lightsheet 🧪 🤝 🐟🎸
Captured by Romain Menard in the @mdibl-lmf.bsky.social, this #zebrafish shows its vascular (Fli1a:GFP) and motor neuron (mnx1:mCherry) systems glowing under the microscope.
#fluoresencefriday #microscopymonday #fluorescentproteins #lightsheet 🧪 🤝 🐟🎸
October 31, 2025 at 3:16 PM
No tricks—just #fluorescent treats! 🎃
Captured by Romain Menard in the @mdibl-lmf.bsky.social, this #zebrafish shows its vascular (Fli1a:GFP) and motor neuron (mnx1:mCherry) systems glowing under the microscope.
#fluoresencefriday #microscopymonday #fluorescentproteins #lightsheet 🧪 🤝 🐟🎸
Captured by Romain Menard in the @mdibl-lmf.bsky.social, this #zebrafish shows its vascular (Fli1a:GFP) and motor neuron (mnx1:mCherry) systems glowing under the microscope.
#fluoresencefriday #microscopymonday #fluorescentproteins #lightsheet 🧪 🤝 🐟🎸
Kirby Campbell just dropped a mind-blowing presentation at #KIDS25! Using cutting-edge FIB-SEM & super-resolution datasets, he’s unveiled how neurons condense chromatin. AI + data science reveal new “flavors” of heterochromatin. Shoutout to the Abbas Shirinifard and NIAL #microscopymonday
October 27, 2025 at 8:10 PM
Kirby Campbell just dropped a mind-blowing presentation at #KIDS25! Using cutting-edge FIB-SEM & super-resolution datasets, he’s unveiled how neurons condense chromatin. AI + data science reveal new “flavors” of heterochromatin. Shoutout to the Abbas Shirinifard and NIAL #microscopymonday
In preparation for Halloween, these chloroplasts had a seance! 👻🎃
These five Arabidopsis chloroplasts were extending their stromules (protrusions of the chloroplast envelope and stroma) towards each other.
#microscopymonday #Arabidopsis #plantcells #plantmicroscopy
These five Arabidopsis chloroplasts were extending their stromules (protrusions of the chloroplast envelope and stroma) towards each other.
#microscopymonday #Arabidopsis #plantcells #plantmicroscopy
October 27, 2025 at 3:44 PM
In preparation for Halloween, these chloroplasts had a seance! 👻🎃
These five Arabidopsis chloroplasts were extending their stromules (protrusions of the chloroplast envelope and stroma) towards each other.
#microscopymonday #Arabidopsis #plantcells #plantmicroscopy
These five Arabidopsis chloroplasts were extending their stromules (protrusions of the chloroplast envelope and stroma) towards each other.
#microscopymonday #Arabidopsis #plantcells #plantmicroscopy
This #microscopymonday image from grad student Olaleye Olajuyin shows a newly formed nephron in an adult #zebrafish. Green: stem cell aggregates that proceed to form a nephron; blue: newly formed nephrons actively proliferating; gray: nuclei cells in the newly formed nephron.
#researchmatters 🧪 🤝
#researchmatters 🧪 🤝
October 27, 2025 at 3:00 PM
This #microscopymonday image from grad student Olaleye Olajuyin shows a newly formed nephron in an adult #zebrafish. Green: stem cell aggregates that proceed to form a nephron; blue: newly formed nephrons actively proliferating; gray: nuclei cells in the newly formed nephron.
#researchmatters 🧪 🤝
#researchmatters 🧪 🤝
This week's #MicroscopyMonday is a time lapse 3D printing of a mini microscope from the MakerLab at Brandeis University.
🥼 Greg Buckland | Head of Brandeis MakerLab
#MicroscopyMonday #Sciencecommunication #BrandeisUniversity #NESM #Microscopy #Science #3D #3DPrinting
🥼 Greg Buckland | Head of Brandeis MakerLab
#MicroscopyMonday #Sciencecommunication #BrandeisUniversity #NESM #Microscopy #Science #3D #3DPrinting
October 27, 2025 at 2:59 PM
This week's #MicroscopyMonday is a time lapse 3D printing of a mini microscope from the MakerLab at Brandeis University.
🥼 Greg Buckland | Head of Brandeis MakerLab
#MicroscopyMonday #Sciencecommunication #BrandeisUniversity #NESM #Microscopy #Science #3D #3DPrinting
🥼 Greg Buckland | Head of Brandeis MakerLab
#MicroscopyMonday #Sciencecommunication #BrandeisUniversity #NESM #Microscopy #Science #3D #3DPrinting
Happy #MicroscopyMonday everyone!🌟🔬 Today's photo comes from Alice showing an scanning electron microscopy image of outer hair cells lacking many stereocilia due to abnormal expression of a protein important for hair bundle maintenance! 🧪🐁
October 27, 2025 at 8:02 AM
Happy #MicroscopyMonday everyone!🌟🔬 Today's photo comes from Alice showing an scanning electron microscopy image of outer hair cells lacking many stereocilia due to abnormal expression of a protein important for hair bundle maintenance! 🧪🐁
Forget #MicroscopyMonday or #FluorescenceFriday — it’s #TrailblazingTuesday!
The lab’s latest flex: a live-cell imaging probe catching Ser2-phosphorylated RNA Pol II CTD in real time Watch transcriptional elongation light up living nuclei!
What’s the coolest thing you’ve seen under a microscope?
The lab’s latest flex: a live-cell imaging probe catching Ser2-phosphorylated RNA Pol II CTD in real time Watch transcriptional elongation light up living nuclei!
What’s the coolest thing you’ve seen under a microscope?
October 21, 2025 at 4:46 PM
Forget #MicroscopyMonday or #FluorescenceFriday — it’s #TrailblazingTuesday!
The lab’s latest flex: a live-cell imaging probe catching Ser2-phosphorylated RNA Pol II CTD in real time Watch transcriptional elongation light up living nuclei!
What’s the coolest thing you’ve seen under a microscope?
The lab’s latest flex: a live-cell imaging probe catching Ser2-phosphorylated RNA Pol II CTD in real time Watch transcriptional elongation light up living nuclei!
What’s the coolest thing you’ve seen under a microscope?
For #MicroscopyMonday a cleared mouse embryos labeled with an antibody targeting neurofilaments (2H3, DSHB) @hhmijanelia.bsky.social @aicjanelia.bsky.social
October 20, 2025 at 5:19 PM
For #MicroscopyMonday a cleared mouse embryos labeled with an antibody targeting neurofilaments (2H3, DSHB) @hhmijanelia.bsky.social @aicjanelia.bsky.social
Tungsten crystals for #MicroscopyMonday from one of our upcoming keynote speakers! #NESM www.nesmicroscopy.org/2025-fall-sy...
🥼: @gewilli.bsky.social, Microscopist
🏛️: Brown University Leduc Bioimaging
🔬: TFS Apreo 2 VS Scanning Electron Microscope, Horizontal Field Width (HFW) = 49μm
🥼: @gewilli.bsky.social, Microscopist
🏛️: Brown University Leduc Bioimaging
🔬: TFS Apreo 2 VS Scanning Electron Microscope, Horizontal Field Width (HFW) = 49μm
October 20, 2025 at 4:29 PM
Tungsten crystals for #MicroscopyMonday from one of our upcoming keynote speakers! #NESM www.nesmicroscopy.org/2025-fall-sy...
🥼: @gewilli.bsky.social, Microscopist
🏛️: Brown University Leduc Bioimaging
🔬: TFS Apreo 2 VS Scanning Electron Microscope, Horizontal Field Width (HFW) = 49μm
🥼: @gewilli.bsky.social, Microscopist
🏛️: Brown University Leduc Bioimaging
🔬: TFS Apreo 2 VS Scanning Electron Microscope, Horizontal Field Width (HFW) = 49μm
This image of moss Physcomitrium patens beautifully demonstrates what we mean when we say that this cell type is characterized by oblique cell walls.
You can see that the cell walls between cells are at an angle and not perpendicular to the cell axis.
#microscopymonday #moss #plantcells
You can see that the cell walls between cells are at an angle and not perpendicular to the cell axis.
#microscopymonday #moss #plantcells
October 20, 2025 at 1:51 PM
This image of moss Physcomitrium patens beautifully demonstrates what we mean when we say that this cell type is characterized by oblique cell walls.
You can see that the cell walls between cells are at an angle and not perpendicular to the cell axis.
#microscopymonday #moss #plantcells
You can see that the cell walls between cells are at an angle and not perpendicular to the cell axis.
#microscopymonday #moss #plantcells
A striking capture by @murawalalab.bsky.social Marko Pende for a 2020 paper in the @aaas.org journal Science Advances (doi.org/10.1126/scia...). It shows the intricate structures of the axolotl — a model for regeneration research.
#standwithscience #researchmatters #microscopymonday 🧪 🤝
#standwithscience #researchmatters #microscopymonday 🧪 🤝
October 20, 2025 at 12:01 PM
A striking capture by @murawalalab.bsky.social Marko Pende for a 2020 paper in the @aaas.org journal Science Advances (doi.org/10.1126/scia...). It shows the intricate structures of the axolotl — a model for regeneration research.
#standwithscience #researchmatters #microscopymonday 🧪 🤝
#standwithscience #researchmatters #microscopymonday 🧪 🤝
Happy #MicroscopyMonday! Learn how to view images that far exceed the RAM of your computer during our webinar tomorrow Oct. 21st at 9:30 or 1800 CEST: svi.nl/webinarinvit... and discover how the support for multi-resolution pyramid files enables you to stitch and visualize extremely large datasets!
WebinarInvitation | Scientific Volume Imaging
Scientific Volume Imaging to provides reliable, high quality, easy to use image processing tools for scientists working in light microscopy. Together with a dedicated team in close contact with the in...
svi.nl
October 20, 2025 at 9:19 AM
Happy #MicroscopyMonday! Learn how to view images that far exceed the RAM of your computer during our webinar tomorrow Oct. 21st at 9:30 or 1800 CEST: svi.nl/webinarinvit... and discover how the support for multi-resolution pyramid files enables you to stitch and visualize extremely large datasets!
#microscopymonday video on a multitalented housekeeper in the #brain: Watch amidst #neurons an #astrocyte. The astrocyte phagocytoses debris but is rather stationary compared to the bypassing #microglia cell. #Neurons thrive around the astrocyte and outgrow neurites.
October 19, 2025 at 5:32 PM
#microscopymonday video on a multitalented housekeeper in the #brain: Watch amidst #neurons an #astrocyte. The astrocyte phagocytoses debris but is rather stationary compared to the bypassing #microglia cell. #Neurons thrive around the astrocyte and outgrow neurites.
Happy Halloween month edition of #MicroscopyMonday! Am I the only one who thinks this cell looks like Slimer from Ghostbusters? This is a confocal image of a SHH-expressing fibroblast with long cytonemes reaching toward neighboring cells 🔬 by @stjuderesearch.bsky.social grad student Christina Wang 🧪
October 13, 2025 at 4:44 PM
Happy Halloween month edition of #MicroscopyMonday! Am I the only one who thinks this cell looks like Slimer from Ghostbusters? This is a confocal image of a SHH-expressing fibroblast with long cytonemes reaching toward neighboring cells 🔬 by @stjuderesearch.bsky.social grad student Christina Wang 🧪
It's #MicroscopyMonday and we are only three weeks away from the #NESM Fall Symposium! We still have opportunities for poster and oral presentations for researchers, vendors and core facilities, link here: www.nesmicroscopy.org/2025-fall-sy...
#Microscopy #LightSheet #3DPrinting #SEM #LSFM #SciComm
#Microscopy #LightSheet #3DPrinting #SEM #LSFM #SciComm
October 13, 2025 at 4:30 PM
It's #MicroscopyMonday and we are only three weeks away from the #NESM Fall Symposium! We still have opportunities for poster and oral presentations for researchers, vendors and core facilities, link here: www.nesmicroscopy.org/2025-fall-sy...
#Microscopy #LightSheet #3DPrinting #SEM #LSFM #SciComm
#Microscopy #LightSheet #3DPrinting #SEM #LSFM #SciComm
The new issue of #CYTOSKELETON is now out! You can check out the issues here: onlinelibrary.wiley.com/toc/19493592... #microscopymonday
October 13, 2025 at 3:50 PM
The new issue of #CYTOSKELETON is now out! You can check out the issues here: onlinelibrary.wiley.com/toc/19493592... #microscopymonday