thank you for listening to my EEG TED talk! (the vibes from these chairs 😅).
we ran a MNE-python tutorial for >100 people for a week. the program going from preprocessing to source estimation to group analysis was ambitious, but I hope seeing all the steps involved was helpful for participants. 🙂
we ran a MNE-python tutorial for >100 people for a week. the program going from preprocessing to source estimation to group analysis was ambitious, but I hope seeing all the steps involved was helpful for participants. 🙂
this week at #PracticalMEEG2025 in Aix!
having run an MEG pipeline by trial and error, I was doubting myself between all parameters. lectures on the analysis steps + hands-on application together were very helpful!
& seeing women on stage sharing what they're excited about just hits different ⭐️
having run an MEG pipeline by trial and error, I was doubting myself between all parameters. lectures on the analysis steps + hands-on application together were very helpful!
& seeing women on stage sharing what they're excited about just hits different ⭐️
November 3, 2025 at 7:23 AM
thank you for listening to my EEG TED talk! (the vibes from these chairs 😅).
we ran a MNE-python tutorial for >100 people for a week. the program going from preprocessing to source estimation to group analysis was ambitious, but I hope seeing all the steps involved was helpful for participants. 🙂
we ran a MNE-python tutorial for >100 people for a week. the program going from preprocessing to source estimation to group analysis was ambitious, but I hope seeing all the steps involved was helpful for participants. 🙂
Last week I was being trained as a #MNE-Python TrainEErs at #PracticalMEEG2025 - it was a lot of fun to look behind the scenes and learn how to run a good workshop :) thanks to @cuttingeeg.bsky.social for hosting and Marijn van Vliet and @nschawor.bsky.social for organizing this amazing workshop!
November 2, 2025 at 9:20 AM
Last week I was being trained as a #MNE-Python TrainEErs at #PracticalMEEG2025 - it was a lot of fun to look behind the scenes and learn how to run a good workshop :) thanks to @cuttingeeg.bsky.social for hosting and Marijn van Vliet and @nschawor.bsky.social for organizing this amazing workshop!
I will be there to help out with the MNE-python track! 🙂
🧠🧑💻〰️
🧠🧑💻〰️
What are you doing on 28-31 October 2025?
Save the date & join us at PracticalMEEG 3d edition in Aix-en-Pce with hands-on training in MEEG data, plenary lectures & other exciting new features like posters sessions, toolbox bouquet and more: cuttingeeg.org/practicalmee...
Registration coming soon!
Save the date & join us at PracticalMEEG 3d edition in Aix-en-Pce with hands-on training in MEEG data, plenary lectures & other exciting new features like posters sessions, toolbox bouquet and more: cuttingeeg.org/practicalmee...
Registration coming soon!
March 26, 2025 at 10:45 AM
I will be there to help out with the MNE-python track! 🙂
🧠🧑💻〰️
🧠🧑💻〰️
Great question! Our Performance Metric report pipelines remove noisy data segments based on overall signal quality, and ERP pipelines use a +/-100uV threshold to remove movement artifacts. You can also export the noisy data and use EEGLab or MNE Python for clean-up.
November 25, 2024 at 10:46 PM
Great question! Our Performance Metric report pipelines remove noisy data segments based on overall signal quality, and ERP pipelines use a +/-100uV threshold to remove movement artifacts. You can also export the noisy data and use EEGLab or MNE Python for clean-up.
I’d say go with MNE if you are more familiar with Python than Matlab. From my understanding MNE can do pretty much everything EEGLab and associated plugins can, but you could always load MNE processed data into EEGLab if you needed something specific to EEGLab.
April 13, 2024 at 1:16 AM
I’d say go with MNE if you are more familiar with Python than Matlab. From my understanding MNE can do pretty much everything EEGLab and associated plugins can, but you could always load MNE processed data into EEGLab if you needed something specific to EEGLab.
An important call from a lot of people I worked together with on MNE Python.
If you use free open source software for your research, please read this.
It's a lot of work building the tools that we as scientists use. In turn, we can help them by e.g. citing them correctly.
If you use free open source software for your research, please read this.
It's a lot of work building the tools that we as scientists use. In turn, we can help them by e.g. citing them correctly.
New paper in Imaging Neuroscience by Britta U. Westner, Tim M. Tierney, et al:
Cycling on the Freeway: The perilous state of open-source neuroscience software
doi.org/10.1162/imag...
Cycling on the Freeway: The perilous state of open-source neuroscience software
doi.org/10.1162/imag...
May 7, 2025 at 7:44 AM
An important call from a lot of people I worked together with on MNE Python.
If you use free open source software for your research, please read this.
It's a lot of work building the tools that we as scientists use. In turn, we can help them by e.g. citing them correctly.
If you use free open source software for your research, please read this.
It's a lot of work building the tools that we as scientists use. In turn, we can help them by e.g. citing them correctly.
#BIDS and #EEG question:
How do you get/what resources do you suggest -- to someone (me) 1) recording EEG data from a Biosemi system/actiview, 2) mainly using MNE python for analyses, 3) often with the help of relatively unexperienced students -- to store data in the BIDS format?
How do you get/what resources do you suggest -- to someone (me) 1) recording EEG data from a Biosemi system/actiview, 2) mainly using MNE python for analyses, 3) often with the help of relatively unexperienced students -- to store data in the BIDS format?
January 16, 2025 at 9:15 AM
Aah, got it! Both of these make sense. We're in the pre-pre-pre-initial stages of building an OPM lab (am I jinxing myself by saying it?) and my pipeline's in MNE-Python, so going to keep a very close eye on this
May 8, 2025 at 3:09 PM
Aah, got it! Both of these make sense. We're in the pre-pre-pre-initial stages of building an OPM lab (am I jinxing myself by saying it?) and my pipeline's in MNE-Python, so going to keep a very close eye on this
(I will be in Aix-en-Provence next week, at the on-site part of the event to help out with the more extensive mne-python course. it will be intense. 🙃)
October 24, 2025 at 2:08 PM
(I will be in Aix-en-Provence next week, at the on-site part of the event to help out with the more extensive mne-python course. it will be intense. 🙃)
MNE looks really promising, too, if you are being graced with the permission to install it. Python can be a pain to deal with though, particularly regarding version and package compatibility.
June 10, 2024 at 8:57 AM
MNE looks really promising, too, if you are being graced with the permission to install it. Python can be a pain to deal with though, particularly regarding version and package compatibility.
I've just released MNELAB 1.0.4 (a GUI for MNE-Python, a package for analyzing EEG/MEG data), which now includes standalone installers for macOS and Windows:
github.com/cbrnr/mnelab
#EEG #Python
github.com/cbrnr/mnelab
#EEG #Python
GitHub - cbrnr/mnelab: MNELAB – a GUI for MNE
MNELAB – a GUI for MNE. Contribute to cbrnr/mnelab development by creating an account on GitHub.
github.com
July 28, 2025 at 8:53 AM
I've just released MNELAB 1.0.4 (a GUI for MNE-Python, a package for analyzing EEG/MEG data), which now includes standalone installers for macOS and Windows:
github.com/cbrnr/mnelab
#EEG #Python
github.com/cbrnr/mnelab
#EEG #Python
Trouble parsing those tricky binary biomedical files? We put Gemini AI to the test, using MNE-Python & WFDB on Google Colab to tackle real-world EEG data acquisition from PhysioNet. Watch the full troubleshooting process, including how we dealt with non-standard .event files!
👉 youtu.be/F_t322FnXuc
👉 youtu.be/F_t322FnXuc
EEG Dataset Acquisition & Analysis: Gemini AI, MNE-Python, and WFDB Library Tutorial on Google Colab
YouTube video by BioniChaos
youtu.be
October 9, 2025 at 9:57 AM
Trouble parsing those tricky binary biomedical files? We put Gemini AI to the test, using MNE-Python & WFDB on Google Colab to tackle real-world EEG data acquisition from PhysioNet. Watch the full troubleshooting process, including how we dealt with non-standard .event files!
👉 youtu.be/F_t322FnXuc
👉 youtu.be/F_t322FnXuc
From EEG to ERP: Implementing FASTER and ISD Methods in Python Using MNE In A General Reliable Automated Preprocessing EEG (GRAPE) Pipeline: http://osf.io/5wpy8/
June 19, 2024 at 4:28 PM
From EEG to ERP: Implementing FASTER and ISD Methods in Python Using MNE In A General Reliable Automated Preprocessing EEG (GRAPE) Pipeline: http://osf.io/5wpy8/
You can do EEG analysis with MNE-Python. An overview can be found here: mne.tools/dev/auto_tut...
It was developed with a slight preference for MEG so you may have to adjust your EEG a little to make everything smooth.
It was developed with a slight preference for MEG so you may have to adjust your EEG a little to make everything smooth.
Overview of MEG/EEG analysis with MNE-Python — MNE 1.8.0.dev64+g07f429eee documentation
mne.tools
June 9, 2024 at 2:57 PM
You can do EEG analysis with MNE-Python. An overview can be found here: mne.tools/dev/auto_tut...
It was developed with a slight preference for MEG so you may have to adjust your EEG a little to make everything smooth.
It was developed with a slight preference for MEG so you may have to adjust your EEG a little to make everything smooth.
From EEG to ERP: Implementing FASTER and ISD Methods in Python Using MNE In A General Reliable Automated Preprocessing EEG (GRAPE) Pipeline: http://osf.io/5wpy8/
June 19, 2024 at 4:32 PM
From EEG to ERP: Implementing FASTER and ISD Methods in Python Using MNE In A General Reliable Automated Preprocessing EEG (GRAPE) Pipeline: http://osf.io/5wpy8/
Multi-Source Neural Activity Indices and Spatial Filters for EEG/MEG Inverse Problem: An Extension to MNE-Python https://www.biorxiv.org/content/10.1101/2025.09.15.676243v1
September 18, 2025 at 12:15 AM
Multi-Source Neural Activity Indices and Spatial Filters for EEG/MEG Inverse Problem: An Extension to MNE-Python https://www.biorxiv.org/content/10.1101/2025.09.15.676243v1
Multi-Source Neural Activity Indices and Spatial Filters for EEG/MEG Inverse Problem: An Extension to MNE-Python https://www.biorxiv.org/content/10.1101/2025.09.15.676243v1
September 18, 2025 at 12:15 AM
Multi-Source Neural Activity Indices and Spatial Filters for EEG/MEG Inverse Problem: An Extension to MNE-Python https://www.biorxiv.org/content/10.1101/2025.09.15.676243v1
Making my OPM-MEG preproc pipeline open-source
github.com/harrisonritz...
- built on MNE & osl-ephys
- python port of AMM
- OPM-friendly ICA GUI
- flexible yaml configuration
- BIDS converter
🧪🧠📈
github.com/harrisonritz...
- built on MNE & osl-ephys
- python port of AMM
- OPM-friendly ICA GUI
- flexible yaml configuration
- BIDS converter
🧪🧠📈
GitHub - harrisonritz/opm-preproc: OPM preprocessing using mne-python & osl-ephys
OPM preprocessing using mne-python & osl-ephys. Contribute to harrisonritz/opm-preproc development by creating an account on GitHub.
github.com
February 11, 2025 at 12:47 PM
Making my OPM-MEG preproc pipeline open-source
github.com/harrisonritz...
- built on MNE & osl-ephys
- python port of AMM
- OPM-friendly ICA GUI
- flexible yaml configuration
- BIDS converter
🧪🧠📈
github.com/harrisonritz...
- built on MNE & osl-ephys
- python port of AMM
- OPM-friendly ICA GUI
- flexible yaml configuration
- BIDS converter
🧪🧠📈
Za čtyři dny končí Fakturoid APIv2 a je potřeba přejít na APIv3. Existuje naštěstí fork původního modulu pro Python.
https://github.com/jan-tomek/python-fakturoid
Vytahuju se: našel jsem tam chybu, a @loar mi ji pomohla opravit.
Co mne bavíc nejvíc - ten původní modul opravovala spousta lidí […]
https://github.com/jan-tomek/python-fakturoid
Vytahuju se: našel jsem tam chybu, a @loar mi ji pomohla opravit.
Co mne bavíc nejvíc - ten původní modul opravovala spousta lidí […]
Original post on hachyderm.io
hachyderm.io
March 27, 2025 at 5:07 PM
Za čtyři dny končí Fakturoid APIv2 a je potřeba přejít na APIv3. Existuje naštěstí fork původního modulu pro Python.
https://github.com/jan-tomek/python-fakturoid
Vytahuju se: našel jsem tam chybu, a @loar mi ji pomohla opravit.
Co mne bavíc nejvíc - ten původní modul opravovala spousta lidí […]
https://github.com/jan-tomek/python-fakturoid
Vytahuju se: našel jsem tam chybu, a @loar mi ji pomohla opravit.
Co mne bavíc nejvíc - ten původní modul opravovala spousta lidí […]
Deep dive into EEG data science! 🔬 We use MNE-Python to clean, filter (1-40Hz), and epoch brain signals, then stitch it all into a dynamic topomap animation. Major troubleshooting required for undocumented event files! Full process: youtu.be/tO3f2gNVSMg #EEG #BCI #Python
EEG Brain Signal Analysis in Python: MNE, Filtering, and Animated Topomaps
YouTube video by BioniChaos
youtu.be
October 12, 2025 at 9:51 AM
Deep dive into EEG data science! 🔬 We use MNE-Python to clean, filter (1-40Hz), and epoch brain signals, then stitch it all into a dynamic topomap animation. Major troubleshooting required for undocumented event files! Full process: youtu.be/tO3f2gNVSMg #EEG #BCI #Python
🚨Registration for #PracticalMEEG 2025 opens June 12th, 2025 at 10am CEST!
📍Aix-en-Provence | Oct 28–31, 2025
🚀Spots go fast—get ready!
💻Pick your toolbox [Brainstorm, FieldTrip, EEGLAB, MNE-python] & join hands-on training, lectures, posters, toolbox bouquet & more
👉 cuttingeeg.org/practicalmee...
📍Aix-en-Provence | Oct 28–31, 2025
🚀Spots go fast—get ready!
💻Pick your toolbox [Brainstorm, FieldTrip, EEGLAB, MNE-python] & join hands-on training, lectures, posters, toolbox bouquet & more
👉 cuttingeeg.org/practicalmee...
June 3, 2025 at 2:44 PM
🚨Registration for #PracticalMEEG 2025 opens June 12th, 2025 at 10am CEST!
📍Aix-en-Provence | Oct 28–31, 2025
🚀Spots go fast—get ready!
💻Pick your toolbox [Brainstorm, FieldTrip, EEGLAB, MNE-python] & join hands-on training, lectures, posters, toolbox bouquet & more
👉 cuttingeeg.org/practicalmee...
📍Aix-en-Provence | Oct 28–31, 2025
🚀Spots go fast—get ready!
💻Pick your toolbox [Brainstorm, FieldTrip, EEGLAB, MNE-python] & join hands-on training, lectures, posters, toolbox bouquet & more
👉 cuttingeeg.org/practicalmee...
CuttingGardens conference has started in Ghent! @josheayrs.bsky.social is giving a tutorial on EEG preprocessing using MNE python toolbox now 🤯💻
October 16, 2023 at 9:38 AM
CuttingGardens conference has started in Ghent! @josheayrs.bsky.social is giving a tutorial on EEG preprocessing using MNE python toolbox now 🤯💻
Join MentaLABS this Thursday for a hands-on MNE-Python EEG workshop with Dr. Elizabeth Mills from the University of San Diego! 🧠
📅 25.09.2025
⏰ 5pm CET
📍 Online via Zoom
Register here 👉 zoom.us/webinar/regi...
📅 25.09.2025
⏰ 5pm CET
📍 Online via Zoom
Register here 👉 zoom.us/webinar/regi...
Welcome! You are invited to join a webinar: MentaLABS - Learning about Biosignals Series. After registering, you will receive a confirmation email about joining the webinar.
Join us at the webinar series, where researchers and collaborators share their work, ideas, and motivations in the biosignal space.
zoom.us
September 22, 2025 at 9:55 AM
Join MentaLABS this Thursday for a hands-on MNE-Python EEG workshop with Dr. Elizabeth Mills from the University of San Diego! 🧠
📅 25.09.2025
⏰ 5pm CET
📍 Online via Zoom
Register here 👉 zoom.us/webinar/regi...
📅 25.09.2025
⏰ 5pm CET
📍 Online via Zoom
Register here 👉 zoom.us/webinar/regi...
The tutorial @mengqiaochai.bsky.social and I created for this can be found here: tinyurl.com/2fce7hzc
It's an expansion of the MNE Python tutorial by Britta Westner: tinyurl.com/34ybjj8m
#EEG
It's an expansion of the MNE Python tutorial by Britta Westner: tinyurl.com/34ybjj8m
#EEG
The second day of CuttingGardens in Ghent. We are giving a tutorial about using machine learning techniques on MEEG data. So let’s do some decoding together 📚💻! @raquellondon.bsky.social @cuttingeeg.bsky.social
October 20, 2023 at 9:16 AM
The tutorial @mengqiaochai.bsky.social and I created for this can be found here: tinyurl.com/2fce7hzc
It's an expansion of the MNE Python tutorial by Britta Westner: tinyurl.com/34ybjj8m
#EEG
It's an expansion of the MNE Python tutorial by Britta Westner: tinyurl.com/34ybjj8m
#EEG
📢 Libertex Group is #hiring a Senior Machine Learning Engineer (Relocation to MNE)!
🌎 Worldwide
👵 Senior
🔗 http://jbs.ink/Xfpxg2bsaFt0
#jobalert #jobsearch #remotejob #remotework #wfh #python #aws #machinelearning #pytorch #docker #sql #kafka #marketing
🌎 Worldwide
👵 Senior
🔗 http://jbs.ink/Xfpxg2bsaFt0
#jobalert #jobsearch #remotejob #remotework #wfh #python #aws #machinelearning #pytorch #docker #sql #kafka #marketing
September 10, 2025 at 8:48 PM
📢 Libertex Group is #hiring a Senior Machine Learning Engineer (Relocation to MNE)!
🌎 Worldwide
👵 Senior
🔗 http://jbs.ink/Xfpxg2bsaFt0
#jobalert #jobsearch #remotejob #remotework #wfh #python #aws #machinelearning #pytorch #docker #sql #kafka #marketing
🌎 Worldwide
👵 Senior
🔗 http://jbs.ink/Xfpxg2bsaFt0
#jobalert #jobsearch #remotejob #remotework #wfh #python #aws #machinelearning #pytorch #docker #sql #kafka #marketing