#JSDM
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cranupdates.bsky.social
Updates on CRAN: CompositionalClust (1.2), hedgehog (0.2), jSDM (0.2.7), latentFactoR (0.0.7), mini007 (0.2.1), nanonext (1.7.2), philentropy (0.10.0), priorCON (0.1.7), schwabr (0.1.4), sdbuildR (1.0.7)
November 3, 2025 at 1:32 PM
cranberriesfeed.bsky.social
CRAN updates: CompositionalClust hedgehog jSDM mini007 nanonext #rstats
November 3, 2025 at 10:02 AM
joelfishecology.bsky.social
This study highlights the importance of long-term monitoring to be able to detect change, particularly in these highly remote and important areas. The JSDM approach is very powerful and provides information at the species assemblage level.

Photo: Henry Wilson / AFMS
October 22, 2025 at 1:05 AM
frodsan.bsky.social
An extension of joint SDM to jointly model species abundances and intraspecific trait variation. #ecopubs @esajournals.bsky.social

doi.org/10.1002/ecy....
Joint species-trait distribution modeling: The role of intraspecific trait variation in community assembly The links between intraspecific trait variation and community assembly remain little studied, partially due to the lack of statistical methods to jointly model intraspecific trait variation and species abundances at the community level. Here, we extend the joint species distribution modeling (JSDM) framework into the joint species-trait distribution modeling (JSTDM) framework to explicitly link species abundances to phenotypic variation in traits for multiple species simultaneously. Using a case study of 65 tundra plant species abundances and 3 key functional traits measured across 325 sites, we show how the JSTDM approach (1) estimates the statistical associations among species abundances, species-level traits, and site-level traits, relative to environmental variation; (2) improves predictions on trait variation by using information on species abundances; and (3) generates hypotheses about trait-driven community assembly mechanisms. The JSTDM methodology presented in this study allows assessing the interplay between species abundances and traits at the community level, providing the much needed modeling tools to quantify the role of phenotypic trait variation in eco-evolutionary community assembly.
September 8, 2025 at 11:20 AM
helixbrief.bsky.social
This study introduces a novel Joint Species Distribution Model (JSDM) called ZIPLN-network that directly models count data while accounting for the ubiquitous zero-inflation in species occurrence datasets.
August 15, 2025 at 12:51 AM
helixbrief.bsky.social
🧬 New research: A JSDM with zero-inflation to increase the ecological relevance of analyses of species distribution data....

🧵 Thread below

Full analysis: https://helixbrief.com/article/ea81f02b-695a-4752-9278-99ec8a835e58
August 15, 2025 at 12:51 AM
teinka.bsky.social
Ale tak klasika, daří se mi, na co sáhnu, to nemohu říct 😂 mluvím úplné nesmysle, ato jsdm zcela střízliva, a jako bonus na závěr, jsem místo Chodova dojela na Arkády (úplně jine obchodní centrum), naštěstí to neni úplně daleko, ale i tak pozdě.
August 11, 2025 at 4:59 PM
jpecol.bsky.social
【🎉Latest accepted article】
#ClimaticAndNon-climaticEffects on #SpeciesOccurrenceAndAbundance shift in different trends along #ElevationalGradients

#CommunityAssembly #JointSpeciesDistributionModel (JSDM)

@mapjournals.bsky.social ‪
pku1898.bsky.social‬doi.org/10.1093/jpe/...22
Climatic and non-climatic effects on species occurrence and abundance shift in different trends along elevational gradients
Abstract. The distribution and assembly of plant species is a fundamental ecological question. Understanding how various drivers of community assembly vary
doi.org
August 9, 2025 at 2:47 PM
biorxiv-ecology.bsky.social
A JSDM with zero-inflation to increase the ecological relevance of analyses of species distribution data. https://www.biorxiv.org/content/10.1101/2025.07.24.666553v1
July 31, 2025 at 1:31 PM
biorxivpreprint.bsky.social
A JSDM with zero-inflation to increase the ecological relevance of analyses of species distribution data. https://www.biorxiv.org/content/10.1101/2025.07.24.666553v1
July 31, 2025 at 1:31 PM
vvendy15.bsky.social
Po dobe jsem hodne deeply depressed a moje psychiatricka mi napsala ze jsdm moc casto nemocna ze to nepujde takze going off of meds 👼
June 11, 2025 at 9:25 AM
vdveenb.bsky.social
Sifting through predictions of a JSDM for Swiss birds be like
A stack of predictions from a JSDM for Swiss birds
May 12, 2025 at 8:26 AM
benjamin-weigel.bsky.social
Still time to apply for doing a PhD with us!

Curious about how estuarine restoration shapes fish communities? We’re looking for someone to explore this using trait-based approaches and community models.
👇
jobs.inrae.fr/en/ot-25533

#PhD #Ecology #Restoration #Estuaries #Biodiversity #JSDM #INRAE
May 9, 2025 at 7:22 AM
teinka.bsky.social
No jasně, já mám taky kuchyň na prd, ale mame domeček, tak se to proste vlezlo a mrazák je vedle garaze tepelka a bojleru. Souš jsdm tim chtela demonstrovat, ze bez ohledu na velikost chladicích zařízení to vzdy dopadne totálním narvalem, anžto jsem debil.
May 1, 2025 at 10:22 AM
teinka.bsky.social
2/x ale co prd velebnosti. Na my slova vždy došlo. Jeste nedávno tchyne tvrdila, ze byt chce nechat Eli a my vyplatíme švagrovou minus cenu chalupy, kterou jim koupila. Víte co, nespoléhala jsdm na to, ale nejak jsem to brala vůči muži a dceři jako fer.
April 18, 2025 at 4:29 PM
safenet-eu.bsky.social
🌿 Join @luke.fi & @helsinki.fi for part 2 of the timely seminar series: "Using Joint Species Distribution Models (JSDMs) to understand ecological communities under change."

📆 12/05 (10-14 EEST)
📍 Hybrid Viikki Campus (Helsinki)/online

🔗 Register: bit.ly/JSDMs

#JSDM #Biodiversity #Ecology
April 17, 2025 at 10:57 AM
safenet-eu.bsky.social
🌿 On 14/04, @luke.fi & @helsinki.fi hosted JSDM experts discussing HMSC & iSDM approaches to model ecological communities under change.

Excellent presentation from:
Otso Ovaskainen
Martin Jung
Maximilian Pichler
Jussi Mäkinen

@mikkopel.bsky.social @mdpashkevich.bsky.social

More coming 12/05!
April 17, 2025 at 10:49 AM
etfmarknaden.bsky.social
JPMorgan Global Emerging Markets Research Enhanced Index Equity SRI Paris Aligned Active UCITS ETF USD (dist) (JSDM #ETF), med ISIN IE000CYGD0V1, är en aktivt förvaltad börshandlad fond.

www.etfmarknaden.se/jsdm-etf-akt...
JSDM ETF aktiv förvaltning av aktier från emerging markets
JPMorgan Global Emerging Markets Research Enhanced Index Equity SRI Paris Aligned Active UCITS ETF USD (dist) (JSDM ETF), med ISIN IE000CYGD0V1, är en aktivt förvaltad börshandlad fond. JP Morgan Glob...
www.etfmarknaden.se
April 15, 2025 at 3:08 PM
vdveenb.bsky.social
Looking around for a dataset <40 species for demonstrating JSDM in a presentation. The number of papers with incorrect data statements ("no data was used" or "dryad link will be made available upon request"-years after publication) is truly mind boggling.
April 4, 2025 at 12:14 PM
benjamin-weigel.bsky.social
🚨 PhD Opportunity! 🚨
Join us in exploring the impacts of estuarine restoration! 🌊🐟 We’re looking for a PhD candidate to evaluate restoration effects using community modeling & trait-based approaches.
All details here jobs.inrae.fr/en/ot-25533
#PhD #Ecology #Estuaries #Restoration #Biodiversity #JSDM
April 2, 2025 at 7:48 AM
jarnovanhatalo.bsky.social
Our study showed also the potential of JSDM paired with trait distribution parameters to reveal changes, and their drivers, in biodiversity. This method was supported also by our forest understorey analysis with @elinakaarlej.bsky.social and others:
doi.org/10.1002/ecy....

4/4
Inferring ecological selection from multidimensional community trait distributions along environmental gradients
Understanding the drivers of community assembly is critical for predicting the future of biodiversity and ecosystem services. Ecological selection ubiquitously shapes communities by selecting for ind...
doi.org
March 17, 2025 at 11:11 AM
mikkopel.bsky.social
SafeNet #HEUProject aims at supporting conservation-management efforts and policies at local & EU levels. @luke.fi and @uniofjyvaskyla.bsky.social teams proudly presenting their project poster at #OikosFin2025 conference. @safenet-eu.bsky.social #OldGrowthForests @oikosfinland.bsky.social #JSDM
March 12, 2025 at 7:59 PM
pauliarancibia.bsky.social
A great start to the #OIKOSFin2025 conference with a JSDM workshop.
Now we can all HMSC like Otso Ovaskainen 💻📈
🌐
March 11, 2025 at 2:37 PM
safenet-eu.bsky.social
🌿 #SafeNet is heading to #OikosFinland2025 Conference next week (11-14/03)🌿

Look out for our poster and our partners: @luke.fi & @uniofjyvaskyla.bsky.social

Check out the #JSDM #HMSC workshop on predicting species responses to climate change!

Tag us if you spot us! ✨

www.jyu.fi/en/events/oi...
Oikos-Finland 2025 Conference
Oikos-Finland 2025 Conference is to be hold in Jyväskylä 11th-14th March 2025.
www.jyu.fi
March 7, 2025 at 11:39 AM
ecography.bsky.social
Assembly processes inferred from eDNA surveys of a pond metacommunity are consistent with known species ecologies https://nsojournals.onlinelibrary.wiley.com/doi/10.1111/ecog.07461 #jSDM #eDNA #metabarcoding
March 7, 2025 at 9:26 AM