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evolvedbiofilm.bsky.social
Carbon source diversity shapes bacterial interspecies interactions

#ISMEJournal

academic.oup.com/ismej/advanc...
Carbon source diversity shapes bacterial interspecies interactions
Abstract. Bacterial communities exhibit various classes of interspecies interactions, ranging from synergistic to competitive. As these interaction classes
academic.oup.com
October 9, 2025 at 8:07 AM
evolvedbiofilm.bsky.social
Half of microbial eukaryote literature focuses on only twelve human parasites

-in #ISMEJournal by Joanna Lepper, @hbrappap.bsky.social and @oliverio.bsky.social

academic.oup.com/ismej/advanc...
Half of microbial eukaryote literature focuses on only twelve human parasites
Abstract. Although microbial eukaryotes comprise the majority of eukaryotic phylogenetic diversity and inhabit nearly all ecosystems globally, most researc
academic.oup.com
October 8, 2025 at 1:12 PM
evolvedbiofilm.bsky.social
Algae-fungi symbioses and bacteria-fungi co-exclusion drive tree species-specific differences in canopy bark microbiomes

#ISMEJournal by Jule Freudenthal et al from Michael Bonkowski

academic.oup.com/ismej/advanc...
Algae-fungi symbioses and bacteria-fungi co-exclusion drive tree species-specific differences in canopy bark microbiomes
Abstract. With over 3 trillion trees, forest ecosystems comprise nearly one-third of the terrestrial surface of the Earth. Very little attention has been g
academic.oup.com
October 19, 2024 at 10:42 AM
friendlymicrobe.bsky.social
Smashing paper in @ISMEJournal: evolution of #Pseudomonas during CF infection alters interactions w/ S. aureus, #AMR https://t.co/KCNiAefPhx
February 19, 2016 at 10:22 AM
gibbological.bsky.social
Evidence for widespread use of hydrogen as energy source in both aerobic and anaerobic environments! @ISMEJournal <a href="http://www.nature.com/ismej/journal/vaop/ncurrent/full/ismej2015153a.html" class="hover:underline text-blue-600 dark:text-sky-400 no-card-link" target="_blank" rel="noopener" data-link="bsky">http://www.nature.com/ismej/journal/vaop/ncurrent/full/ismej2015153a.html
Browse Articles | The ISME Journal
Browse the archive of articles on The ISME Journal
www.nature.com
November 13, 2024 at 7:33 PM
evolvedbiofilm.bsky.social
Horizontal transmission of heat-evolved microalgal symbionts in adult corals

in #ISMEJournal by Bede Johnston et al

academic.oup.com/ismej/advanc...
Horizontal transmission of heat-evolved microalgal symbionts in adult corals
Abstract. Traditional coral reef restoration methods often fail to consider rising sea-surface temperatures driven by climate change. The introduction of e
academic.oup.com
August 4, 2025 at 9:18 AM
evolvedbiofilm.bsky.social
In vivo evolution of antimicrobial resistance in a biofilm model of Pseudomonas aeruginosa lung infection

#ISMEJournal from Oana Ciofu
with Claus Moser, Lars Jelsbak, Nils Høiby, @cvhasselt.bsky.social

academic.oup.com/ismej/advanc...
March 14, 2024 at 7:56 AM
evolvedbiofilm.bsky.social
Strong segregation promotes self-destructive cooperation

-in #ISMEJournal

academic.oup.com/ismej/advanc...
Strong segregation promotes self-destructive cooperation
Abstract. Self-destructive cooperators, which sacrifice themselves for others, challenge traditional group selection theory, as costs often exceed individu
academic.oup.com
March 18, 2025 at 7:34 PM
sotarot.bsky.social
Our paper is now out in ISMEJournal. “Diversification of single-cell growth dynamics under starvation influences subsequent reproductivity of progeny cells in a clonal bacterial population” academic.oup.com/ismej/articl...
Diversification of single-cell growth dynamics under starvation influences subsequent reproduction in a clonal bacterial population
Abstract. Most of the microbes in nature infrequently receive nutrients and are thus in slow- or non-growing states. How quickly they can resume their grow
academic.oup.com
January 30, 2025 at 3:41 AM
evolvedbiofilm.bsky.social
Low-level resource partitioning supports coexistence among functionally redundant bacteria during successional dynamics

ISMEJournal from Martin Polz

academic.oup.com/ismej/advanc...
January 11, 2024 at 9:56 AM
primecollaboration.bsky.social
❓How do #marinebacteria navigate and compete for #phytoplankton -derived organic matter hotspots — and what happens when their microbial neighbors 🦠tag along❓

Check out this exciting PriME collaborative work, just published in @ISMEJournal! 😃👏👇
academic.oup.com/ismej/advanc...
Chemotaxis, growth, and inter-species interactions shape early bacterial community assembly
Abstract. From the perspective of a marine copiotrophic bacterium, the surface ocean is a mosaic of exploitable hotspots of organic matter released from li
academic.oup.com
June 19, 2025 at 9:27 AM
evolvedbiofilm.bsky.social
Another SynCom review (rationally design) in #ISMEJournal from Ramon Santos-Bermudez at University of Jinan

Engineering Plant Holobionts for Climate-Resilient Agriculture

academic.oup.com/ismej/advanc...
Engineering Plant Holobionts for Climate-Resilient Agriculture
Abstract. The plant holobiont—an integrated unit of the host and its microbiome—has co-evolved through ecological and genetic interactions. Microbiome engi
academic.oup.com
August 4, 2025 at 9:15 AM
evolvedbiofilm.bsky.social
Dryland microbiomes reveal community adaptations to desertification and climate change

#ISMEJournal review by Claudia Coleine et al
with Laura Selbmann and Eleonora Egidi

academic.oup.com/ismej/advanc...
March 30, 2024 at 7:16 AM
evolvedbiofilm.bsky.social
Highly relevant #ISMEJournal review for the SynCom enthusiasts by Jiayi Jing, Paolina Garbeva, Jos Raaijmakers and @marnixmedema.bsky.social

Strategies for tailoring functional microbial synthetic communities

academic.oup.com/ismej/advanc...
March 29, 2024 at 9:44 AM
gibbological.bsky.social
Colonization resistance in the gut: do commensal microbes represent a third branch of our immune system? @ISMEJournal <a href="http://www.nature.com/ismej/journal/v8/n3/abs/ismej2013172a.html?WT.ec_id=ISMEJ-201403" class="hover:underline text-blue-600 dark:text-sky-400 no-card-link" target="_blank" rel="noopener" data-link="bsky">http://www.nature.com/ismej/journal/v8/n3/abs/ismej2013172a.html?WT.ec_id=ISMEJ-201403
The social structure of microbial community involved in c...
It is well established that host-associated microbial com...
www.nature.com
November 13, 2024 at 10:17 PM
evolvedbiofilm.bsky.social
Diversification of single-cell growth dynamics under starvation influences subsequent reproduction in a clonal bacterial population

-in #ISMEJournal

"growth of individual Escherichia coli cells in populations under fluctuating nutrient conditions"

academic.oup.com/ismej/advanc...
Diversification of single-cell growth dynamics under starvation influences subsequent reproduction in a clonal bacterial population
Abstract. Most of the microbes in nature infrequently receive nutrients and are thus in slow- or non-growing states. How quickly they can resume their grow
academic.oup.com
December 30, 2024 at 12:19 PM
evolvedbiofilm.bsky.social
Habitat filtering more than microbiota origin controls microbiome transplant outcomes in soil

#ISMEJournal by Senka Causevic et al from Jan Roelof van der Meer at @dmf-unil.bsky.social

academic.oup.com/ismej/advanc...
Habitat filtering more than microbiota origin controls microbiome transplant outcomes in soil
Abstract. Human activities cause a global loss of soil microbiome diversity and functionality. One way to reverse this trend is through microbiota transpla
academic.oup.com
August 4, 2025 at 9:13 AM
evolvedbiofilm.bsky.social
Yicen Lin, Kunming University of Science and Technology
Synergistic biodegradation of polyethylene by experimentally evolved bacterial biofilms

Yicen presents the new paper in #ISMEJournal
academic.oup.com/ismej/advanc...

A collaboration between our labs

#BGIspatialmicrobiome
October 22, 2025 at 8:46 AM
evolvedbiofilm.bsky.social
Mechanisms and implications of bacterial-fungal competition for soil resources

#ISMEJournal by Chaoqun Wang and Yakov Kuzyakov

academic.oup.com/ismej/advanc...
Mechanisms and implications of bacterial-fungal competition for soil resources
Abstract. Elucidating complex interactions between bacteria and fungi that determine microbial community structure, composition, and functions in soil, as
academic.oup.com
May 2, 2024 at 1:15 PM
wheatpath.bsky.social
Jour#4 @libe @_ajspi : première contribution au #Direct @libe (on fait ce qu'on peut 😋), avec "L'intensification des systèmes de cultures diminue la qualité des interactions microbiennes dans les sols", faisant référence à un article @ISMEJournal

liberation.fr/direct/element…
January 9, 2025 at 6:52 PM
evolvedbiofilm.bsky.social
Eli is presenting their #ISMEJournal paper published recently:
academic.oup.com/ismej/articl...

Salmonella and sporulation impairment in B.subtilis, the role of SigB sigma factor
#BACELL2025
Bacillus subtilis ensures high spore quality in competition with Salmonella Typhimurium via the SigB-dependent pathway
Abstract. The interactions between beneficial bacteria and pathogens are understudied. Here we investigate the interactions between the probiotic strain Ba
academic.oup.com
June 17, 2025 at 9:07 AM
evolvedbiofilm.bsky.social
Chemotaxis, growth, and inter-species interactions shape early bacterial community assembly

#ISMEJournal from Roman Stocker, Mary Ann Moran labs

academic.oup.com/ismej/advanc...
Validate User
academic.oup.com
May 31, 2025 at 8:21 AM
evolvedbiofilm.bsky.social
On extreme hot summer and soil warming - which factors needed for survival (including spore related genes increased), also nitrogen cycle change
meta-genome/-transcriptome = NH4-ox archaea

See their #ISMEJournal papers
academic.oup.com/ismej/articl...
&
academic.oup.com/ismej/articl...

#NIME2025
Extreme summers impact cropland and grassland soil microbiomes
AbstractThe increasing frequency of extreme weather events highlights the need to understand how soil microbiomes respond to such disturbances. Here, metag
academic.oup.com
October 7, 2025 at 7:59 AM
evolvedbiofilm.bsky.social
Metabolite cross-feeding enables concomitant catabolism of chlorinated methanes and chlorinated ethenes in synthetic microbial assemblies

-in #ISMEJournal

academic.oup.com/ismej/advanc...
Metabolite cross-feeding enables concomitant catabolism of chlorinated methanes and chlorinated ethenes in synthetic microbial assemblies
Abstract. Isolate studies have been a cornerstone for unravelling metabolic pathways and phenotypical (functional) features. Biogeochemical processes in na
academic.oup.com
June 1, 2024 at 9:11 AM
evolvedbiofilm.bsky.social
Depletion of protective microbiota promotes the incidence of fruit disease
-in #ISMEJournal
academic.oup.com/ismej/advanc...
Depletion of protective microbiota promotes the incidence of fruit disease
Abstract. Plant-associated microbiomes play important roles in plant health and productivity. However, despite fruits being directly linked to plant produc
academic.oup.com
May 2, 2024 at 1:13 PM