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evolvedbiofilm.bsky.social
Prophage induction drives soybean rhizobacterial community differentiation and nutrient cycling benefiting root development

-in #ISMEComms
with @bedutilh.bsky.social

academic.oup.com/ismecommun/a...
Prophage induction drives soybean rhizobacterial community differentiation and nutrient cycling benefiting root development
Abstract. Bacteriophages, lytic or lysogenic, play critical roles in structuring different soil bacteriomes and driving their functionality. Lysogeny is fa
academic.oup.com
November 9, 2025 at 11:36 AM
evolvedbiofilm.bsky.social
Plant miRNAs influence soil bacterial growth and amino acid uptake, restructuring community composition

-in #ISMEComms

academic.oup.com/ismecommun/a...
Plant miRNAs influence soil bacterial growth and amino acid uptake, restructuring community composition
Abstract. Plants and microbes use many strategies to acquire soil amino acids. Recent findings suggest that genes related to amino acid metabolism and tran
academic.oup.com
November 9, 2025 at 11:33 AM
evolvedbiofilm.bsky.social
Multi-kingdom microbial assemblage modulates its metabolism under contrasted cloud conditions

basidiomycetous yeast (Dioszegia hungarica) and 3 bacterial strains (Rhodococcus enclensis, Pseudomonas syringae and P. graminis) in synthetic cloud water

#ISMEComms

academic.oup.com/ismecommun/a...
Multi-kingdom microbial assemblage modulates its metabolism under contrasted cloud conditions
Abstract. Microorganisms maintain metabolic activity in clouds, with recognized impacts on the chemistry of small organic compounds, radicals and their pre
academic.oup.com
November 4, 2025 at 7:47 AM
evolvedbiofilm.bsky.social
Microorganisms in the phyllosphere of Norway spruce controlling nitrous oxide dynamics

#ISMEComms

academic.oup.com/ismecommun/a...
Microorganisms in the phyllosphere of Norway spruce controlling nitrous oxide dynamics
Abstract. Current climate change assessments and greenhouse gas (GHG) flux models often lack information on the microbiological processes that consume atmo
academic.oup.com
November 4, 2025 at 7:45 AM
evolvedbiofilm.bsky.social
Quorum sensing regulates a polysaccharide biosynthesis gene to control cell aggregation in Paracoccus denitrifican

in #ISMEComms

academic.oup.com/ismecommun/a...
Quorum sensing regulates a polysaccharide biosynthesis gene to control cell aggregation in Paracoccus denitrificans
Abstract. Most biofilm research has centered on a few motile model organisms that form thick biofilms. During dispersal, motile bacteria actively escape th
academic.oup.com
November 1, 2025 at 11:45 AM
manudelbaq.bsky.social
New @ISMEComms @BioFunLab

Native edaphoclimatic regions shape soil communities of crop wild progenitors

academic.oup.com/ismecommun/a...

Led by MJFernández-Alonso w/ @RubenMilla, @pablogarciapal.bsky.social, @YGZHURCEES, @BrajeshKSingh @PankajTrivedi Miguel de Celis and +

@irnase.bsky.social
October 13, 2025 at 8:16 AM
paulsheridan.bsky.social
Excited to share our new paper in @ISMEComms on recovering genomes from low-abundance microbes using GC-fractionation🦠

With @micecoevo.bsky.social @tweethinking.bsky.social @uniofgalway.bsky.social
academic.oup.com/ismecommun/a...
Genomic recovery from rare terrestrial microbes enabled by DNA-based GC-fractionation
Abstract. Genome reconstruction from metagenomic samples has dramatically increased our understanding of uncultivated lineages of life. However, untargeted
academic.oup.com
October 1, 2025 at 11:56 AM
evolvedbiofilm.bsky.social
FISH-FACS Proteomics: Enhanced label-free quantitative proteome analysis from low cell numbers of uncultured environmental microorganisms

#ISMEComms from Dörte Becher

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FISH-FACS Proteomics: Enhanced label-free quantitative proteome analysis from low cell numbers of uncultured environmental microorganisms
Abstract. Metaproteomics is an essential approach to analyse the in situ metabolic activity of microbes across various environments. In such highly diverse
academic.oup.com
August 30, 2025 at 9:39 AM
evolvedbiofilm.bsky.social
Increased host diversity limits bacterial generalism but may promote microbe-microbe interactions

in #ISMEComms

"patterns of diversity and specialization in the cloacal microbiomes of reptile communities from the temperate zone to the tropics"

academic.oup.com/ismecommun/a...
Increased host diversity limits bacterial generalism but may promote microbe-microbe interactions
Abstract. Host-associated bacteria vary in the number of host species they occupy. By colonizing many host species, host generalists can have disproportion
academic.oup.com
August 30, 2025 at 9:37 AM
evolvedbiofilm.bsky.social
Increased host diversity limits bacterial generalism but may promote microbe-microbe interactions

#ISMEComms

academic.oup.com/ismecommun/a...
Increased host diversity limits bacterial generalism but may promote microbe-microbe interactions
Abstract. Host-associated bacteria vary in the number of host species they occupy. By colonizing many host species, host generalists can have disproportion
academic.oup.com
August 25, 2025 at 10:58 AM
evolvedbiofilm.bsky.social
Ecological design of high-performance synthetic microbial communities: from theoretical foundations to functional optimization

#SynCom

in #ISMEComms

academic.oup.com/ismecommun/a...
Ecological design of high-performance synthetic microbial communities: from theoretical foundations to functional optimization
Abstract. The complexity of natural microbial communities poses significant challenges for predictive manipulation, driving the emergence of Synthetic Micr
academic.oup.com
August 25, 2025 at 7:54 AM
evolvedbiofilm.bsky.social
Higher-order microbial interactions revealed by comparative metabolic modeling of synthetic communities with varying species composition

#ISMEComms

academic.oup.com/ismecommun/a...
Higher-order microbial interactions revealed by comparative metabolic modeling of synthetic communities with varying species composition
Abstract. Understanding how microbial interactions scale with community complexity is key for microbiome engineering and ecological theory. This study inve
academic.oup.com
August 17, 2025 at 9:00 AM
evolvedbiofilm.bsky.social
SynCom perspective review on agri-food production systems - #ISMEComms

Rationally designed microbial communities in agri-food production systems: From research to market

academic.oup.com/ismecommun/a...
Rationally designed microbial communities in agri-food production systems: From research to market
Abstract. Primary production needs to transition towards more sustainable systems that reduce environmental impact, mitigate climate change, and ensure hea
academic.oup.com
July 29, 2025 at 2:36 PM
evolvedbiofilm.bsky.social
Microbiome data: tell me which metrics and I will tell you which communities

in #ISMEComms

academic.oup.com/ismecommun/a...
Microbiome data: tell me which metrics and I will tell you which communities
Abstract. In microbial community studies, analyzing diversity is crucial for uncovering ecological complexity. However, the intrinsic characteristics of Ne
academic.oup.com
July 29, 2025 at 2:31 PM
evolvedbiofilm.bsky.social
Harnessing the phyllosphere microbiota of wild foxtail millet for designing beneficial cross-kingdom synthetic communities

#ISMEComms by Xiaoyu Zai et al
with @cmelkonian.bsky.social @vivianecordovez.bsky.social @marnixmedema.bsky.social

academic.oup.com/ismecommun/a...
Harnessing the phyllosphere microbiota of wild foxtail millet for designing beneficial cross-kingdom synthetic communities
Abstract. Understanding the interplay between mechanisms in plant microbiome assembly and functioning of wild ancestors has led to the proposal of a novel
academic.oup.com
July 28, 2025 at 2:13 PM
evolvedbiofilm.bsky.social
Expanding ISME communications to taxonomy and nomenclature

#ISMEComms Editorial by Maria Chuvochina, Marike Palmer, and Stephanus N Venter

academic.oup.com/ismecommun/a...
Expanding ISME communications to taxonomy and nomenclature
Maria Chuvochina, Marike Palmer, Stephanus N Venter; Expanding ISME communications to taxonomy and nomenclature, ISME Communications, , ycaf106, https://do
academic.oup.com
June 30, 2025 at 5:17 PM
evolvedbiofilm.bsky.social
Tailocin Tail Fiber Diversity Correlates with rfbD Variation in the Pseudomonas syringae Species Complex

#ISMEComms from @stl.bsky.social
@hockettlab.bsky.social @surtlab.bsky.social

academic.oup.com/ismecommun/a...
Tailocin Tail Fiber Diversity Correlates with rfbD Variation in the Pseudomonas syringae Species Complex
Abstract. Community assembly dynamics are in part driven by competition between community members. Diverse bacteria can antagonize competitors through the
academic.oup.com
June 21, 2025 at 9:34 AM
evolvedbiofilm.bsky.social
Potential mode of action of multispecies inoculums on wheat growth under water stress

#ISMEComms from Étienne Yergeau

academic.oup.com/ismecommun/a...
Validate User
academic.oup.com
June 21, 2025 at 9:31 AM
evolvedbiofilm.bsky.social
Phages indirectly maintain tomato plant pathogen defense through regulation of the commensal microbiome

#ISMEComms by Reena Debray, @planetazor.bsky.social and @bkoskella.bsky.social

academic.oup.com/ismecommun/a...
Phages indirectly maintain tomato plant pathogen defense through regulation of the commensal microbiome
Abstract. As parasites of bacteria, phages can regulate microbiome diversity and composition and may therefore affect susceptibility to pathogens and disea
academic.oup.com
April 18, 2025 at 7:35 AM
evolvedbiofilm.bsky.social
A new role for an old actor: plant small RNAs orchestrate the phytobiome

-in #ISMEComms

academic.oup.com/ismecommun/a...
A new role for an old actor: plant small RNAs orchestrate the phytobiome
Seonghan Jang, Choong-Min Ryu; A new role for an old actor: plant small RNAs orchestrate the phytobiome, ISME Communications, , ycaf060, https://doi.org/10
academic.oup.com
April 14, 2025 at 6:00 PM
evolvedbiofilm.bsky.social
Evaporation controls contact-dependent bacterial killing during surface-associated growth

#T6SS #CoffeeRingEffect #Vcholerae

#ISMEComms by Miao Han, Chujin Ruan, Gang Wang, David R Johnson at @eawag.bsky.social and China Agricultural University

academic.oup.com/ismecommun/a...
Evaporation controls contact-dependent bacterial killing during surface-associated growth
Abstract. Many bacteria employ contact-dependent killing mechanisms, which require direct physical contact with a target cell, to gain an advantage over co
academic.oup.com
March 22, 2025 at 9:27 AM
evolvedbiofilm.bsky.social
Daily microbial rhythms of the surface ocean interrupted by the new moon- a lipidomic study
-in #ISMEComms
academic.oup.com/ismecommun/a...

"strong diel signal with a drawdown of lipids at night and an increase during the day"
Daily microbial rhythms of the surface ocean interrupted by the new moon- a lipidomic study
Abstract. Lipids are essential biomolecules for cell physiology and are commonly used as biomarkers to elucidate biogeochemical processes over a large rang
academic.oup.com
March 18, 2025 at 7:40 PM
evolvedbiofilm.bsky.social
Warming stimulates cellulose decomposition by recruiting phylogenetically diverse but functionally similar microorganisms

-in #ISMEComms

academic.oup.com/ismecommun/a...
Warming stimulates cellulose decomposition by recruiting phylogenetically diverse but functionally similar microorganisms
Abstract. Cellulose is the most abundant component of plant litter, which is critical for terrestrial carbon cycling. Nonetheless, it remains unknown how g
academic.oup.com
March 5, 2025 at 3:05 PM
evolvedbiofilm.bsky.social
Estimates of microbial community stability using relative invader growth rates are robust across levels of invader species richness

#ISMEComms by @mcastd.bsky.social, @padpadpadpad.bsky.social and Angus Buckling

academic.oup.com/ismecommun/a...
Estimates of microbial community stability using relative invader growth rates are robust across levels of invader species richness
Abstract. A key feature of natural communities is that the species within them stably coexist. A common metric used to test community stability is the abil
academic.oup.com
March 3, 2025 at 12:33 PM
evolvedbiofilm.bsky.social
Agricultural practices and pollinators modulate the anthosphere microbiome

#ISMEComms from @sarahlebeer.bsky.social

academic.oup.com/ismecommun/a...
Agricultural practices and pollinators modulate the anthosphere microbiome
Abstract. The flower microbiome is pivotal in plant health, influencing reproductive success, fruit quality, and pathogen vulnerability. However, the impac
academic.oup.com
February 12, 2025 at 3:19 PM