Yoav Gilad
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ygilad.bsky.social
Yoav Gilad
@ygilad.bsky.social
Associate Dean for data science, and Professor of Medicine and Human Genetics at the University of Chicago.
As you can see I've been quite busy... 😀
October 29, 2025 at 11:47 PM
Reposted by Yoav Gilad
And to make this more concrete, here is a re-review we just got. The editor overruled this negative reviewer, who here is *lecturing us on the ethos of the journal*.

I've never met anyone in real life who holds this position with whom I can have an actual discussion. Always anonymous peer review.
October 28, 2025 at 7:15 PM
Sean, this will pass. Harvard will receive federal funds again. I believe that you seriously doubt that right now. I don't. My outlook does not diminish the current crisis whatsoever, of course.
October 22, 2025 at 2:58 PM
If you believe that, indeed the decision makes sense. In fact, it would be just the first step in a process of shutting down research altogether.
October 22, 2025 at 2:34 PM
but do you still need an R01 from NIGMS to be eligible for a new MIRA, or was that requirement dropped?
September 30, 2025 at 3:55 PM
The enrichment results are a bit more nuanced. I am hoping the paper is doing a decent job explaining it.

No need for 'nearest gene' because we map the eQTLs...
July 19, 2025 at 1:13 PM
In both cases you can estimate variance (2nd central moment) instead of mean, but it tells you different things -- convergence of response on the bulk case, and fidelity of response in the single cell case. Makes sense?
July 19, 2025 at 1:00 PM
Single-cell RNA-seq can capture variation in expression between cells within the same individual. This tells you how noisy or tightly regulated a gene is in a given context, but it is less about person-to-person differences.
July 19, 2025 at 1:00 PM
Good question. Bulk RNA-seq captures variation in gene expression between individuals. That includes genetic effects, environmental differences, and other factors that vary from person to person.
July 19, 2025 at 1:00 PM
So, since 2005, your work resulted in both mine and your promotions! 😀
July 8, 2025 at 6:21 PM
Congratulations! I'm just going to politely point out that neither have applied to work with us... 😉
July 2, 2025 at 8:03 PM