Yasin El Abiead
yelabiead.bsky.social
Yasin El Abiead
@yelabiead.bsky.social
Interested in metabolomics, metabolism, and how to get from the former to the latter
Hi Chris. So it would have to be high resolution and DDA data. The main idea here was to use environmental sample types for which we have exact coordinates. While most data we have up to this point are from environmental materials such as soil, wild animals would sure be interesting to add as well!
August 27, 2025 at 9:06 PM
Great, thank you! I assume the data are already on MassIVE then. Then we just have to make sure to get all relevant metadata into redu.gnps2.org/selection/
August 27, 2025 at 3:33 AM
Thank you for your interest! I have sent you an email and also turned private messages on here on bluesky for others.
August 27, 2025 at 12:20 AM
Reposted by Yasin El Abiead
Combining #rstats and #Python for #MassSpectrometry data analysis is the way to go!

github.com/rformassspec...

supports (for now) #matchms and #spectrum_utils #Python libraries
GitHub - rformassspectrometry/SpectriPy: Interfacing R's Spectra package with the Python world.
Interfacing R's Spectra package with the Python world. - rformassspectrometry/SpectriPy
github.com
June 26, 2025 at 3:56 PM
Hope it is helpful. Also happy to answer questions!
May 28, 2025 at 12:21 AM