@vagkaratzas.bsky.social
Bioinformatician | Software Engineer | Research Fellow
at EMBL-EBI
at EMBL-EBI
Reposted
🧑💻 Need help with #nfcore #nextflow #bioinformatics pipelines, running or developing?
We are merging the 🌍 Eur/M.E./Afr and the 🌎 Americas weekly helpdesk.
Please join our host @vagkaratzas.bsky.social, nf-core maintainer, this Thursday at 14:30 CET | 08:30 ET on play.workadventu.re/@/nf-core/nf...
We are merging the 🌍 Eur/M.E./Afr and the 🌎 Americas weekly helpdesk.
Please join our host @vagkaratzas.bsky.social, nf-core maintainer, this Thursday at 14:30 CET | 08:30 ET on play.workadventu.re/@/nf-core/nf...
November 25, 2025 at 11:07 AM
🧑💻 Need help with #nfcore #nextflow #bioinformatics pipelines, running or developing?
We are merging the 🌍 Eur/M.E./Afr and the 🌎 Americas weekly helpdesk.
Please join our host @vagkaratzas.bsky.social, nf-core maintainer, this Thursday at 14:30 CET | 08:30 ET on play.workadventu.re/@/nf-core/nf...
We are merging the 🌍 Eur/M.E./Afr and the 🌎 Americas weekly helpdesk.
Please join our host @vagkaratzas.bsky.social, nf-core maintainer, this Thursday at 14:30 CET | 08:30 ET on play.workadventu.re/@/nf-core/nf...
Reposted
Pipeline release! nf-core/proteinfamilies v2.0.0 - Tin Shark!
Please see the changelog: github.com/nf-core/prot...
Please see the changelog: github.com/nf-core/prot...
Release Tin Shark · nf-core/proteinfamilies
Added
#124
Added new subworkflow MERGE_FAMILIES that can optionally merge similar (but not redundant) generated protein families. (by @vagkaratzas)
Added new functionality to the local module IDE...
github.com
November 6, 2025 at 11:13 AM
Pipeline release! nf-core/proteinfamilies v2.0.0 - Tin Shark!
Please see the changelog: github.com/nf-core/prot...
Please see the changelog: github.com/nf-core/prot...
Reposted
The genome catalogue for the soil microbiome is now live on MGnify! Built from MAGs & isolate genomes across 21 studies (including the recently published SMAG and Microflora Danica catalogues), it features 19,472 species.
MGnify - EBI
www.ebi.ac.uk
July 17, 2025 at 11:20 AM
The genome catalogue for the soil microbiome is now live on MGnify! Built from MAGs & isolate genomes across 21 studies (including the recently published SMAG and Microflora Danica catalogues), it features 19,472 species.
Reposted
It’s #WorldMicrobiomeDay! This year’s theme is Microbiome 101: What You Need to Know — here we present MGnify’s guide to microbiome data! 🔬
June 27, 2025 at 1:46 PM
It’s #WorldMicrobiomeDay! This year’s theme is Microbiome 101: What You Need to Know — here we present MGnify’s guide to microbiome data! 🔬
Reposted
Pipeline release! nf-core/proteinfamilies v1.0.0 - Iron Rhinoceros!
Please see the changelog: https://github.com/nf-core/proteinfamilies/releases/tag/1.0.0
Please see the changelog: https://github.com/nf-core/proteinfamilies/releases/tag/1.0.0
February 5, 2025 at 6:21 PM
Pipeline release! nf-core/proteinfamilies v1.0.0 - Iron Rhinoceros!
Please see the changelog: https://github.com/nf-core/proteinfamilies/releases/tag/1.0.0
Please see the changelog: https://github.com/nf-core/proteinfamilies/releases/tag/1.0.0