Taylor Salo
@tsalo.bsky.social
Software developer at UPenn. I develop tools for processing and analyzing fMRI and ASL data.
Reposted by Taylor Salo
🧠I am excited to announce that our manuscript introducing a new data resource – PennLEAD (Penn Longitudinal Executive functioning in Adolescent Development) – is now available on bioRxiv. Below are some details highlighting our data resource🧵funded by NIMH R01MH113550
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
November 12, 2025 at 9:53 PM
🧠I am excited to announce that our manuscript introducing a new data resource – PennLEAD (Penn Longitudinal Executive functioning in Adolescent Development) – is now available on bioRxiv. Below are some details highlighting our data resource🧵funded by NIMH R01MH113550
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
Reposted by Taylor Salo
An Open, Fully-processed, Longitudinal Data Resource to Study Brain Development and Transdiagnostic Executive Function https://www.biorxiv.org/content/10.1101/2025.11.10.687633v1
November 12, 2025 at 8:15 PM
An Open, Fully-processed, Longitudinal Data Resource to Study Brain Development and Transdiagnostic Executive Function https://www.biorxiv.org/content/10.1101/2025.11.10.687633v1
Reposted by Taylor Salo
Truly heroic work by the stellar @cieslakmatt.bsky.social + the HBCD dMRI working group team. Refactored QSIPrep + QSIRecon is the result of nearly 3y of concerted development + testing. It will be a total workhorse for HBCD -- and almost any other dMRI scan. Check it out for your data!!!
After years of development and testing, we are happy to present our work in "Diffusion MRI Processing in the HEALthy Brain and Child Development Study: Innovations and Applications"! www.biorxiv.org/content/10.1.... A thread:
Diffusion MRI Processing in the HEALthy Brain and Child Development Study: Innovations and Applications
The landmark ongoing HEALthy Brain and Cognitive Development (HBCD) study will longitudinally chart brain development in a large sample (projected n=7,200) of infants through age 10 years with multimo...
www.biorxiv.org
November 12, 2025 at 2:18 PM
Truly heroic work by the stellar @cieslakmatt.bsky.social + the HBCD dMRI working group team. Refactored QSIPrep + QSIRecon is the result of nearly 3y of concerted development + testing. It will be a total workhorse for HBCD -- and almost any other dMRI scan. Check it out for your data!!!
Reposted by Taylor Salo
QSIPrep and QSIRecon are usable beyond HBCD. Code, containers, and documentation are openly available. github.com/PennLINC/qsi..., github.com/PennLINC/qsi...
GitHub - PennLINC/qsiprep: Preprocessing of diffusion MRI
Preprocessing of diffusion MRI. Contribute to PennLINC/qsiprep development by creating an account on GitHub.
github.com
November 11, 2025 at 10:03 PM
QSIPrep and QSIRecon are usable beyond HBCD. Code, containers, and documentation are openly available. github.com/PennLINC/qsi..., github.com/PennLINC/qsi...
Reposted by Taylor Salo
After years of development and testing, we are happy to present our work in "Diffusion MRI Processing in the HEALthy Brain and Child Development Study: Innovations and Applications"! www.biorxiv.org/content/10.1.... A thread:
Diffusion MRI Processing in the HEALthy Brain and Child Development Study: Innovations and Applications
The landmark ongoing HEALthy Brain and Cognitive Development (HBCD) study will longitudinally chart brain development in a large sample (projected n=7,200) of infants through age 10 years with multimo...
www.biorxiv.org
November 11, 2025 at 10:03 PM
After years of development and testing, we are happy to present our work in "Diffusion MRI Processing in the HEALthy Brain and Child Development Study: Innovations and Applications"! www.biorxiv.org/content/10.1.... A thread:
Reposted by Taylor Salo
New layer-fMRI preprint using deep sampling to track face information across layers in FFA.
50 times 15 min scanning with whole brain VASO and BOLD fMRI.
By Kenshu Koiso et al.
doi.org/10.1101/2025...
50 times 15 min scanning with whole brain VASO and BOLD fMRI.
By Kenshu Koiso et al.
doi.org/10.1101/2025...
November 7, 2025 at 5:57 PM
New layer-fMRI preprint using deep sampling to track face information across layers in FFA.
50 times 15 min scanning with whole brain VASO and BOLD fMRI.
By Kenshu Koiso et al.
doi.org/10.1101/2025...
50 times 15 min scanning with whole brain VASO and BOLD fMRI.
By Kenshu Koiso et al.
doi.org/10.1101/2025...
Reposted by Taylor Salo
🗳️ Polls are OPEN for the 2025 @BIDSCommunity Steering Group Election!
We're electing two new members to help guide the future of BIDS. 📊✨
If you're a contributor, check your inbox for your ballot (let us know if you have not received it). Voting closes October 31st!
👉 Review candidates:
We're electing two new members to help guide the future of BIDS. 📊✨
If you're a contributor, check your inbox for your ballot (let us know if you have not received it). Voting closes October 31st!
👉 Review candidates:
Voter Pamphlet 2025 - BIDS Election
Election Information Packet 2025 Steering Group Candidate Summaries Alessio Giacomel I am an early career researcher currently working at the University Hospital in Frankfurt am Main. My background is...
docs.google.com
October 20, 2025 at 4:11 PM
🗳️ Polls are OPEN for the 2025 @BIDSCommunity Steering Group Election!
We're electing two new members to help guide the future of BIDS. 📊✨
If you're a contributor, check your inbox for your ballot (let us know if you have not received it). Voting closes October 31st!
👉 Review candidates:
We're electing two new members to help guide the future of BIDS. 📊✨
If you're a contributor, check your inbox for your ballot (let us know if you have not received it). Voting closes October 31st!
👉 Review candidates:
Reposted by Taylor Salo
🎤 Calling Multi-Echo fMRI Researchers 🎤
Preparing for OHBM? Get expert feedback before the deadline! 🌟
Tedana devs will possibly host a multi-echo meeting on Dec 8th to make sure your abstract is perfect for submission.
Interested? DM me or other tedana devs!
#neuroskyence #neuroimaging
Preparing for OHBM? Get expert feedback before the deadline! 🌟
Tedana devs will possibly host a multi-echo meeting on Dec 8th to make sure your abstract is perfect for submission.
Interested? DM me or other tedana devs!
#neuroskyence #neuroimaging
October 16, 2025 at 4:14 PM
🎤 Calling Multi-Echo fMRI Researchers 🎤
Preparing for OHBM? Get expert feedback before the deadline! 🌟
Tedana devs will possibly host a multi-echo meeting on Dec 8th to make sure your abstract is perfect for submission.
Interested? DM me or other tedana devs!
#neuroskyence #neuroimaging
Preparing for OHBM? Get expert feedback before the deadline! 🌟
Tedana devs will possibly host a multi-echo meeting on Dec 8th to make sure your abstract is perfect for submission.
Interested? DM me or other tedana devs!
#neuroskyence #neuroimaging
Reposted by Taylor Salo
We are pleased to announce that BIDS Extension Proposal 42 - Electromyogrpahy is open for community review!
github.com/bids-standar...
The review period is open from September 29 - October 10.
#bids #neuroimaging #electromyography #emg
github.com/bids-standar...
The review period is open from September 29 - October 10.
#bids #neuroimaging #electromyography #emg
Community Review: BEP042 - Electromyography (EMG) · bids-standard bids-specification · Discussion #2219
We are pleased to announce the community review period for BIDS Extension Proposal (BEP) 042! BEP042 extends the BIDS standard to include electromyography recordings. The draft specification may be...
github.com
September 29, 2025 at 2:05 PM
We are pleased to announce that BIDS Extension Proposal 42 - Electromyogrpahy is open for community review!
github.com/bids-standar...
The review period is open from September 29 - October 10.
#bids #neuroimaging #electromyography #emg
github.com/bids-standar...
The review period is open from September 29 - October 10.
#bids #neuroimaging #electromyography #emg
Reposted by Taylor Salo
We are pleased to announce that BIDS Extension Proposal 20 - Eye Tracking is open for community review!
github.com/bids-standar...
The review period is open from September 29 - October 10.
#bids #neuroimaging #eyetracking
github.com/bids-standar...
The review period is open from September 29 - October 10.
#bids #neuroimaging #eyetracking
Community Review: BEP020 - Eye Tracking · bids-standard bids-specification · Discussion #2218
We are pleased to announce the community review period for BIDS Extension Proposal (BEP) 020! BEP020 extends the BIDS standard to formally specify eye-tracking recordings, which has previously been...
github.com
September 29, 2025 at 2:04 PM
We are pleased to announce that BIDS Extension Proposal 20 - Eye Tracking is open for community review!
github.com/bids-standar...
The review period is open from September 29 - October 10.
#bids #neuroimaging #eyetracking
github.com/bids-standar...
The review period is open from September 29 - October 10.
#bids #neuroimaging #eyetracking
Reposted by Taylor Salo
I'm officially recruiting grad students in FIU's Cognitive Neuroscience PhD program! 🧠✨
The @bottenlab.bsky.social uses precision and population approaches to study neurodevelopmental variability. Reach out if interested! (contact info on bottenlab.github.io) Apps due 12/1! cn.fiu.edu
(pls share)
The @bottenlab.bsky.social uses precision and population approaches to study neurodevelopmental variability. Reach out if interested! (contact info on bottenlab.github.io) Apps due 12/1! cn.fiu.edu
(pls share)
The BottenLab
Endocrine & environmental influences on teen brain development
bottenlab.github.io
September 15, 2025 at 8:03 PM
I'm officially recruiting grad students in FIU's Cognitive Neuroscience PhD program! 🧠✨
The @bottenlab.bsky.social uses precision and population approaches to study neurodevelopmental variability. Reach out if interested! (contact info on bottenlab.github.io) Apps due 12/1! cn.fiu.edu
(pls share)
The @bottenlab.bsky.social uses precision and population approaches to study neurodevelopmental variability. Reach out if interested! (contact info on bottenlab.github.io) Apps due 12/1! cn.fiu.edu
(pls share)
Reposted by Taylor Salo
New Open dataset alert:
🧠 Introducing "Spacetop" – a massive multimodal fMRI dataset that bridges naturalistic and experimental neuroscience!
N = 101 x 6 hours each = 606 functional iso-hours combining movies, pain, faces, theory-of-mind and other cognitive tasks!
🧵below
🧠 Introducing "Spacetop" – a massive multimodal fMRI dataset that bridges naturalistic and experimental neuroscience!
N = 101 x 6 hours each = 606 functional iso-hours combining movies, pain, faces, theory-of-mind and other cognitive tasks!
🧵below
September 4, 2025 at 7:21 PM
New Open dataset alert:
🧠 Introducing "Spacetop" – a massive multimodal fMRI dataset that bridges naturalistic and experimental neuroscience!
N = 101 x 6 hours each = 606 functional iso-hours combining movies, pain, faces, theory-of-mind and other cognitive tasks!
🧵below
🧠 Introducing "Spacetop" – a massive multimodal fMRI dataset that bridges naturalistic and experimental neuroscience!
N = 101 x 6 hours each = 606 functional iso-hours combining movies, pain, faces, theory-of-mind and other cognitive tasks!
🧵below
Reposted by Taylor Salo
@BIDSCommunity, it’s time to nominate 🏆and elect 🗳️two new Steering Group members! The nomination period opened on September 3rd and will close on Friday, September 19th at 11:59pm (Anywhere on Earth; UTC-12). 👉Nominate yourself here: forms.gle/vFNjKCNuP29L...
BIDS Steering Group nominations
Thank you for taking the time to nominate yourself to this position!
The BIDS Steering Group is responsible for approving and advancing BEPs through the BIDS standard process, as well as more general...
forms.gle
September 4, 2025 at 12:29 AM
@BIDSCommunity, it’s time to nominate 🏆and elect 🗳️two new Steering Group members! The nomination period opened on September 3rd and will close on Friday, September 19th at 11:59pm (Anywhere on Earth; UTC-12). 👉Nominate yourself here: forms.gle/vFNjKCNuP29L...
Reposted by Taylor Salo
BIDS v1.10.1 is released! This release includes a large number of minor improvements accumulated over the last year. See bids-specification.readthedocs.io/en/stable/CH... for a summary. #BIDS #BrainImagingDataStructure #neuroimaging #neuroinformatics
Brain Imaging Data Structure 1.10.1
bids-specification.readthedocs.io
September 3, 2025 at 4:27 PM
BIDS v1.10.1 is released! This release includes a large number of minor improvements accumulated over the last year. See bids-specification.readthedocs.io/en/stable/CH... for a summary. #BIDS #BrainImagingDataStructure #neuroimaging #neuroinformatics
Reposted by Taylor Salo
Excited to share our latest preprint: "Neurosynth Compose: A Web-Based Platform for Flexible and Reproducible Neuroimaging Meta-Analysis"
Here, we cover the why, what, and how of the next generation Neurosynth ecosystem for reproducible neuroimaging meta-analysis.
osf.io/preprints/os...
Here, we cover the why, what, and how of the next generation Neurosynth ecosystem for reproducible neuroimaging meta-analysis.
osf.io/preprints/os...
OSF
osf.io
July 9, 2025 at 6:20 PM
Excited to share our latest preprint: "Neurosynth Compose: A Web-Based Platform for Flexible and Reproducible Neuroimaging Meta-Analysis"
Here, we cover the why, what, and how of the next generation Neurosynth ecosystem for reproducible neuroimaging meta-analysis.
osf.io/preprints/os...
Here, we cover the why, what, and how of the next generation Neurosynth ecosystem for reproducible neuroimaging meta-analysis.
osf.io/preprints/os...
Reposted by Taylor Salo
How does the human brain coordinate hierarchical cortical development? Our work in Nature Neuroscience identifies a role for thalamocortical structural connectivity in the expression of hierarchical periods of cortical plasticity & environmental receptivity in youth 🧵 www.nature.com/articles/s41...
July 8, 2025 at 12:00 AM
How does the human brain coordinate hierarchical cortical development? Our work in Nature Neuroscience identifies a role for thalamocortical structural connectivity in the expression of hierarchical periods of cortical plasticity & environmental receptivity in youth 🧵 www.nature.com/articles/s41...
Reposted by Taylor Salo
Amelie Rauland (all star via IRTG student w/ @sbe.bsky.social ) will be presenting "Benchmarking Reconstruction Methods for Bundle Segmentation in Single-Shell dMRI" on Friday and Saturday, Poster #1283
June 25, 2025 at 7:24 AM
Amelie Rauland (all star via IRTG student w/ @sbe.bsky.social ) will be presenting "Benchmarking Reconstruction Methods for Bundle Segmentation in Single-Shell dMRI" on Friday and Saturday, Poster #1283
Reposted by Taylor Salo
@bencephalon.bsky.social from @aarona-b.bsky.social 's lab will be presenting "Integrating clinical and research imaging to uncover neuroanatomic deviations in 22q11.2 deletions" Wed, June 25, 13:15 -15:15 & Thurs, June 26, 13:45 -15:45; Poster #697
June 25, 2025 at 5:26 AM
@bencephalon.bsky.social from @aarona-b.bsky.social 's lab will be presenting "Integrating clinical and research imaging to uncover neuroanatomic deviations in 22q11.2 deletions" Wed, June 25, 13:15 -15:15 & Thurs, June 26, 13:45 -15:45; Poster #697
Reposted by Taylor Salo
@kevin-y-sun.bsky.social will be presenting his work on "Copy Number Variant Risk Scores Are Associated with Personalized Functional Brain Network Topography" Wed, June 25, 13:15 - 15:15 & Thus, June 26, 13:45 - 15:45
June 25, 2025 at 12:50 AM
@kevin-y-sun.bsky.social will be presenting his work on "Copy Number Variant Risk Scores Are Associated with Personalized Functional Brain Network Topography" Wed, June 25, 13:15 - 15:15 & Thus, June 26, 13:45 - 15:45
Reposted by Taylor Salo
@audreycluo.bsky.social will be presenting her fab work on "Two Axes of White Matter Development" on Wed, June 25, 13:15 -15:15 & Thurs, June 26, 13:45 -15:45; Poster #1010.
June 25, 2025 at 12:49 AM
@audreycluo.bsky.social will be presenting her fab work on "Two Axes of White Matter Development" on Wed, June 25, 13:15 -15:15 & Thurs, June 26, 13:45 -15:45; Poster #1010.
Reposted by Taylor Salo
Want more RBC? Come chat with me at the RBC poster Friday, Jun 27 & Saturday June 28: 13:45 – 15:45 PM; Poster #1816.
June 25, 2025 at 12:48 AM
Want more RBC? Come chat with me at the RBC poster Friday, Jun 27 & Saturday June 28: 13:45 – 15:45 PM; Poster #1816.
Reposted by Taylor Salo
I will provide a (poor) substitute for @goliashf.bsky.social and discuss Reproducible Brain Charts as part of the "OSR Table Talk on Recommended Practices in Open Science" Friday, June 27, from 8–9 AM in Exhibition Hall 1
June 25, 2025 at 12:46 AM
I will provide a (poor) substitute for @goliashf.bsky.social and discuss Reproducible Brain Charts as part of the "OSR Table Talk on Recommended Practices in Open Science" Friday, June 27, from 8–9 AM in Exhibition Hall 1
Reposted by Taylor Salo
@goliashf.bsky.social is ALSO presenting "Systematic dynamical profiling to discover and manipulate the dynamical regime of the primate brain" Thursday, Jun 26: 9:00 AM – 10:15 AM during the computational dynamics symposium in Room M2.
June 25, 2025 at 12:44 AM
@goliashf.bsky.social is ALSO presenting "Systematic dynamical profiling to discover and manipulate the dynamical regime of the primate brain" Thursday, Jun 26: 9:00 AM – 10:15 AM during the computational dynamics symposium in Room M2.
Reposted by Taylor Salo
@goliashf.bsky.social is presenting (via video, 🥲) "Reproducible Brain Charts: An Open Data Resource for Mapping the Developing Brain and Mental Health" on Friday, Jun 27: 11:30 AM – 12:45 PM. This talk is part the Neuroinformatics and Data Sharing session in Room M3 (Mezzanine Level).
June 25, 2025 at 12:41 AM
@goliashf.bsky.social is presenting (via video, 🥲) "Reproducible Brain Charts: An Open Data Resource for Mapping the Developing Brain and Mental Health" on Friday, Jun 27: 11:30 AM – 12:45 PM. This talk is part the Neuroinformatics and Data Sharing session in Room M3 (Mezzanine Level).
Reposted by Taylor Salo
@stevenmeisler.com is presenting "A quality-rated, analysis-ready release of 26,174 dMRI sessions from the ABCD Study" Friday / Saturday 1810. Wooo!!!!
June 25, 2025 at 12:39 AM
@stevenmeisler.com is presenting "A quality-rated, analysis-ready release of 26,174 dMRI sessions from the ABCD Study" Friday / Saturday 1810. Wooo!!!!