Thahmina A. Ali
@thahminaali.bsky.social
PhD student @ Tri-Institutional (Weill Cornell, MSK, Rockefeller) Computational Biology and Medicine (Tri-I CBM)
Reposted by Thahmina A. Ali
We are very excited to share the first preprint of a new direction for our group. Led by the fearless duo of @arthurwchow.bsky.social and @hoyinchu.bsky.social, our foray into computational protein design—
Sequence and structural determinants of efficacious de novo chimeric antigen receptors https://www.biorxiv.org/content/10.64898/2025.12.12.694033v1
December 14, 2025 at 10:38 AM
We are very excited to share the first preprint of a new direction for our group. Led by the fearless duo of @arthurwchow.bsky.social and @hoyinchu.bsky.social, our foray into computational protein design—
Reposted by Thahmina A. Ali
Introducing Spacelink, a unified framework for identifying and prioritizing spatially variable gene programs at tissue and cell type resolution and linking them to disease GWAS studies. Led by Hanbyul Lee & Haochen Sun www.biorxiv.org/content/10.1...
September 25, 2025 at 5:04 PM
Introducing Spacelink, a unified framework for identifying and prioritizing spatially variable gene programs at tissue and cell type resolution and linking them to disease GWAS studies. Led by Hanbyul Lee & Haochen Sun www.biorxiv.org/content/10.1...
Reposted by Thahmina A. Ali
Excited to share a new preprint from the lab with @ryandhindsa.bsky.social ! www.biorxiv.org/content/10.1...
Led by @sherrynyeo.bsky.social, @erinmayc.bsky.social, and friends, we continue our journey to find viral DNA in our favorite place-- the overlooked and discarded reads in existing data! 1/
Led by @sherrynyeo.bsky.social, @erinmayc.bsky.social, and friends, we continue our journey to find viral DNA in our favorite place-- the overlooked and discarded reads in existing data! 1/
July 22, 2025 at 9:59 PM
Excited to share a new preprint from the lab with @ryandhindsa.bsky.social ! www.biorxiv.org/content/10.1...
Led by @sherrynyeo.bsky.social, @erinmayc.bsky.social, and friends, we continue our journey to find viral DNA in our favorite place-- the overlooked and discarded reads in existing data! 1/
Led by @sherrynyeo.bsky.social, @erinmayc.bsky.social, and friends, we continue our journey to find viral DNA in our favorite place-- the overlooked and discarded reads in existing data! 1/
Reposted by Thahmina A. Ali
A consensus variant-to-function score to functionally prioritize variants for disease
www.biorxiv.org/content/10.1...
Great work by Kushal Dey's lab on an ensemble approach that integrates diverse V2F scores to prioritize causal variants in GWAS loci. #ENCODE4
www.biorxiv.org/content/10.1...
Great work by Kushal Dey's lab on an ensemble approach that integrates diverse V2F scores to prioritize causal variants in GWAS loci. #ENCODE4
A consensus variant-to-function score to functionally prioritize variants for disease
Identifying and functionally characterizing causal disease variants in genome-wide association studies remains a pressing challenge. Here, we construct a consensus variant-to-function (cV2F) score tha...
www.biorxiv.org
November 11, 2024 at 6:35 PM
A consensus variant-to-function score to functionally prioritize variants for disease
www.biorxiv.org/content/10.1...
Great work by Kushal Dey's lab on an ensemble approach that integrates diverse V2F scores to prioritize causal variants in GWAS loci. #ENCODE4
www.biorxiv.org/content/10.1...
Great work by Kushal Dey's lab on an ensemble approach that integrates diverse V2F scores to prioritize causal variants in GWAS loci. #ENCODE4