Tomochika Fujisawa
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t-fujisawa05.bsky.social
Tomochika Fujisawa
@t-fujisawa05.bsky.social
21 followers 37 following 12 posts
Researcher of bioinformatics and evolutionary biology. Center for data science, Shiga university, Japan
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Tomochika Fujisawa @t-fujisawa05.bsky.social · Oct 21
A new preprint about unknown detection for DNA barcoding. Unknown species are sometimes overlooked when you use short fragments.
www.biorxiv.org/content/10.1...
Performance and limitations of out-of-distribution detection for insect DNA (meta)barcoding
Successful applications of DNA barcoding/metabarcoding rely on the accurate taxonomic identification of sequence fragments. When biological surveys with DNA (meta)barcoding target underexplored biolog...
www.biorxiv.org
t-fujisawa05.bsky.social
Winter is very close.
December 1, 2025 at 5:01 AM
t-fujisawa05.bsky.social
A new preprint about unknown detection for DNA barcoding. Unknown species are sometimes overlooked when you use short fragments.
www.biorxiv.org/content/10.1...
Performance and limitations of out-of-distribution detection for insect DNA (meta)barcoding
Successful applications of DNA barcoding/metabarcoding rely on the accurate taxonomic identification of sequence fragments. When biological surveys with DNA (meta)barcoding target underexplored biolog...
www.biorxiv.org
October 21, 2025 at 5:54 AM
t-fujisawa05.bsky.social
Finally, we have autumn-like weather...
October 20, 2025 at 6:52 AM
t-fujisawa05.bsky.social
academic.oup.com/sysbio/advan...
Data Fusion for Integrative Species Identification Using Deep Learning
Abstract. DNA analyses have revolutionized species identification and taxonomic work. Yet, persistent challenges arise from little differentiation among an
academic.oup.com
October 17, 2025 at 4:59 AM
t-fujisawa05.bsky.social
onlinelibrary.wiley.com/doi/full/10....
Scaling Up Species Delimitation From DNA Barcodes to Whole Organelle Genomes: Strong Evidence for Discordance Among Genes and Methods for the Red Alga Dasyclonium
Molecular sequence data have become a ubiquitous tool for delimiting species and are particularly important in organisms where morphological traits are not informative about species boundaries. A ran....
onlinelibrary.wiley.com
July 8, 2025 at 4:08 AM
t-fujisawa05.bsky.social
onlinelibrary.wiley.com/doi/full/10....
Species Delimitation Using Genomic Data: Options and Limitations
The most effective approaches for species discovery and species validation with genomic data remain underexplored. This study evaluates the merits and limitations of phylogenetic approaches based on ...
onlinelibrary.wiley.com
May 1, 2025 at 5:26 AM
t-fujisawa05.bsky.social
arxiv.org/abs/2503.01691
Open-Set Recognition of Novel Species in Biodiversity Monitoring
Machine learning is increasingly being applied to facilitate long-term, large-scale biodiversity monitoring. With most species on Earth still undiscovered or poorly documented, species-recognition mod...
arxiv.org
April 18, 2025 at 2:50 AM
t-fujisawa05.bsky.social
Flowers are late this year...
April 15, 2025 at 2:41 AM