SIB Text Mining group
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SIB Text Mining group
@sib-text-mining.bsky.social
https://www.sib.swiss/patrick-ruch-group
https://bitem.hesge.ch/

#Bioinformatics #TrustworthyAI #Biodiversity #DataScience #Textmining
Reposted by SIB Text Mining group
📣 The call for tutorials & workshops at #ECCB2026 is now open! Share your tools, methods or expertise with the community.
🗓️ Deadline: 5 January 2026
👉 Submit: tinyurl.com/tw-eccb26

💡 ECCB will take place on 31 Aug–4 Sept in Geneva, gathering 1,000+ scientists from academia, industry, & healthcare.
November 3, 2025 at 8:09 AM
Revisiting on last month’s #SciDataCon2025 session co-chaired by Julien Gobeill and Wolmar Nyberg Åkerström on transforming supplementary data into FAIR datasets 🔍🔓🔗♻️
Such an important challenge for the community.
#FAIRdata #OpenScience
Julien Gobeill from SIB and Wolmar Nyberg Åkerström from @uu.se will co-chair a #SciDataCon2025 session on turning supplementary & generalist repository data into FAIR datasets on 14/10, 11:30am. Making hidden research data usable for all. 🔓📊

scidatacon.org/event/9/cont...

#FAIRdata #OpenScience
SciDataCon 2025
SciDataCon 2025 Programme Daily programme schedules for SciDataCon 2025 have been published. IDW 2025 full programme can be consulted at: https://idw2025.org/program-at-a-glance/ About SciDataCon SciD...
scidatacon.org
November 20, 2025 at 6:11 AM
Two weeks ago, Julien Knafou presented his work at #EMNLP2025 in Suzhou.
TransBERT is a framework for pre-training LM using synthetically translated text, and TransCorpus is our toolkit for creating large-scale translated corpora.
Try it here
huggingface.co/jknafou/Tran...
github.com/jknafou/Tran...
TransBERT: A Framework for Synthetic Translation in Domain-Specific Language Modeling
Julien Knafou, Luc Mottin, Anaïs Mottaz, Alexandre Flament, Patrick Ruch. Findings of the Association for Computational Linguistics: EMNLP 2025. 2025.
aclanthology.org
November 19, 2025 at 10:42 AM
The SIB TM group will attend the ELIXIR Data Platform at the Co-Located Event in Marseille (17–20 Nov 2025)! We look forward to discussions on curated data, FAIR practices, AI-ready datasets, and cross-platform collaboration in biomedical and biodiversity research.
elixir-europe.org/events/elixi...
ELIXIR Platforms co-located event - autumn 2025 | ELIXIR
elixir-europe.org
November 17, 2025 at 5:54 PM
Hello world! The SIB Text Mining Group just landed on Bluesky!
We process clinical, scientific and other types of documents to help biomedical / biodiversity experts make sense of complex information.
Expect smart search tools, data science, AI… and plenty of text wizardry 🧙‍♂️✨📝 Stay tuned!
November 17, 2025 at 5:33 PM