Yanliang Shi
shiyanliang.bsky.social
Yanliang Shi
@shiyanliang.bsky.social
Postdoc, Princeton Neuroscience Institute
Thank you so much! From the Allen Brain Cell atlas, we found cell types expressing Fezf1, Tfap2b, Nr5a1, Tph2, Hmx2, Grin2c, Foxa2, Six6, and Vgll2 have relatively larger contributions in predicting timescales, while multiple other genes also contribute. Still need to explore their functionality.
September 5, 2025 at 5:56 PM
8/8 We identified two potential network mechanisms for the universal scaling of intrinsic timescales across the mouse brain: fixed point dynamics operating near the edge of instability in linear networks, or chaotic dynamics in nonlinear networks with heavy-tailed connectivity.
September 2, 2025 at 2:59 PM
7/8 Across neurons, the diversity of timescales revealed a multiscale architecture, in which fast timescales determined regional differences in medians, while slow timescales universally followed a power-law distribution with an exponent near 2.
September 2, 2025 at 2:59 PM
6/8 We tested the relationship between timescales and gene expression profiles across the whole brain at fine spatial resolution. Spatial patterns of gene expression predicted timescale variation at a resolution finer than brain-area boundaries.
September 2, 2025 at 2:59 PM
5/8 Consistent with prior findings, median effective timescales were positively correlated with anatomical hierarchy scores in the cortex, but not in the thalamus.
September 2, 2025 at 2:59 PM
4/8 We compared effective timescales between selective and non-selective neurons in the IBL decision-making task. Neurons selective for choice or reward exhibited significantly longer timescales compared to their non-selective counterparts, but not for the visual stimulus.
September 2, 2025 at 2:59 PM
3/8 We generated a map of intrinsic timescales across the mouse brain. Median effective timescales varied widely across 223 brain areas, from tens of milliseconds to several seconds. They were up to fivefold longer in the midbrain and hindbrain than in the forebrain.
September 2, 2025 at 2:59 PM
2/8 To capture multiple timescales in single-neuron dynamics, we fitted their autocorrelations with linear mixtures of exponential decay functions, one for each timescale. We then defined an effective timescale to facilitate comparison across neurons with varying numbers of timescales.
September 2, 2025 at 2:59 PM
1/8 By analyzing brain-wide Neuropixels recordings from @intlbrainlab.bsky.social, we found that individual neurons exhibited diverse autocorrelation shapes both within and across brain areas, indicating diverse timescales across the brain.
September 2, 2025 at 2:59 PM