SequenceServer
sequenceserver.bsky.social
SequenceServer
@sequenceserver.bsky.social
Reposted by SequenceServer
Frustrating.
hopefully NIH will recover after the weekend 🤞

As a backup, our sequenceserver.com lets you run NCBI BLAST anytime - many PIs have an instance for their team.

(we created it to BLAST unpublished data, get prettier graphics that help interpretation, and improve collaboration)
Custom servers for BLAST search for your team and data
Run BLAST and interpret your custom data. Flexible BLAST visualization and output formats so you can focus on the science. Secure, private, and fast.
sequenceserver.com
March 2, 2025 at 7:38 AM
The season’s most romantic meet-cute mystery, how do gametes released into the environment recognize their own #species?🤔 New #research reveals #proteins on the unfertilized eggs might be key—at least in ribbon worms!🪱

👏 Congrats to the authors! Link👇

#science #marine #genetics #bioinformatics
December 17, 2024 at 11:16 AM
Will we ever stop celebrating #databases? Not likely! They offer high-quality #datasets to scientists worldwide.

Perfect example: Reefgenomics(.Org)🪸 Published in 2016, this #BLASTfromthePast is still being updated with #coral #genomes today! We're proud to be a part!

Links👇

#reef #marinescience
December 3, 2024 at 11:01 AM
You’ve heard of blue-blooded, but that pales (literally) in comparison to white-blooded icefishes 🐟, the only #vertebrates without #hemoglobin! 🩸 Shin et al., (with help from #SequenceServer!) reveal that #gene loss may be to blame. Congrats to the authors! 🎉

Link👇

#genomics
November 26, 2024 at 11:00 AM
Thanks to new #research on gars & bowfins, the evolution of #vertebrate #immune surveillance just got more garbled🐟Turns out these #fish have their own PSMB8 types, completely unique among vertebrates! Fascinating! 🧬

Congrats to the authors! Glad #SequenceServer could help!

Check out the paper 👇
November 19, 2024 at 11:02 AM
Open Sesame! 🪄 By now you know we love an open access #database! Well, SesamumGDB, the brand-new #genomic database for cultivated & wild #sesame #species, is here! 🌿
Plus, with #SequenceServer integration, you can #BLAST away to your heart’s content! 🧬 Link 👇
Happy BLASTing!
November 12, 2024 at 11:30 AM
🌻Sunflowers, 🥬lettuces, & 🫖chamomile: all from the #Asteraceae family, which covers 7% of flowering #plant diversity! This makes AMIR, a multi-omics #database with 74 species, 4.4M annotated #genes, & #SequenceServer BLAST capabilities, a huge deal!

Congrats Liu et al.

Links 👇
November 5, 2024 at 12:00 PM
🦠 K. pneumoniae, a key culprit for #septicemia & UTIs, showed increasing #antimicrobialresistance between 2019-2021 based on whole #genome sequencing by Gamaleldin et al. 🧬 Concerning, but work like this is crucial for tracking the rise in resistant #pathogens. Link 👇
October 29, 2024 at 12:00 PM
🦠 Bacteria-on-bacteria warfare in #milk might help treat Staph aureus & MRSA! 🥛Check out this #BLASTfromthePast where researchers isolate bacteriocins—bacteria's own bacteria-killing weapon—from bovine milk & test their inhibitory power on S. aureus and MRSA. Link👇
#genetics #bacteria #science
October 22, 2024 at 10:00 AM
Did you know?

Raphid #diatoms are one of the few eukaryotes that can glide! And they do it surprisingly... rap(h)idly! 🏎️ Congrats to Davutoglu et al. for their latest Nature #paper on the #molecular secrets behind this movement. Glad SequenceServer could help! 🌟

#genetics #science #research
October 10, 2024 at 10:30 AM
More exciting #genomics research to highlight, this time focusing on cactophilic flies that make their living in necrotic #cactus tissue (yum)! 🌵 Huge congrats to the authors 🎉 & delighted to see SequenceServer integrated into their publicly accessible #database. Check it out! (links in comments) 👇
September 24, 2024 at 10:18 AM
Struggling to decode your #blastn results? 🧬 SequenceServer has you covered! Our latest #blog is a step-by-step guide packed with handy examples to help you master blastn! Check it out (link in the comments).

Happy BLASTing!

#Bioinformatics #Genomics #BLAST #ResearchTips
September 10, 2024 at 10:00 AM
🚨 #BLASTfromthePast: Revisiting a truly enlightening study on the origins of firefly #bioluminescence. 🌟 Did fireflies and click #beetles share a glowing ancestor? Or did they #evolve it separately? Fascinating paper! Proud that #SequenceServer could play a part!
#genomics #genetics #bioinformatics
August 27, 2024 at 10:15 AM
🌱Peas are #plant protein powerhouses (phew, that's a lot of P's!), but their quality relies on sulfur availability. Bachelet et al., with the help of #SequenceServer, explore how #pea adapts to low-sulfur environments using #sulfate transporters.

Check out the paper (link👇)

#genomics #agronomy
August 20, 2024 at 10:15 AM
Whether you’re new to genome #annotation or a seasoned pro, SequenceServer cloud’s DNA visualizer simplifies the process to just copy, paste, click! 🧬Analyze BLAST hits, #plasmids & whole #genome features with informative visualizations!

Check out our blog for more info (link 👇)

Happy BLASTing!
August 13, 2024 at 10:16 AM
We love celebrating the incredible work of researchers worldwide & seeing SequenceServer’s impact! 🌟 One perfect example is van’t Hof et al., 2024, reporting a previously undescribed sex-determination mechanism in Lepidoptera! 🦋

Check out the paper using the link in the comments!

#genetics
July 16, 2024 at 10:45 AM
Every SequenceServer BLAST search now *also* includes independent domain results (from NCBI's Conserved Domain Database).🎉🎉🥳
November 20, 2023 at 2:20 PM