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seqfu.bsky.social
SeqFu · FASTX tools
@seqfu.bsky.social
33 followers 51 following 1 posts
Fast manipulation and inspection of FASTA and FASTQ files from the bioinformaticians at the Quadram Institute https://telatin.github.io/seqfu2/
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Reposted by SeqFu · FASTX tools
jimshaw.bsky.social
Announcing myloasm, a new long-read (ONT R10/PacBio) metagenome assembler that I've been working on during my postdoc in the Heng Li lab (@lh3lh3.bsky.social).

myloasm-docs.github.io
myloasm - metagenomic assembly with (noisy) long reads
myloasm-docs.github.io
May 28, 2025 at 5:54 PM
Reposted by SeqFu · FASTX tools
cyberciti.biz
Lmao 🤣 savages
March 27, 2025 at 6:39 AM
Reposted by SeqFu · FASTX tools
edmundmiller.dev
Pixi has shebang support like uv now! 😍
```
#!/usr/bin/env -S pixi exec --spec bat -- bash -e
```

pixi.sh/dev/advanced...
Shebang - Pixi by prefix.dev
None
pixi.sh
March 27, 2025 at 12:56 AM
Reposted by SeqFu · FASTX tools
quadraminstitute.bsky.social
Are you a forward-thinking scientist with expertise in bacterial foodborne pathogens or microbial spoilage? 🦠

Check out our current Group Leader vacancy ⤵️

💷 Competitive salary and support package
🗓️ Apply by 14 April 2025
➡️ buff.ly/ml6AT1G
Vacancy social card for a Group Leader position, seeking a scientist with a research focus on bacterial foodborne pathogens or microbial spoilage. Competitive salary and support package offered. Apply by 14 April 2025.
March 26, 2025 at 10:00 AM
seqfu.bsky.social
Did you know that you can have a quick peek at FASTQ qualities with `seqfu view`?

You can pipe it to less to scroll the whole dataset:

seqfu view FILE.fastq | less -SR

#seqfuTips #bioinformatics
Screenshot of the linux terminal running "seqfu view"
March 18, 2025 at 9:53 AM