Scott Berry
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scottbscience.bsky.social
Scott Berry
@scottbscience.bsky.social
Group leader at Single Molecule Science and UNSW RNA Institute at the University of New South Wales, Sydney. Interested in quantitative regulation of gene expression in single cells. Views my own. @scottbscience https://berrygroup.github.io
Oh! Would have been great to see you (I live in Wollongong now). But I am off to Korea tomorrow! Enjoy the gong. Hope the weather improves. 🤞
October 29, 2025 at 6:16 AM
Great list! Can I be added too please?
August 28, 2025 at 9:12 PM
December 12, 2024 at 5:38 AM
When both ARMC5 and INTS8 are depleted, excess Pol II is released into genes but often fails to transcribe the full transcription unit, resulting in major gene expression changes. There is lots more in the paper, of course!
December 12, 2024 at 5:38 AM
This finding pushed us to try to understand what stops Pol II from entering the elongation phase and actually making more RNA. We found that ARMC5 and Integrator phosphatase play complementary roles in this process.
December 12, 2024 at 5:38 AM
ARMC5 also regulates Pol II levels during normal cell growth - seemingly responsible for around half the cell’s Pol II turnover. But the extra Pol II that accumulates in cells upon ARMC5 loss doesn’t lead to more Pol II in gene bodies: it is mostly in the free pool or in the proximal promoter.
December 12, 2024 at 5:38 AM
However, using live-cell imaging and cellular fractionation, we found that this excess Pol II mostly accumulates off-chromatin.
December 12, 2024 at 5:38 AM
It has long been known that Pol II is degraded when transcription is inhibited - either with small molecules or if specific cofactors are depleted. We now know the ubiquitin ligase responsible is CUL3-ARMC5. When we remove ARMC5, Pol II is no longer lost upon inhibition.
December 12, 2024 at 5:38 AM
Building on our previous work on RNA concentration homeostasis doi.org/10.1016/j.ce..., we were interested to understand how global levels of Pol II are controlled. We teamed up with @anatv.bsky.social's lab who delve deep into mechanisms of ubiquitin-mediated regulation of the transcription cycle.
December 12, 2024 at 5:38 AM