Matt Paul
sciencematt.bsky.social
Matt Paul
@sciencematt.bsky.social
Bioinformatics Analyst at Rockefeller University
Working on all the fun genomics | Training and Reproducibility
Lead Developer of Bioconductor package Herper for managing conda in R
https://www.bioconductor.org/packages/release/bioc/html/Herper.html
I'm working on a Reproducibility course for Spring next year, so this has been great to see how we can frame it better to make it easier to understand its importance and the hang ups.
November 22, 2024 at 5:54 PM
A lot of people need more guidance on best practices from their lab and institute so that there's a coherent vision for provenance, and so it is less intimidating as an individual.
November 22, 2024 at 5:52 PM
I agree with a lot of folks. People don't have the bandwidth to build a good SOP which needs to operate on many levels with different tools i.e. data, package and code management. When you have limited time and training opportunities come up Reproducibility is a lot less exciting than scRNAseq
November 22, 2024 at 5:50 PM