Samuel BERTRAND
samuelbertrand.bsky.social
Samuel BERTRAND
@samuelbertrand.bsky.social
Metabolomics and bioinformatics to access novel natural products from fungal origin
Here is a new article about #MicrobialCoCulture: "Discovery of Cladoescherins, Unusual Hybrid Metabolites Derived from a Fungal PKS and a Bacterial NRPS by Co-cultivation" pubs.acs.org/doi/10.1021/...
Discovery of Cladoescherins, Unusual Hybrid Metabolites Derived from a Fungal PKS and a Bacterial NRPS by Co-cultivation
Two novel macrolide hybrids, cladoescherins A and B (1 and 2), and a rare macrolide dimer, dithiocladospolide (3), were identified from cocultures of Cladosporium sp. and Escherichia coli. Compounds 1...
pubs.acs.org
November 10, 2025 at 8:23 AM
Very happy to share the latest preprint from the #ANR: "Systematic sensitivity analyses of growth modelling to evaluate the robustness of Genome Scale Metabolic Network models — case study with the filamentous fungus Penicillium rubens" #ProudPI doi.org/10.1101/2025...
Systematic sensitivity analyses of growth modelling to evaluate the robustness of Genome Scale Metabolic Network models — case study with the filamentous fungus Penicillium rubens
The functionality—and thereby the quality—of a Genome Scale Metabolic Network (GSMN) model is commonly evaluated by using a biomass reaction as the objective function to determine flux distributions u...
doi.org
September 16, 2025 at 8:22 PM
Here is a new artical about #MicrobialCoCUlture: "Therapeutic Efficacy and Drug Metabolism of Griseorhodin A Induced by a Co-culture of #Actinomycete Strain TMPU-20A002 and #Mycobacterium smegmatis in Silkworm Infection Models" doi.org/10.1248/cpb....
Therapeutic Efficacy and Drug Metabolism of Griseorhodin A Induced by a Co-culture of Actinomycete Strain TMPU-20A002 and Mycobacterium smegmatis in S …
In screening for antibacterial agents from co-cultures of Mycobacterium smegmatis and microbial resources, such as actinomycetes and fungi, the known …
doi.org
September 15, 2025 at 8:02 PM
Here is a new article about #MicrobialCoCulture: "Metabolites Profiling and Bioactivity of #Aspergillus-#Penicillium Co-culture: Integrative GC-MS, LC-MS/MS, and in Silico Analysis for Targeting #Fusarium Proliferatum in Onion Basal Rot Biocontrol" link.springer.com/article/10.1...
Metabolites Profiling and Bioactivity of Aspergillus-Penicillium Co-culture: Integrative GC-MS, LC-MS/MS, and in Silico Analysis for Targeting Fusarium Proliferatum in Onion Basal Rot Biocontrol - Che...
Onion basal rot, caused mainly by the soil-borne fungus Fusarium proliferatum, is a serious and persistent disease affecting onion (Allium cepa L.) worldwide. It results in severe yield reductions, im...
link.springer.com
September 5, 2025 at 3:07 PM
A recent review about #MicrobialCoculture: "Expanding the frontiers of microbial biosynthesis with
synthetic microbial communities" www.sciencedirect.com/science/arti...
Expanding the frontiers of microbial biosynthesis with synthetic microbial communities
Advances in synthetic biology have extended microbial engineering to programmable microbial communities. Through rational pathway partitioning and wel…
www.sciencedirect.com
September 2, 2025 at 12:11 PM
Here is a new article about #CoCulture between fungal and mouse cells: "Host–Pathogen Interaction Activated Biosynthesis of Natural Products" pubs.acs.org/doi/10.1021/...
Host–Pathogen Interaction Activated Biosynthesis of Natural Products
The way immune cells attack pathogenic microorganisms might trigger pathogens to produce compounds that promote their survival. Based on this idea, we constructed a coculture system of pathogenic fungi and immune cells and isolated fumigatinolactone (1) as a new natural product by coculture of Aspergillus fumigatus IFM 60237 with RAW264 mouse macrophage-like cells. Fumigatinolactone (1) was produced via a nonenzymatic coupling reaction between fumigatin (4) and a new type of intermediate fumarylazlactone (5). An investigation of the interaction mechanism between the fungi and cells revealed that the survival interaction between pathogen and immune cells played key roles. Surprisingly, fungi showed a response to nitric oxide (NO), which was produced by macrophages, resulting in the production of 4. In addition, an iron starvation condition triggered the production of 5. Finally, 1 was obtained by these two mechanisms. Furthermore, compounds 1–4, particularly 4, showed inhibition of NO production from RAW264, which might be a defense action for macrophage by fungi. This is the first example of elucidation of interaction mechanisms between pathogen and immune cells for activation of silent genes to produce a new compound. These findings suggest that host–pathogen survival interaction may increase the production of secondary metabolites from fungi.
pubs.acs.org
September 1, 2025 at 11:10 AM
here is a new article about #MicrobialCoCulture: "Bioactive Spirocyclic C-Arylglycosides From the Fungal-Fungal Co-Culture of #Pestalotiopsis sp. and #Nigrospora sp." doi.org/10.1002/pca....
Bioactive Spirocyclic C‐Arylglycosides From the Fungal–Fungal Co‐Culture of Pestalotiopsis sp. and Nigrospora sp.
Two new papulacandin analogs (1–2), together with 12 known compounds (3–14), were identified from the co-culture of two endophytic fungi, Pestalotiopsis sp. J025 and Nigrospora sp. Wn-2-2, isolated f...
doi.org
September 1, 2025 at 10:56 AM
Here is the latest article I was involved in. "Integrating multi-level approaches to assess blue mussel (Mytilus spp.) responses to short-term temperature and salinity changes" www.sciencedirect.com/science/arti...
Integrating multi-level approaches to assess blue mussel (Mytilus spp.) responses to short-term temperature and salinity changes
Climate change is exacerbating temperature and salinity variations in marine ecosystems, thereby challenging the physiological resilience of bivalves …
www.sciencedirect.com
August 25, 2025 at 9:41 AM
a recent article about #MicrobialCoCulture: "Reverse chemical ecology to study the defense of the plant host #Sextonia rubra and the chemical mediators of its endophyte #Fusarium falciforme against phytopathogen #Trametes versicolor" www.sciencedirect.com/science/arti...
Reverse chemical ecology to study the defense of the plant host Sextonia rubra and the chemical mediators of its endophyte Fusarium falciforme against phytopathogen Trametes versicolor
Sextonia rubra is a tropical tree endemic to the Guiana Shield and the Brazilian Amazon. Despite its renowned wood durability, it remains susceptible …
www.sciencedirect.com
June 30, 2025 at 12:39 PM
Reposted by Samuel BERTRAND
📢 Appel à projets générique #AAPG 2025 : l’ANR publie les premières listes de projets sélectionnés dans le cadre de 21 comités d’évaluation.
anr.fr/fr/actualite...
June 27, 2025 at 1:34 PM
Reposted by Samuel BERTRAND
🌊 Du 16 au 26 juin, ATLASea débarque à la Station Marine d'Endoume !

Regardez trois interviews en direct sur IMBETV ! 🎥 : urls.fr/OTyHZV
🔹 Jeudi 19 juin à 18h30
🔹 Lundi 23 juin à 18h30
🔹 Jeudi 26 juin à 18h30

🎤 Posez vos questions en ligne pour échanger directement avec nos chercheu-r(-se)s !
ATLASea débarque à la Station Marine d’Endoume !
Du 16 au 26 juin, la Station Marine d’Endoume accueille les équipes du projet ATLASea, un ambitieux programme européen pour percer les secrets de la biodiver...
urls.fr
June 10, 2025 at 8:45 AM
Here is new acticle about #CoCulture between plant cells and a fungus: "Co-culture of Cajanus cajan (Linn.) Millsp. cell suspension cultures with an endophytic fungus for the enhanced production of pharmacologically active cajaninstilbene acid" link.springer.com/article/10.1...
Co-culture of Cajanus cajan (Linn.) Millsp. cell suspension cultures with an endophytic fungus for the enhanced production of pharmacologically active cajaninstilbene acid - Plant Cell, Tissue and Org...
Cajaninstilbene acid (CSA), a natural stilbene in Cajanus cajan (Linn.) Millsp., is highly appreciated for its remarkable bioactivities. This study aimed to enhance the CSA yield in C. cajan cell susp...
link.springer.com
May 5, 2025 at 3:19 PM
One recent article about #MicrobialCoCulture : "A New Azaphilone Derivative from the Co-culture of
#Aspergillus versicolor and #Aspergillus chevalieri" doi.org/10.25135/rnp...
doi.org
April 10, 2025 at 2:39 PM
very happy to share the latest publication I was involved in : "An exploratory study of species richness and dynamics in the cultivable mycobiota of #Palmaria palmata" doi.org/10.1016/j.fu...
https://doi.org/10.1016/j.fune…
March 10, 2025 at 11:54 AM
here is a new article about #MicrobialCoCulture : "Steroidal Adducts and Andrastin-type Meroterpenoids from the Co-culture of Two Isodon Species-Associated Endophytic Fungi" www.thieme-connect.de/products/ejo...
Steroidal Adducts and Andrastin-type Meroterpenoids from the Co-culture of Two Isodon Species-Associated Endophytic Fungi
Thieme E-Books & E-Journals
www.thieme-connect.de
February 3, 2025 at 2:14 PM
A recent article about #MicrobialCoCulture: "Crepidamycins A–E, pyranonaphthoquinones from endophytic #Streptomyces sp. MG-F-1 of #Dendrobium crepidatum by the co-culture strategy" doi.org/10.1016/j.ph...
Redirecting
doi.org
January 16, 2025 at 4:57 PM
First article of the year! « Assessment of the effects of cadmium, samarium and gadolinium on the blue mussel (Mytilus edulis): A biochemical, transcriptomic and metabolomic approach » www.sciencedirect.com/science/arti...
Assessment of the effects of cadmium, samarium and gadolinium on the blue mussel (Mytilus edulis): A biochemical, transcriptomic and metabolomic approach
Improving the understanding of how chemicals affect on organisms and assessing the associated environmental risks is of major interest in environmenta…
www.sciencedirect.com
January 13, 2025 at 5:42 PM
Reposted by Samuel BERTRAND
A great time with the rest of the board! Stay tuned for information on the new initiatives 🤙🏾
🚨 The RFMF Board of Directors met in Nantes on January 9th and 10th! 🚨

We worked for the community:

- > reviewing past actions ✅
-> planning new initiatives for 2025 🚀.

Stay tuned to follow our upcoming projects! ✨

#RFMF #Metabolomics #Fluxomics #Nantes
January 11, 2025 at 1:55 PM
Reposted by Samuel BERTRAND
The #RFMF wishes you a fantastic 2025 filled with exciting discoveries, fruitful collaborations, and inspiring scientific adventures. Let’s continue to strengthen our community and advance the fields of metabolomics and fluxomics together! 🚀
January 10, 2025 at 6:50 PM
Reposted by Samuel BERTRAND
🚨 The RFMF Board of Directors met in Nantes on January 9th and 10th! 🚨

We worked for the community:

- > reviewing past actions ✅
-> planning new initiatives for 2025 🚀.

Stay tuned to follow our upcoming projects! ✨

#RFMF #Metabolomics #Fluxomics #Nantes
January 10, 2025 at 5:21 PM
Reposted by Samuel BERTRAND
Very happy to introduce MS2DECIDE, a decision theory-based cheminformatics tools for NP prioritization from multiannotated MS/MS data. Have a look at our preprint
@ChemRxiv rb.gy/1qn6c6
@LAMSADEDauphine @Paris_Dauphine @BioCIS @UnivParisSaclay @cnrs.bsky.social
November 27, 2024 at 2:23 PM