@samsen06.bsky.social
Reposted
Presenting RABiTPy, a Python package for bacterial tracking that works in a jupyter notebook format for: video/image stack import and processing, AI-based or traditional cell segmentation, cell tracking, trajectory analysis, and downstream plotting
bmcbioinformatics.biomedcentral.com/articles/10....
bmcbioinformatics.biomedcentral.com/articles/10....
RABiTPy: an open-source Python software for rapid, AI-powered bacterial tracking and analysis - BMC Bioinformatics
Bacterial tracking is crucial for understanding the mechanisms governing motility, chemotaxis, cell division, biofilm formation, and pathogenesis. Although modern microscopy and computing have enabled...
bmcbioinformatics.biomedcentral.com
May 19, 2025 at 6:09 PM
Presenting RABiTPy, a Python package for bacterial tracking that works in a jupyter notebook format for: video/image stack import and processing, AI-based or traditional cell segmentation, cell tracking, trajectory analysis, and downstream plotting
bmcbioinformatics.biomedcentral.com/articles/10....
bmcbioinformatics.biomedcentral.com/articles/10....
Reposted
Congratulations to our 2nd year PhD student @samsen06.bsky.social for winning a Poster Award for Innovation in Environmental Solutions @ASUBiodesign annual retreat 👏🎊🥳
April 4, 2025 at 5:19 PM
Congratulations to our 2nd year PhD student @samsen06.bsky.social for winning a Poster Award for Innovation in Environmental Solutions @ASUBiodesign annual retreat 👏🎊🥳