Renaud Vitalis
@renaud-vitalis.bsky.social
Population geneticist at @inrae-france.bsky.social. Director of @cbgpmontpellier.bsky.social. Also on #Mastodon: @renaud_vitalis@ecoevo.social
Reposted by Renaud Vitalis
Happy to announce the release of version 3.0.0 of the R package poolfstat.
This new version features hierarchical F-statistics estimation and other new functions (e.g., to simulate Pool-Seq data or to perform genome-scans), along with significant performance improvements.
Feedback is welcome!
This new version features hierarchical F-statistics estimation and other new functions (e.g., to simulate Pool-Seq data or to perform genome-scans), along with significant performance improvements.
Feedback is welcome!
poolfstat: Computing f-Statistics and Building Admixture Graphs Based on Allele Count or Pool-Seq Read Count Data
Functions for the computation of F-, f- and D-statistics (e.g., Fst, hierarchical F-statistics, Patterson's F2, F3, F3*, F4 and D parameters) in population genomics studies from allele count or Pool-S...
cran.r-project.org
November 25, 2024 at 10:25 AM
Happy to announce the release of version 3.0.0 of the R package poolfstat.
This new version features hierarchical F-statistics estimation and other new functions (e.g., to simulate Pool-Seq data or to perform genome-scans), along with significant performance improvements.
Feedback is welcome!
This new version features hierarchical F-statistics estimation and other new functions (e.g., to simulate Pool-Seq data or to perform genome-scans), along with significant performance improvements.
Feedback is welcome!
Reposted by Renaud Vitalis
🚨 New Preprint Alert! 🚨
Happy to share our new preprint, "Estimating hierarchical F–statistics from Pool–Seq data", written with Marta Coronado-Zamora and Renaud Vitalis.
Feedback and discussions are most welcome! 🙌 #PopulationGenetics #Genomics #PoolSeq
Happy to share our new preprint, "Estimating hierarchical F–statistics from Pool–Seq data", written with Marta Coronado-Zamora and Renaud Vitalis.
Feedback and discussions are most welcome! 🙌 #PopulationGenetics #Genomics #PoolSeq
Estimating hierarchical F–statistics from Pool–Seq data
Introduced over seventy years ago, F-statistics have been and remain central to population and evolutionary genetics. Among them, FST is one of the most commonly used descriptive statistics in empiric...
doi.org
November 25, 2024 at 10:11 AM
🚨 New Preprint Alert! 🚨
Happy to share our new preprint, "Estimating hierarchical F–statistics from Pool–Seq data", written with Marta Coronado-Zamora and Renaud Vitalis.
Feedback and discussions are most welcome! 🙌 #PopulationGenetics #Genomics #PoolSeq
Happy to share our new preprint, "Estimating hierarchical F–statistics from Pool–Seq data", written with Marta Coronado-Zamora and Renaud Vitalis.
Feedback and discussions are most welcome! 🙌 #PopulationGenetics #Genomics #PoolSeq
Découvrez le métier de Julien Haran, entomologiste taxonomiste au @CBGPMontpellier @Cirad : via @YouTube
youtu.be/lqt5RXWReZI?fe…
youtu.be/lqt5RXWReZI?fe…
November 24, 2024 at 11:41 AM
Découvrez le métier de Julien Haran, entomologiste taxonomiste au @CBGPMontpellier @Cirad : via @YouTube
youtu.be/lqt5RXWReZI?fe…
youtu.be/lqt5RXWReZI?fe…
Félicitations à @FriedGuillaume, lauréat du prix Jean Dufrenoy pour ses travaux sur la flore des agrosystèmes et les plantes exotiques envahissantes !
academie-agriculture.fr/prix-medailles…
academie-agriculture.fr/prix-medailles…
November 24, 2024 at 11:41 AM
Félicitations à @FriedGuillaume, lauréat du prix Jean Dufrenoy pour ses travaux sur la flore des agrosystèmes et les plantes exotiques envahissantes !
academie-agriculture.fr/prix-medailles…
academie-agriculture.fr/prix-medailles…
November 24, 2024 at 11:40 AM
Merci Mme la Ministre @sretailleau @sup_recherche pour la visite ce matin du @CBGPMontpellier : l'occasion de présenter nos recherches sur les ravageurs de cultures et les réservoirs de zoonoses @INRAE_France @Cirad @ird_fr @Supagro @IsiteMUSE #biodiversite #ecologie #evolution
November 24, 2024 at 11:40 AM
Merci Mme la Ministre @sretailleau @sup_recherche pour la visite ce matin du @CBGPMontpellier : l'occasion de présenter nos recherches sur les ravageurs de cultures et les réservoirs de zoonoses @INRAE_France @Cirad @ird_fr @Supagro @IsiteMUSE #biodiversite #ecologie #evolution
La ministre de l'@sup_recherche, Sylvie Retailleau visitera @EcotronCNRS @CBGPMontpellier @isemevol à Montpellier ce lundi 18 juillet @CNRS @INRAE_France @ird_fr @Cirad @Supagro @umontpellier @IsiteMUSE
: via @Midilibre
midilibre.fr/2022/07/13/la-…
: via @Midilibre
midilibre.fr/2022/07/13/la-…
November 24, 2024 at 11:40 AM
La ministre de l'@sup_recherche, Sylvie Retailleau visitera @EcotronCNRS @CBGPMontpellier @isemevol à Montpellier ce lundi 18 juillet @CNRS @INRAE_France @ird_fr @Cirad @Supagro @umontpellier @IsiteMUSE
: via @Midilibre
midilibre.fr/2022/07/13/la-…
: via @Midilibre
midilibre.fr/2022/07/13/la-…
TRIBUNE. Crises environnementales : 1 400 scientifiques appellent les candidats à la présidentielle et les médias à sortir "des discours de l'inaction" via @franceinfo
francetvinfo.fr/monde/environn…
francetvinfo.fr/monde/environn…
November 24, 2024 at 11:40 AM
TRIBUNE. Crises environnementales : 1 400 scientifiques appellent les candidats à la présidentielle et les médias à sortir "des discours de l'inaction" via @franceinfo
francetvinfo.fr/monde/environn…
francetvinfo.fr/monde/environn…
En rouge et noir, la génétique des pois de la coccinelle : par Arnaud Estoup, Mathieu Gautier (@CBGPMontpellier @InraMontpellier @inra_France @INRAspe) et J. Yamaguchi & @benprudhomme1 (@ibdm @cnrs) via @FR_Conversation
theconversation.com/en-rouge-et-no…
theconversation.com/en-rouge-et-no…
November 24, 2024 at 11:40 AM
En rouge et noir, la génétique des pois de la coccinelle : par Arnaud Estoup, Mathieu Gautier (@CBGPMontpellier @InraMontpellier @inra_France @INRAspe) et J. Yamaguchi & @benprudhomme1 (@ibdm @cnrs) via @FR_Conversation
theconversation.com/en-rouge-et-no…
theconversation.com/en-rouge-et-no…
Measuring Genetic Differentiation from Pool-seq Data: the first PhD paper by @v_hivert (@INRAspe @Inra_France) is now published in @geneticsGSA! #popgen @pooledseq
genetics.org/content/210/1/…
genetics.org/content/210/1/…
November 24, 2024 at 11:39 AM
Measuring Genetic Differentiation from Pool-seq Data: the first PhD paper by @v_hivert (@INRAspe @Inra_France) is now published in @geneticsGSA! #popgen @pooledseq
genetics.org/content/210/1/…
genetics.org/content/210/1/…
The Genomic Basis of Color Pattern Polymorphism in the Harlequin Ladybird: now online @CurrentBiology by M. Gautier & A. Estoup (CBGP @inra_France @INRAspe), and J. Yamaguchi & @benprudhomme1 (@ibdm @cnrs)
cell.com/current-biolog…
cell.com/current-biolog…
November 24, 2024 at 11:39 AM
The Genomic Basis of Color Pattern Polymorphism in the Harlequin Ladybird: now online @CurrentBiology by M. Gautier & A. Estoup (CBGP @inra_France @INRAspe), and J. Yamaguchi & @benprudhomme1 (@ibdm @cnrs)
cell.com/current-biolog…
cell.com/current-biolog…
The genomic basis of colour pattern polymorphism in the harlequin ladybird: a fruitful collaboration between M. Gautier & A. Estoup (CBGP @inra_France @INRAspe), and J. Yamaguchi & @benprudhomme1 (@ibdm @cnrs)
biorxiv.org/content/early/…
biorxiv.org/content/early/…
November 24, 2024 at 11:39 AM
The genomic basis of colour pattern polymorphism in the harlequin ladybird: a fruitful collaboration between M. Gautier & A. Estoup (CBGP @inra_France @INRAspe), and J. Yamaguchi & @benprudhomme1 (@ibdm @cnrs)
biorxiv.org/content/early/…
biorxiv.org/content/early/…
Our #popgen paper with IBC postdoc Florian Clemente is out in @PLOSGenetics: Inferring sex-specific demographic history from SNP data
journals.plos.org/plosgenetics/a…
journals.plos.org/plosgenetics/a…
November 24, 2024 at 11:39 AM
Our #popgen paper with IBC postdoc Florian Clemente is out in @PLOSGenetics: Inferring sex-specific demographic history from SNP data
journals.plos.org/plosgenetics/a…
journals.plos.org/plosgenetics/a…