RdRp Summit
@rdrpsummit.bsky.social
A discussion-centric event that aims to foster reproducibility, collaboration & interoperability in omics-derived RNA virus discovery. 2nd RdRp Summit - May 11 & 12 2025. RdRp.io
You can read about BVFD here doi.org/10.1093/nar/...
May 12, 2025 at 10:53 AM
You can read about BVFD here doi.org/10.1093/nar/...
Lucaprot increases the known diversity of RNA viruses!
www.cell.com/cell/fulltex...
www.cell.com/cell/fulltex...
Using artificial intelligence to document the hidden RNA virosphere
A deep learning algorithm (LucaProt) that integrates both sequence and predicted structural
information was employed to identify highly divergent RNA viral “dark matter” in 10,487
metatranscriptomes f...
www.cell.com
May 12, 2025 at 10:31 AM
Lucaprot increases the known diversity of RNA viruses!
www.cell.com/cell/fulltex...
www.cell.com/cell/fulltex...
Searching through uncharacterized proteins to find endogenous viral elements. You can read all about it here- doi.org/10.1101/2024...
Uncovering hundreds of exogenous and endogenous RNA viral RdRp sequences amongst uncharacterised sequences in public protein databases
Public databases of protein sequences, such as the National Center for Biotechnology Information (NCBI) Protein repository and UniProt, contain millions of proteins identified in samples from specific...
www.biorxiv.org
May 12, 2025 at 9:08 AM
Searching through uncharacterized proteins to find endogenous viral elements. You can read all about it here- doi.org/10.1101/2024...
Wanna read the Logan preprint? You can do it here!
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
Logan: Planetary-Scale Genome Assembly Surveys Life’s Diversity
The NCBI Sequence Read Archive (SRA) is the largest public repository of DNA sequencing data, containing the most comprehensive snapshot of Earth’s genetic diversity to date. As its size exceeds 50.0 ...
www.biorxiv.org
May 12, 2025 at 8:48 AM
Wanna read the Logan preprint? You can do it here!
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
You can find RdRpCATCH here
github.com/dimitris-kar...
github.com/dimitris-kar...
GitHub - dimitris-karapliafis/RdRpCATCH: A community effort to create a shared resource for HMM-based RdRp discovery
A community effort to create a shared resource for HMM-based RdRp discovery - dimitris-karapliafis/RdRpCATCH
github.com
May 11, 2025 at 4:51 PM
You can find RdRpCATCH here
github.com/dimitris-kar...
github.com/dimitris-kar...
We were happy to have you here with us. Definitely looking forward to the MIUVIG2 and happy to brainstorm as a community together! :)
May 11, 2025 at 4:39 PM
We were happy to have you here with us. Definitely looking forward to the MIUVIG2 and happy to brainstorm as a community together! :)
You can read all about their study here -
rdcu.be/elzZI
rdcu.be/elzZI
Detection of viral sequences at single-cell resolution identifies novel viruses associated with host gene expression changes
Nature Biotechnology - A workflow using conserved amino acid domains identifies viruses in sequence data at single-cell resolution.
rdcu.be
May 11, 2025 at 4:30 PM
You can read all about their study here -
rdcu.be/elzZI
rdcu.be/elzZI