Patrick Bryant
patrickbryant1.bsky.social
Patrick Bryant
@patrickbryant1.bsky.social
Assistant Professor at Stockholm University.
Dedicated Scientist.
This is the first study from my lab - providing the first PoC for both linear and cyclic untargeted binder design! EvoBind is available here: github.com/patrickbryan...
GitHub - patrickbryant1/EvoBind: In silico directed evolution of peptide binders with AlphaFold
In silico directed evolution of peptide binders with AlphaFold - patrickbryant1/EvoBind
github.com
July 22, 2025 at 11:23 AM
We have much more coming in this space where we can identify target interfaces and inhibit the interactions - all using protein structure prediction!
July 6, 2025 at 8:02 AM
The WT binder is 1.8 uM which means that we create as good binders but with new modes of binding for a target where these NCAA interactions are completely unknown 😎
May 25, 2025 at 8:04 PM
Thanks! We will release a lot of new tech this year - stay tuned! We are only in the beginning of protein design I think
May 25, 2025 at 8:02 PM
There is also an audio summary generated by Science Cast here: sciencecast.org/casts/4kj8lr...
Science Cast
Increase your recognition in the scientific world with short video-casts
sciencecast.org
May 25, 2025 at 2:11 PM
Just like we have used EvoBind to e.g. create functional HIV inhibitors in a single shot (biorxiv.org/content/10.1...) we can now do this with an expanded vocabulary to have more chemical possibilities and avoid e.g. immune recognition and degradation
May 25, 2025 at 2:11 PM
RareFold supports 49 different AAs.
The 20 regular, and 29 rare ones: MSE, TPO, MLY, CME, PTR, SEP,SAH, CSO, PCA, KCX, CAS, CSD, MLZ, OCS, ALY, CSS, CSX, HIC, HYP, YCM, YOF, M3L, PFF, CGU,FTR, LLP, CAF, CMH, MHO.
You can simply specify which you want to use and design!
May 25, 2025 at 2:11 PM