Fantin Mesny
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mesny.bsky.social
Fantin Mesny
@mesny.bsky.social
Post-doctoral researcher in the group of Prof. Marcel van der Heijden (University of Zürich, Switzerland).

Fungal biology | Soil & plant microbiota | Ecology & evolution | Plant-microbe-microbe interactions | Genomics | ...
Thanks a lot Ren! Happy you like it.

It was nice to see you at MPMI ☺️too bad we did not have the opportunity to talk more.
August 16, 2025 at 11:51 AM
Many thanks to @teamthomma.bsky.social for inspiring discussions and to all co-authors for their important contributions: @alvalentinawolf.bsky.social, @antonkraege.bsky.social, @wolki95.bsky.social, @jinyi-zhu.bsky.social, @yukiyosato.bsky.social and others not on @bsky.app.
August 15, 2025 at 7:47 AM
So, many effectors have ancestral antimicrobial properties. These were retained over evolution while host manipulation traits evolved. Today, they can still function to antagonize competitors and, thus, they have dual functions.
August 15, 2025 at 7:47 AM
Are the antimicrobial properties still relevant? Using a gnotobiotic system, we show that the Vd424Y effector contributes to colonization in presence of a plant-associated microbiota.
August 15, 2025 at 7:47 AM
One of the 5 effectors, Vd424Y, carries a nuclear localization signal necessary for immunomodulation in planta. The NLS was only acquired recently. Thus, plant-colonizing fungi repurposed antimicrobials to suppress host immunity.
August 15, 2025 at 7:47 AM
Strikingly, among most conserved antimicrobials, many effectors previously shown to manipulate plant immunity occurred. We selected 5 and all of them antagonized microbial growth in vitro!
August 15, 2025 at 7:47 AM
The broad conservation of fungal antimicrobials suggests ancient origins. Of course, fungi roamed the earth and competed with other microbes before land plants or animals existed. Ancient weapons worth keeping during evolution?
August 15, 2025 at 7:47 AM
With AMAPEC, we now analyzed phylogenetically diverse fungi with divergent lifestyles and found that fungi secrete lots of antimicrobials. Interestingly, quite some are widely conserved throughout the Fungal Kingdom.
August 15, 2025 at 7:47 AM
First challenge: how to find novel fungal antimicrobial effectors. To do so, we developed AMAPEC, an accurate predictor of antimicrobial activity tailored to fungal effectors.
More info and links ⬇ bsky.app/profile/team...
Check out our preprint describing the "AMAPEC" tool; an accurate antimicrobial activity predictor for fungal effector proteins designed by the talented postdoc Fantin Mesny!

📄: www.biorxiv.org/content/10.1...
💻: github.com/fantin-mesny...

A short 🧵
August 15, 2025 at 7:47 AM
Fungal effectors are mainly seen as pathogen-secreted proteins that mediate plant colonization by manipulating host physiology (immunity). Recently, some were shown to be antimicrobial & manipulate plant microbiota during infection.
State of the art in this review ⬇ bsky.app/profile/mesn...
NEW REVIEW OUT

Fungal pathogens (in fact, not only fungi and not only pathogens!) manipulate the microbiota of their plant hosts during infection.
We reviewed the processes involved, focusing on effector proteins with selective antimicrobial activities.

www.sciencedirect.com/science/arti...
August 15, 2025 at 7:47 AM
The broad conservation of fungal antimicrobials suggests ancient origins. Of course, fungi roamed the earth and competed with other microbes before land plants or animals existed. Ancient weapons worth keeping during evolution?
August 15, 2025 at 6:42 AM
With AMAPEC, we now analyzed phylogenetically diverse fungi with divergent lifestyles and found that fungi secrete lots of antimicrobials. Interestingly, quite some are widely conserved throughout the Fungal Kingdom.
August 15, 2025 at 6:42 AM
First challenge: how to find novel fungal antimicrobial effectors. To do so, we developed AMAPEC, an accurate predictor of antimicrobial activity tailored to fungal effectors.
More info and links in this thread ⬇ bsky.app/profile/team...
Check out our preprint describing the "AMAPEC" tool; an accurate antimicrobial activity predictor for fungal effector proteins designed by the talented postdoc Fantin Mesny!

📄: www.biorxiv.org/content/10.1...
💻: github.com/fantin-mesny...

A short 🧵
August 15, 2025 at 6:42 AM