If you work with RFdiffusion(1) and ProteinMPNN workflows, you might find my PyMOL extension useful for selecting residues in 3D to freeze in designs. I prefer adjusting settings interactively on the structure instead of typing contigs. It can also generate structures for RMSD calculations.
If you work with RFdiffusion(1) and ProteinMPNN workflows, you might find my PyMOL extension useful for selecting residues in 3D to freeze in designs. I prefer adjusting settings interactively on the structure instead of typing contigs. It can also generate structures for RMSD calculations.