Mat Seymour
@matseymour.bsky.social
Professor at The University of Hong Kong (www.seymourlab.net). I am an eDNA specialist with a background in ecology, biogeography and metacommunity dynamics. My lab focuses on marine and freshwater systems. Associate editor for Environmental DNA
This is very cool
December 6, 2024 at 12:55 AM
This is very cool
It's time consuming, but you can make smaller size request (e.g. order, family) and merge them all afterwards.
December 3, 2024 at 12:22 AM
It's time consuming, but you can make smaller size request (e.g. order, family) and merge them all afterwards.
Yes, they have been mostly ignored in Hong Kong. We've mostly found species that also occur regionally, with ~5-7 entirely new species.
December 3, 2024 at 12:15 AM
Yes, they have been mostly ignored in Hong Kong. We've mostly found species that also occur regionally, with ~5-7 entirely new species.
You can have a look at Gert-jan’s CRABS pipeline for downloading data bases and assigning taxonomy . Works well once you get over the technical hump. The overall pipeline works for self adapting as well. onlinelibrary.wiley.com/doi/10.1111/...
crabs—A software program to generate curated reference databases for metabarcoding sequencing data
The measurement of biodiversity is an integral aspect of life science research. With the establishment of second- and third-generation sequencing technologies, an increasing amount of metabarcoding d...
onlinelibrary.wiley.com
November 30, 2024 at 1:07 AM
You can have a look at Gert-jan’s CRABS pipeline for downloading data bases and assigning taxonomy . Works well once you get over the technical hump. The overall pipeline works for self adapting as well. onlinelibrary.wiley.com/doi/10.1111/...
Great list Nicolas - could you add me as well?
November 22, 2024 at 8:41 AM
Great list Nicolas - could you add me as well?