Is a great paper! I have vague memories of an option that meant you don’t get all the matches (not that you get zero matches), but irrelevant seeing as you’re getting the first hit

@julianparkhill.bsky.social I've added annotation (and sequence) search. It's in a the new release 0.2.0

Thanks! Good idea, I’ll add that to the list of features to implement

You guessed it! Yes, that’s the acronym

TNA is like a “minimal ACT”, but with extra features I’ve always wanted: easy Mac install, handle multi-FASTA files, run BLAST for you, show detailed alignment when zoomed in (SNPs/indels), easy contig revcomp/reordering, save/load to/from one file