KamilSJaron.bsky.social
@kamilsjaron.bsky.social
Biodiversity genomics; reproduction; k-mers; Evolution of species with weird genomes; frequently featuring diptera and collembola; group leader at the Tree of Life, Wellcome Sanger Institute; dysorthographic
Does anyone have a photo of Charles W. Metz by any chance? He originally isolated the Holo2 line of Bradysia coprophila we still use after more than 100 years after their original capture.
November 18, 2025 at 12:21 PM
Does anyone have a photo of Charles W. Metz by any chance? He originally isolated the Holo2 line of Bradysia coprophila we still use after more than 100 years after their original capture.
Great, I like how ToS members took on our branding (look at the shirt and laptop stickers)
August 24, 2025 at 11:38 AM
Great, I like how ToS members took on our branding (look at the shirt and laptop stickers)
“More we study (germ line restricted chromosomes), less we know” — @fjruizruano.bsky.social quotes from #ESEB2025
August 18, 2025 at 2:47 PM
“More we study (germ line restricted chromosomes), less we know” — @fjruizruano.bsky.social quotes from #ESEB2025
Found it :)
August 18, 2025 at 11:54 AM
Found it :)
We are excited to attending #ESB2025 find …
@arf-mln.bsky.social to chat about beetle genomics
@jamesimcc.bsky.social about sedges or springtails evolution
Sam Ebdon about distr. of dominance
Myself about diptera comparative genomics
And all of us to chat about any whacky reproduction #obscuromics
@arf-mln.bsky.social to chat about beetle genomics
@jamesimcc.bsky.social about sedges or springtails evolution
Sam Ebdon about distr. of dominance
Myself about diptera comparative genomics
And all of us to chat about any whacky reproduction #obscuromics
August 16, 2025 at 10:58 AM
We are excited to attending #ESB2025 find …
@arf-mln.bsky.social to chat about beetle genomics
@jamesimcc.bsky.social about sedges or springtails evolution
Sam Ebdon about distr. of dominance
Myself about diptera comparative genomics
And all of us to chat about any whacky reproduction #obscuromics
@arf-mln.bsky.social to chat about beetle genomics
@jamesimcc.bsky.social about sedges or springtails evolution
Sam Ebdon about distr. of dominance
Myself about diptera comparative genomics
And all of us to chat about any whacky reproduction #obscuromics
The k-mer workshop is over. In the Friday 3 hour hackathon, people really showed that you CAN learn k-mers in a week! It's been great. Thanks to all the co-teachers, @connectingscience.bsky.social organising team and all the participants!
June 6, 2025 at 1:50 PM
The k-mer workshop is over. In the Friday 3 hour hackathon, people really showed that you CAN learn k-mers in a week! It's been great. Thanks to all the co-teachers, @connectingscience.bsky.social organising team and all the participants!
5 days left to register for the #k-mer workshop! 🧬 I would strongly recommend for anyone doing large scale biodiversity genomics. tinyurl.com/register-for...
March 6, 2025 at 11:51 PM
5 days left to register for the #k-mer workshop! 🧬 I would strongly recommend for anyone doing large scale biodiversity genomics. tinyurl.com/register-for...
Last two weeks to register for the workshop on #k-mer s in biodiversity genomics 🧬💻! With @connectingscience.bsky.social @katiejenike.bsky.social @rayanchikhi.bsky.social and Gene Myers.
coursesandconferences.wellcomeconnectingscience.org/event/k-mer-...
coursesandconferences.wellcomeconnectingscience.org/event/k-mer-...
February 28, 2025 at 11:20 AM
Last two weeks to register for the workshop on #k-mer s in biodiversity genomics 🧬💻! With @connectingscience.bsky.social @katiejenike.bsky.social @rayanchikhi.bsky.social and Gene Myers.
coursesandconferences.wellcomeconnectingscience.org/event/k-mer-...
coursesandconferences.wellcomeconnectingscience.org/event/k-mer-...
With @katiejenike.bsky.social and a bunch more of our fellow k-mer enthusiasts, we put together a manuscript on k-mers in biodiversity genomics. A guide if you will, that covers k-mers from basics to some really funky stuff...
genome.cshlp.org/content/35/2...
genome.cshlp.org/content/35/2...
February 14, 2025 at 10:20 PM
With @katiejenike.bsky.social and a bunch more of our fellow k-mer enthusiasts, we put together a manuscript on k-mers in biodiversity genomics. A guide if you will, that covers k-mers from basics to some really funky stuff...
genome.cshlp.org/content/35/2...
genome.cshlp.org/content/35/2...
We also did plenty of RNA-seq and found a very promising candidate (histone acetyltransferase Rtt109/CBP) that could be the key for understanding how these chromosomes cheat in male meiosis!
February 1, 2025 at 4:08 PM
We also did plenty of RNA-seq and found a very promising candidate (histone acetyltransferase Rtt109/CBP) that could be the key for understanding how these chromosomes cheat in male meiosis!
We sequenced single B individual with PacBio, no B and 3 B individuals with illumina - using some fun bioinformatics we got reliable set of scaffolds that were core / B / or to our suprise... shared.
February 1, 2025 at 4:08 PM
We sequenced single B individual with PacBio, no B and 3 B individuals with illumina - using some fun bioinformatics we got reliable set of scaffolds that were core / B / or to our suprise... shared.
🚨Registration open🚨 1st - 6th of June, me, Katie Jenike, @rayanchikhi.bsky.social and Gene Myers will run a week long workshop on k-mers for biodiversity genomics organised by @connectingscience.bsky.social at @sangerinstitute.bsky.social. Join us & get equipped to wrestle large genomic datasets!
January 31, 2025 at 3:17 PM
🚨Registration open🚨 1st - 6th of June, me, Katie Jenike, @rayanchikhi.bsky.social and Gene Myers will run a week long workshop on k-mers for biodiversity genomics organised by @connectingscience.bsky.social at @sangerinstitute.bsky.social. Join us & get equipped to wrestle large genomic datasets!
We made a big push towards the new version of #smudgeplot over the last few weeks. The difference is mind blowing!
Interested? Join me on 18th of October at
The BGAcademy24 for the release & the first official tutorial! Free registration: thebgacademy.org
Interested? Join me on 18th of October at
The BGAcademy24 for the release & the first official tutorial! Free registration: thebgacademy.org
September 20, 2024 at 2:49 PM
We made a big push towards the new version of #smudgeplot over the last few weeks. The difference is mind blowing!
Interested? Join me on 18th of October at
The BGAcademy24 for the release & the first official tutorial! Free registration: thebgacademy.org
Interested? Join me on 18th of October at
The BGAcademy24 for the release & the first official tutorial! Free registration: thebgacademy.org
I am delighted to share a preprint of our *Guide to k-mer approaches for genomics across the tree of life*
By Katie Jenike, Lucia Campos-Domínguez, Marilou Boddé, José Cerca, Christina N. Hodson, @mikeschatz.bsky.social & myself.
arxiv.org/abs/2404.01519
By Katie Jenike, Lucia Campos-Domínguez, Marilou Boddé, José Cerca, Christina N. Hodson, @mikeschatz.bsky.social & myself.
arxiv.org/abs/2404.01519
April 3, 2024 at 9:12 AM
I am delighted to share a preprint of our *Guide to k-mer approaches for genomics across the tree of life*
By Katie Jenike, Lucia Campos-Domínguez, Marilou Boddé, José Cerca, Christina N. Hodson, @mikeschatz.bsky.social & myself.
arxiv.org/abs/2404.01519
By Katie Jenike, Lucia Campos-Domínguez, Marilou Boddé, José Cerca, Christina N. Hodson, @mikeschatz.bsky.social & myself.
arxiv.org/abs/2404.01519
Did you miss #smudgeplot on social media? We are steadily progressing in development of the new version with lots and lots new things in there!
March 22, 2024 at 5:14 PM
Did you miss #smudgeplot on social media? We are steadily progressing in development of the new version with lots and lots new things in there!
I was just a few days ago pointed to this, which seems pretty good for sorting them to bigger groups www.nhbs.com/animals-unde...
February 15, 2024 at 8:02 PM
I was just a few days ago pointed to this, which seems pretty good for sorting them to bigger groups www.nhbs.com/animals-unde...