https://www.biorxiv.org/content/10.1101/2024.06.26.600753v1
🔗 Blogpost: https://galaxyproject.org/news/2024-07-08-pathogfair-preprint/

##metagenomics ##pathogen ##usegalaxy (12/12)

🔍 What's in PathoGFAIR?
PathoGFAIR consists of 5 workflows:
- Preprocessing
- Taxonomy Profiling and Visualization
- Gene-based Pathogen Identification with assembly, AMR and VF gene detection
- Allele-based Pathogen Identification with variant calling
- PathoGFAIR Samples Aggregation and (5/12)

https://galaxyproject.org/news/2021-12-08-pathogen-detection-eosc-life-grant/ (4/12)

🏁 Project Origins
The journey began with funding from EOSC-Life for Industry Collaboration to modernize and validate Biolytix's bioinformatic pipelines. The goal? To make pathogen detection workflows accessible and scalable via the Galaxy platform. 🌐

🔗 Project Background: (3/12)

https://www.biorxiv.org/content/10.1101/2024.06.26.600753v1
🔗 Blogpost: https://galaxyproject.org/news/2024-07-08-pathogfair-preprint/ (2/12)

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