jwainaina.bsky.social
@jwainaina.bsky.social
Reposted by jwainaina.bsky.social
🚨NEW paper: Benchmarking Hi-C for virus–host inference
journals.plos.org/plosbiology/...
A clear baseline for anyone mapping virus–host interactions that establishes robust, benchmarked thresholds for Hi-C linkages.
Key results: 👇
journals.plos.org/plosbiology/...
A clear baseline for anyone mapping virus–host interactions that establishes robust, benchmarked thresholds for Hi-C linkages.
Key results: 👇
Benchmarking with synthetic communities provides a baseline for virus-host inferences from Hi-C proximity linking
Virus discovery has accelerated but linking viruses to hosts remains challenging. This study uses synthetic microbiomes to optimize and benchmark Hi-C for virus-host linkage inference, and applies thi...
journals.plos.org
November 21, 2025 at 7:31 PM
🚨NEW paper: Benchmarking Hi-C for virus–host inference
journals.plos.org/plosbiology/...
A clear baseline for anyone mapping virus–host interactions that establishes robust, benchmarked thresholds for Hi-C linkages.
Key results: 👇
journals.plos.org/plosbiology/...
A clear baseline for anyone mapping virus–host interactions that establishes robust, benchmarked thresholds for Hi-C linkages.
Key results: 👇
Reposted by jwainaina.bsky.social
Watch our latest research as a Video Byte about global ocean AMG function and distribution: www.researchsquare.com/article/rs-6...!
From our lab's work in Microbiome (Tian & Wainana et al., 2024:https://doi.org/10.1186/s40168-024-01876-z)
From our lab's work in Microbiome (Tian & Wainana et al., 2024:https://doi.org/10.1186/s40168-024-01876-z)
February 19, 2025 at 5:35 PM
Watch our latest research as a Video Byte about global ocean AMG function and distribution: www.researchsquare.com/article/rs-6...!
From our lab's work in Microbiome (Tian & Wainana et al., 2024:https://doi.org/10.1186/s40168-024-01876-z)
From our lab's work in Microbiome (Tian & Wainana et al., 2024:https://doi.org/10.1186/s40168-024-01876-z)
Reposted by jwainaina.bsky.social
Prokaryotic-virus-encoded auxiliary metabolic genes throughout the global oceans microbiomejournal.biomedcentral.com/articles/10.... #jcampubs 🌊
Prokaryotic-virus-encoded auxiliary metabolic genes throughout the global oceans - Microbiome
Background Prokaryotic microbes have impacted marine biogeochemical cycles for billions of years. Viruses also impact these cycles, through lysis, horizontal gene transfer, and encoding and expressing...
microbiomejournal.biomedcentral.com
August 30, 2024 at 1:27 PM
Prokaryotic-virus-encoded auxiliary metabolic genes throughout the global oceans microbiomejournal.biomedcentral.com/articles/10.... #jcampubs 🌊