Julien Roux
@julienroux.bsky.social
Bioinformatician, Department of Biomedicine @ Uni Basel & Swiss Institute of Bioinformatics
Interested in bulk and single-cell omics, data analysis, experimental design, data visualization, R/Bioc, open science, EDI, etc 🧬 🖥️
Interested in bulk and single-cell omics, data analysis, experimental design, data visualization, R/Bioc, open science, EDI, etc 🧬 🖥️
Spatial omics images? bsky.app/profile/lape...
November 14, 2025 at 7:59 AM
Spatial omics images? bsky.app/profile/lape...
Yes indeed, it is very cell type dependent, I rarely observed T cells with more than 5% mito, while epithelial cells of fibroblast are often above 20%.
I guess this is why the cell atlases are quite lenient when it comes to filtering based on that criterion
I guess this is why the cell atlases are quite lenient when it comes to filtering based on that criterion
December 4, 2024 at 7:36 AM
Yes indeed, it is very cell type dependent, I rarely observed T cells with more than 5% mito, while epithelial cells of fibroblast are often above 20%.
I guess this is why the cell atlases are quite lenient when it comes to filtering based on that criterion
I guess this is why the cell atlases are quite lenient when it comes to filtering based on that criterion
Meeting room window:
23rd of October / 21st of November
23rd of October / 21st of November
November 21, 2024 at 10:24 AM
Meeting room window:
23rd of October / 21st of November
23rd of October / 21st of November