Joshua Hamm
joshnhamm.bsky.social
Joshua Hamm
@joshnhamm.bsky.social
Post-Doctoral Researcher in the EvoSym Group. Investigating DPANN-host interactions.
jnhamm.wordpress.com
Congrats Dani! That's awesome news!
October 23, 2025 at 1:52 PM
August 8, 2025 at 6:49 AM
Our results provide insight into a currently understudied DPANN lineage (Caliditerrarchaeota) and highlight similarities and differences in how DPANN halophiles achieved their tolerance to the hypersaline systems they inhabit.
August 8, 2025 at 6:49 AM
Additionally, using gene trees from ALE analysis, we examined sisterhood rates across all archaea in the dataset. The results confirm higher rates of sisterhood in single gene trees for many DPANN-host pairs and reveal a potential association of Haloaenigmatarchaeaceae with Halarchaeoplasmatales.
August 8, 2025 at 6:49 AM
However, for both lineages the gene with the highest increase in copy number was the Kef type K+ transporter, implicating this system as key in the adaptation to hypersaline environments for halophilic DPANN.
August 8, 2025 at 6:49 AM
The results indicate for the Nanohaloarchaeota and Haloaenigmatarchaeaceae different genes were associated with transition to hypersaline environments. For Nanohaloarchaeota this includes oxygen tolerance and DNA repair systems. For Haloaenigmatarchaeaceae this includes a specific Na+ transporter.
August 8, 2025 at 6:49 AM
Our analysis of public MAGs shows these DPANN are mostly sediment associated thermophiles with no signatures of halophily. We then used gene tree/species tree reconciliations to predict ancestral genome content and compare the two known DPANN halophiles to their last non-halophilic ancestors.
August 8, 2025 at 6:49 AM